Xiphias gladius (swordfish): 120789717
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Entry
120789717 CDS
T07311
Symbol
arfgef1
Name
(RefSeq) LOW QUALITY PROTEIN: brefeldin A-inhibited guanine nucleotide-exchange protein 1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120789717 (arfgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120789717 (arfgef1)
Membrane trafficking [BR:
xgl04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
120789717 (arfgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
120789717
NCBI-ProteinID:
XP_039982586
LinkDB
All DBs
Position
LG5:12921484..12972796
Genome browser
AA seq
1954 aa
AA seq
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MFEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKEESEKLSPPSGDGKS
GSSTLPPIKSKTNFIEADKYFLPFELACQSKCPRIVITSLDCLQKLIAYGHLTGSAPDST
APGKKLIDRIIETICACFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALTNHKLSWSLASRKRDRQLQEAKQLER
ERHRQHSPVTQHTEPDSPQLQTHIHPPAKGPTQEANGPITPPTPSITIPSTPSTPSTPAT
DGSSKSVSGEQEEQEEXGEQGEQGEQGPIYESPDPENGSDFCVAENEQTEADQATAAAQN
AAAQQQPEASEEDEETPNYEEKAQEIVQSILQEVVNTVAGGHCLDPANLCSDTKESGGEV
EPAESEPAEAVTEGTQSSLEDEGTVGSDSEHVHANGIPGTPISASFTPSLPDDRLSVSSN
DTQESGAAPGQPPGAKFSHILQKDAFLVFRSLCKLSMKPLSDGPPDPKSHELRSKVLSLQ
LLLSILQNAGPIFKTNEMFINAIKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSNFKTH
LKMQIEVFFKEIFLYILETSTSSYDHKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANI
FERLVNDLSKIAQGRGGHELGTTPVQELTLRKKGLECLVSILKCMVEWSKDQYVNPNSQT
SLGQEKPSEQESAETKAPETINRYGSINSLDSTASSGIGSYSTQMSGTDNPEQFEVLKQQ
KEIIEQGIDLFNKKPKRGIQYLQEQGMLGTTPEDLAQFLHQEERLDSTQVGEFLGDNDRF
NKEVMYAYVDQMDFQGKDFVSALRMFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLF
ASADTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYDEIA
GKKIAMKETKELTMKSNKQSVASEKQRRLLYNLEMEQMAKTAKALMEAVSHVQAPFTSAT
HLEHVRPMFKLAWTPFLAAFSVGLQDCDDTEVASLCLEGIRCAIRIACIFSIQLERDAYV
QALARFTLLTASSGISEMKQKNIDTIKTLITVAHTDGNYLGNSWHEIMKCISQLELAQLI
GTGVKARYISGTVRGKEGFVASTKEQNNDEYLGLVGGTVDRKQIASIQESIGETSSQSVV
VAVDRIFTGSTRLDGNAIVDFVRWLCAVSMDELASPTHPRMFSLQKIVEISYYNMGRIRL
QWSRIWEVIGDHFNKVGCNSNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEH
IMKKNRSPTIRDMVVRCIAQMVNSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTG
HIVTNVFEKHFAATIDSFQDAVKCLSEFACNASFPDTSMEAIRLIRHCAKYVSERPQAFK
DYTSDDMNVAPEDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEVMKTYGHTFEKH
WWQDLFRIVFRIFDNMKLPEQQTEKAEWMTTTCNHALYAICDVFTQYFESLNDVLLDDIL
AQLYWCVQQDNEQLARSGTNCLENVVILNGEKFSPETWDKTCNCMLDIFKTTIPHALLTW
RPAGEGGEHLTIQSLSDKQLDSISQKSVDIQSRTDDQHSISSADRVAMENRRQSQYISAS
GMCEDGSRSRTPTKVQEQHLFSALLIKCVVQLELIQTIDNIVFFPATSKKEDAENFAAAQ
RDAVYAVPVETQDQGMYRYLTSEQLFKLLDCLLESHRFAKAFNSNNEQRTLLWKAGFKGK
SKPNLLKQETSSLACGLRILFRMYTDESRQDAWAEVQRRLLNVCSEAVGYFLALTSESHR
EAWTNLLLLFLTKVLKISDERFKAHASRYYPLLCEIMQFDLIPELRAVLRKFYLRIGLVF
NISQLDESEAEPQPTHVEQETDTEVGEEAGEEAQ
NT seq
5865 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagggcaaaaagacgaaaaacatgttcctcacacgagctttggaaaagatcttg
gccgacaaggaggtgaaaaaggctcaccattcacaactgcgcaaagcctgcgaggtggca
