Xiphias gladius (swordfish): 120789457
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Entry
120789457 CDS
T07311
Symbol
prdm1c
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120789457 (prdm1c)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
120789457 (prdm1c)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
C2CH-3rd_BIRD-IDD
zf-C2HE
Zap1_zf1
Zf-C2H2_ZNF451
zf-met
Motif
Other DBs
NCBI-GeneID:
120789457
NCBI-ProteinID:
XP_039982118
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Position
LG4
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AA seq
793 aa
AA seq
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MCGSSQGFRASSSSSSQCTTAMLTSERSPQSTGVVTVTTRETQDVDMTSWSEADFEEKCT
YIVKDQPLEQESENHGRTRAERSLPRNLALKRCRNSAEVLGVTSKELIPKGTRFGPLVGE
SYTNEILQTDADRKYFWRVFSEGHLHHILDGLNEERSNWMRYVNPACSVKEQNVVACQSG
LDIYFYTIKPLQLGQELLVWYCPEFAQRCNYPPLGQLAIDSTEQGQDQEKTTGKRGHSVS
EILRAEPSRSLTTCPGRLDSPLSQTGLSAVFPLCPHVVYPIQPNSESIHGRRYSTLPSLP
SSGPPAAKRPALSGPVPSILDFSFQHSQGPVLANPYQEPSVPDRVHPALRHAPFYLPHYS
LGLNSILPHSYPFYSDRLKPHVTLSSHLLPFDGYAHLLHPLANQHKDLILALSSNKQDLI
LSPSREHKDNKDLISNRTDYLRIPLDDLRDFKHSSPSNVHADLTIPATSSASSVVTSLCG
ALPSLAPGGCSPPVGMAASSDCLPSRPTSATQKNTEDAGDLRNTKQGGQIIGYKTLSYPL
TRQNGKIRYECNVCGKVFGQLSNLKVHLRVHSGERPFRCQTCSKNFTQLAHLQKHYLVHT
GEKPHECKVCRKRFSSTSNLKTHQRLHSGERPYQCKLCPARFTQFVHLKLHKRLHTGERT
YQCPRCPCAYLHYCSLQVHLKGFCPLSPSASHRHSPEELHRVNSEIERFDVSDAAEQLEA
MATEAKMDKGKLTDLIQKMESHTSGHQDGARGETELSICKLGQECSGVQLHRSGPLPLHP
ASIKLESNCISEP
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctcctctcagggcttcagagcctcctcctcctcctcctctcagtgcaccaca
gccatgttaacctcagaacggtcaccgcaaagcacaggggtcgtcactgtgacgacgaga
gagacacaggatgtagacatgacatcgtggagcgaggcagactttgaggagaagtgcact
tacattgtgaaggaccaacctctggaacaggagtccgaaaaccacggaaggacaagagct
gagagatccttgcccagaaacctagccctaaaacgctgccgcaactcagcagaggtgctt
ggggtgaccagtaaggagctgattcctaaggggacacgttttggccctctggtgggggaa
agctacacaaatgaaatactgcagacagacgctgacagaaagtacttctggagggtcttc
tcggagggacacctacaccacatcctggacggtttgaacgaggagcggagcaactggatg
cgctacgtcaacccagcctgttctgtgaaggagcagaacgtggttgcgtgccagagcggc
ttggacatctacttctacacaatcaaaccccttcagctgggccaggaactgcttgtgtgg
tactgccctgaattcgcccagcgctgtaactaccctcccctgggccaactggctattgac
agtaccgaacagggtcaagatcaggagaaaacgacggggaaacgaggacacagcgtctcg
gaaatcctccgagccgagccctcccgatccctgactacctgccccggacgtctggacagc
cctttgtctcagaccggcctctcagcggtttttcccttgtgtcctcacgttgtctaccca
atccagcccaactctgaatctatccatggccgtagatattcaactctgccatccctacca
tcctccggccccccagctgccaaaaggccagcactaagtggtcctgtcccctctattttg
gacttcagctttcagcacagccaaggccctgttttagcaaacccttaccaagagccctct
gtgcctgacagagttcaccctgctctgaggcacgctcccttttatctccctcactactca
cttggccttaacagcattctacctcattcataccctttctacagtgatcgactgaaacct
cacgtaacactctcctcccatttgctgcctttcgacggctacgcacacctcctccatcct
ctagccaaccaacacaaagacttgatacttgcactatccagtaacaaacaagacctcatt
ctttcaccaagccgtgaacacaaagacaacaaggacctcatatccaataggacagactac
ctcaggatccccttagatgacctcagagatttcaaacactcttctcctagcaatgtccat
gcagacctcacaatacctgccacatccagcgcctcatccgtggtcacctccctctgtgga
gcactgccctctcttgcccccggaggatgctcaccaccagtgggcatggctgcctcctca
gactgcctcccttccagacccacctctgctactcagaaaaatactgaggatgcgggtgac
ctcaggaataccaagcaaggaggacagatcattggctacaagactctgtcttaccctctc
accaggcagaatggaaagatccggtatgagtgcaacgtctgcggaaaggtctttgggcag
ctgtcgaacctcaaggtccacctgcgagtacacagcggagagcgtcccttcaggtgtcag
acgtgtagtaaaaacttcacacagctggcccacttgcagaaacactacctggttcacaca
ggagagaaaccacatgaatgcaaggtgtgccgtaaacgattcagtagcaccagtaacttg
aagacccaccagaggctacactcaggtgagaggccttaccagtgcaaactctgcccagcc
cgcttcactcaattcgtccacctcaagctccacaaacgcctccacaccggggaacgaact
tatcagtgtccccgctgtccctgtgcctatctccactactgcagtctccaggtgcacctc
aagggcttctgtcctctctccccctcggcgtcccacagacactcgccagaggagctacac
cgagtgaactcggagatcgagaggtttgacgtgagcgacgcggcagagcagcttgaggcc
atggctaccgaggccaagatggataaggggaaacttaccgacctaatacagaagatggag
tctcacacctcgggccaccaggatggcgccagaggggagactgagctgagcatctgcaaa
ttagggcaggagtgttctggtgttcagctgcatcgtagcggccctctacctctgcaccca
gccagcatcaagctggagtcaaactgcatatcagagccctaa
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