Xiphias gladius (swordfish): 120789632
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Entry
120789632 CDS
T07311
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xgl04040
]
120789632 (trpc1)
Ion channels [BR:
xgl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120789632 (trpc1)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
120789632
NCBI-ProteinID:
XP_039982389
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Position
LG5:14844657..14859484
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AA seq
796 aa
AA seq
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MHISAWPHSLSFVMAALYQGTDASSPDKFLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEENRHGELNINCVDVLGRDAVTITIENENLDILQLLLEHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELSA
DLKELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSNEDHVDKRGLLE
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGETASYRRKHTCLKMGTVLSVAVLWP
LLSVCYLLVPRSRVGQIIHTPFVKFIIHSASYFTFLLLLNLYSLVYNEGKKNTMGPALEM
IDYLLILWIIGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFAIKIVAHSKFKN
VEDTERKNWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKF
LGLFLLVLFSFTIGLTQLYGKDQKDPDKNPPNDCEGIFCQQQSNDAFHTFIGTCYALFWY
IFSLAHVALFVTRISYTEELRSFVGAMIIGTYNIVVVIVLTKLLVAMLHKSFRQIANHED
KEWKFARAKLWLSYFDDKCTLPPPFNILPSPKTVCYLVTSMSKWICSHTSKGKVKRQNSL
KEWRNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNEMRD
LLGFRTSKYAMFYPRS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgcttggccgcactcgctctccttcgtaatggcagctctgtaccagggc
acggacgcttcctctccggataaatttctggccttgaaagacgtgagagaggtgaaggag
gaaacgacgctggatgagaagcttttcttgctggcatgcgagaaaggtgactactacatg
gtgaagaaactgctcgaggagaaccgacacggcgagctcaacatcaactgcgtagacgtg
ctgggccgagacgccgtgaccatcaccattgagaacgagaatctagacatcctgcagctt
cttctggaacatggctgccaggcgacagatgccttgttggtggccatagactcggaggtg
gtgggagctgtggacatcctcctcaaccacaggccaaggcgatcttccaagccctccatt
gctaaactgatgcagcggattcagaacccagagtactccaccaccatggatgtggctcca
gtcatcctggcagcccacaggaacaactacgagatcctgactatgctgctgaaacaggac
atctcgcttccccgaccccatgctgtaggctgcgagtgcacgctctgcaacgctaaaaac
aagaaggacagcttacggcactccaggttccgtctggacatctaccggtgcctggccagc
ccctctctgatcatgctgacagaggaagatcccatactcagggcctttgagctgagtgca
gacctcaaggagctcagtctggttgaggtggagttcaggaatgactatgaggagctggcg
aagcagtgtaagatgtttgccaaggacctgctggctcaggctcgaaactcgagagagctt
gaagttattctcaatcacacatccaacgaagatcacgttgacaagagagggttactggag
gagcgcatgaacctcagccgacttaaactagccatcaagtacaaccaaaaagagtttgtg
gctcagtccaactgtcaacagttcctcaacactgtctggtttggagagacggctagctac
cggcgcaaacacacctgtctaaagatgggcacagtactgagcgtagcggtgctttggcca
ctgctttctgtctgctaccttctggtgccacgttcccgtgtgggccagatcatccacacg
cccttcgtcaagttcatcattcacagcgcctcctactttacattcctgctgctgctcaac
ctctactctctggtctacaatgaaggcaagaaaaacaccatgggccctgcactggagatg
atcgattacctgctcatcctttggatcatagggatggtgtggtcagacgtgaagcgtctg
tggtacgaagggctggaagactttctggaagagtctaggaaccagctgagctttgtgatg
aattccctttacctagccacctttgcgatcaagattgttgctcatagcaagttcaagaat
gtggaggacaccgagagaaagaactgggatgcgttccatcccatcctggtggctgagggc
ctgtttgcctttgccaacgttctcagttacctgcgactcttctttatgtacacaaccagc
tccatactggggccgctgcagatttccatgggtcagatgctgcaggaatttggaaagttt
ttggggctcttcctgctggtgttgttctctttcaccattggactaacccagctttatgga
aaggaccagaaagacccagacaagaatccacccaatgactgcgagggcatcttctgccag
caacagagcaatgatgcattccacacgtttatcgggacctgctatgccctgttctggtac
atcttctccctggcacacgttgcgctctttgtcacccgcatcagctacacagaggagctg
cggtcttttgtgggtgccatgatcataggcacctacaacattgtggtggttattgtcctc
accaagctgctggtggcaatgctccataaaagcttcagacagattgctaatcacgaggat
aaggagtggaagtttgctcgggccaaactgtggcttagctactttgatgataagtgtacc
ctgccaccaccgttcaatattctcccctctccaaagactgtgtgctacttggtgaccagc
atgagcaagtggatctgttcacatacttcgaagggcaaggtgaagagacagaacagccta
aaagagtggaggaacctgaagcagaagcgtgatgagaactaccagaagatcatgtgttgt
ctagttcaccgctacttgacctccacgcggcaaaagatgcaaagcacagaccaggccacg
gtggaaaatctgaacgacctacgccaagacctatctaagtttcgcaacgagatgagggac
ctgctgggcttccggacatccaaatatgccatgttctacccaaggagctaa
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