ctcgaggaaatcaaagaggaatcagaaaaattaagcccacccagtggagatggcaaatct
ggttccagcactttaccaccaatcaaatcaaagaccaactttattgaagccgacaagtac
ttcttgccgtttgagctggcatgtcagtccaaatgtccccgcattgtcatcacctcgctc
gactgtttacagaagctgatagcatacggccatctgacaggcagcgccccggacagcacg
gccccaggcaagaagctcatcgacaggatcatagagacaatctgtgcttgtttccaaggg
ccgcagactgatgagggcgtccagctacagattattaaggctctgttgacagcagtaacc
tctcagcacatagaaatccatgagggaaccgtcctgcaggccgtccgcacgtgttacaac
atctacctggccagcaagaacctcatcaaccagaccacagcaaaggccacgctcacacag
atgctcaacgtcatctttgcacgcatggagaatcaagcacttacaaatcacaagctatct
tggtctctggcctccagaaagcgtgaccgccagctgcaggaagcaaagcagctggagaga
gagcggcaccggcagcactccccagtcacccagcacactgagccagactcccctcagctc
cagactcatatccacccaccggccaagggtccaacccaggaggccaatgggcccatcacc
cctccaactcccagcattaccatcccgtccaccccgtccaccccctcgacaccggccacg
gacggcagcagcaagtctgtgtctggggagcaggaggagcaggaggagncaggagagcag
ggagagcagggagagcaggggcccatctacgagagcccagatccagaaaacggttctgat
ttctgcgtggctgaaaatgaacaaactgaggcagaccaagctactgcagcagcacagaat
gcagcagcccagcagcaaccagaggcaagtgaggaggacgaggagaccccaaactatgag
gagaaagcccaggaaatagtccagagtattctgcaggaggttgtcaatactgttgcagga
gggcactgcctggacccagcgaacctctgctctgacacgaaggagtctggtggcgaggtt
gagccggccgagtcagagccggctgaagcagtaacagagggcacccagagttccctggag
gacgaaggcaccgtgggtagcgacagtgagcacgtccatgccaacgggatccccggcacg
cctatttctgccagcttcaccccctcgctgcctgatgacagactgtctgtctcatccaat
gacactcaggaatcaggagcagcaccgggtcagccaccaggtgctaaattctcccacatc
ctccagaaagatgccttccttgtatttcgctctctctgcaagctgtcaatgaagccactg
tcagatggaccacctgatcctaagtctcatgagctgcgatcgaaggtcttgtccctccag
ctgctgctctccatcctgcagaacgccggacccatcttcaagaccaacgagatgttcatc
aatgccatcaagcagtacctttgtgtggccctgtccaagaatggtgtctcctccgtgcct
gaggtcttcgaactctcactatctattttcctcactctgctctccaacttcaagacacac
ctcaagatgcaaatcgaggtgttcttcaaggagatttttctgtacattcttgagacgtcc
acaagctcctatgaccacaagtggatggtcatacaaaccctcactagaatatgtgcagat
gcccagagtgtggtggacatctacgtgaactatgattgtgacttgaatgctgctaacata
tttgagcgtttggtcaacgacctctcgaaaattgcacagggccgtgggggccatgagctt
ggcacaacgccagtacaggagttgaccctgagaaagaaaggccttgaatgtctagtgtcc
atccttaaatgtatggtcgagtggagtaaagaccaatacgtcaaccccaactcccagacc
agtctcggccaagagaaaccatcagagcaggagagcgcagagaccaaggctcctgagacc
ataaaccgctatgggagcattaactctctggactccacagcgtcatctggcattggcagc
tacagcacccagatgtcaggtactgacaaccctgagcagtttgaggtcctcaaacagcaa
aaggagatcatcgagcagggcattgacctattcaacaagaaaccaaagagaggaatccag
taccttcaagagcaaggcatgctcggtacaaccccagaagaccttgcacagttcttgcac
caggaagagaggcttgattcgacccaagtgggagagttccttggggataatgaccgtttc
aataaagaggtgatgtacgcctatgtggatcaaatggacttccagggcaaagactttgtt
tctgctctaaggatgttcttggagggctttaggctccctggagaggcccagaagatcgac
cggctcatggagaaatttgcagcaagatatttggagtgcaatcaggggcaaaccctcttt
gccagtgctgacaccgcatacgtccttgcctactcaatcattatgttgacaacagacctt
cacagtcctcaggtgaagaataaaatgacaaaagagcaatacatcaagatgaaccgtggc
atcaacgacagcaaagacctacctgaggaatatctctcagccatctatgacgagattgcg
gggaaaaagattgccatgaaggaaacaaaagagctcaccatgaaatccaacaagcagagt
gtggccagtgagaagcagaggcgtctgctgtacaacttggagatggagcagatggccaag
acggccaaagctctgatggaggccgtcagccacgtccaggctcccttcaccagcgccaca
cacctggagcatgtcaggcccatgttcaagctggcgtggacacccttcctggctgctttc
agtgtgggtcttcaggactgtgacgacactgaggtggcctctctgtgtcttgaaggcatc
cgttgtgccatcaggatagcgtgcatcttctccatacagttggagagggatgcatatgtc
caggccctggcgaggttcaccctgctgacagccagctctggcatctcagaaatgaaacag
aagaacatcgacaccatcaagaccctcatcactgtggcccacactgatggcaactacctg
ggcaactcctggcatgagatcatgaagtgcatcagtcagttggaactggcacagctgatc
ggtacgggggtgaaggcgcgctacatctcagggacagtgcggggcaaagagggctttgtt
gcaagtaccaaggagcagaacaacgatgagtacctgggtctagttggagggacagtggac
cgtaagcagattgccagcattcaggaatccattggcgagaccagctctcagagtgtagtg
gtagctgttgacaggatattcacaggttctaccagactggatggtaatgcaatagttgat
tttgtgcgctggttgtgtgctgtgtccatggatgagctggcctcgcccacacacccacgt
atgttcagcctgcaaaaaatagtcgagatctcctactacaacatgggccgcatccggctg
cagtggtccaggatctgggaggttatcggagaccacttcaacaaggttggctgtaattcc
aatgaagatgtggcaatttttgcagtggactctctcaggcaactgtccatgaaatttttg
gagaagggggagctggctaacttcagattccagaaagacttcctgaggccttttgagcac
atcatgaaaaagaacaggtcccccactatcagagacatggtggtgcgctgcatagcccag
atggttaactcccaggcggcaaacatccgctcaggctggaagaatatcttctctgtcttc
cacctggctgcctcggaccaggatgagagcattgtagagctggcctttcagaccactggc
catatcgtcacgaatgtatttgaaaagcactttgcagccaccatcgactccttccaggat
gccgttaagtgtctgtcggagtttgcctgtaatgcctccttcccagacacaagcatggaa
gccatccgcctcatccgacactgcgccaaatacgtctcagagaggccacaggccttcaaa
gactacaccagcgatgacatgaatgtagcgcctgaggaccgtgtgtgggtgcggggatgg
ttccccattctcttcgagctctcctgcatcatcaacaggtgtaagctggatgtcaggacc
agggggctaacagtgatgtttgaagtgatgaagacctacgggcacacctttgaaaaacac
tggtggcaagacctgttcagaatcgtcttcaggatctttgacaacatgaagctgcctgag
caacagactgagaaagcagagtggatgaccaccacctgcaaccatgcactttatgccatc
tgtgatgtcttcacccaatactttgagtccctcaatgacgtcctgctggatgacattctg
gctcagctctattggtgtgtgcagcaagataatgagcagcttgcccgttcaggcaccaac
tgtctagagaatgtggtcatcctgaacggagagaagttttcccctgagacctgggacaag
acgtgtaactgcatgctagacatcttcaagaccaccatcccacatgcgctgttaacatgg
agaccagcaggagaagggggagaacacttgacaatacagagcctgtcagacaaacagttg
gactccatttcccagaagtcagtggacatccagtcccgcactgacgaccaacattcaatc
agtagtgctgatagggttgccatggagaaccgtcggcagagtcagtacatctcagcctca
ggcatgtgtgaggacggctccaggagcaggactccaacaaaggtccaggagcagcacttg
ttctcagctttgctgataaagtgtgtcgtacagctggagctcatccagacaattgataac
atcgtgttttttcctgccaccagtaagaaggaagacgctgagaactttgctgctgctcag
cgggacgctgtatatgcagtcccagtggagacccaggaccaagggatgtatcgctacctg
acttctgagcagctcttcaagctgctagactgcctgctggagtcccaccgcttcgccaaa
gctttcaactcaaacaacgagcagagaactttactgtggaaagcaggtttcaaaggaaag
tcaaagcctaacctgttgaagcaggagaccagcagcctggcctgtggcctgcgcatcctg
tttcgtatgtacacagatgagagccgccaagacgcctgggcggaggtccagagacgactg
ctcaatgtgtgcagtgaggctgttggctacttcttggccctgacgtcagagagccacaga
gaggcctggaccaacctgctgctgctcttcctcaccaaggtgctaaagatcagtgatgaa
aggttcaaggctcatgcgtctagatactaccctctgctgtgtgagatcatgcagttcgac
ctgatccccgagctccgggctgtgctaagaaagttttacctgcgaatcggcctcgtgttt
aacatttcacagctggatgagtctgaagcagagcctcagccgacgcatgtagagcaggag
acagacacagaggtgggagaggaggcaggggaggaggctcagtga
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integrated database retrieval system
