Xiphias gladius (swordfish): 120789833
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Entry
120789833 CDS
T07311
Symbol
irf9
Name
(RefSeq) interferon regulatory factor 9 isoform X1
KO
K04693
interferon regulatory factor 9
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04217
Necroptosis
xgl04620
Toll-like receptor signaling pathway
xgl04621
NOD-like receptor signaling pathway
xgl04625
C-type lectin receptor signaling pathway
xgl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120789833 (irf9)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120789833 (irf9)
04621 NOD-like receptor signaling pathway
120789833 (irf9)
04625 C-type lectin receptor signaling pathway
120789833 (irf9)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120789833 (irf9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120789833 (irf9)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
120789833 (irf9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
IRF-3
Motif
Other DBs
NCBI-GeneID:
120789833
NCBI-ProteinID:
XP_039982825
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Position
LG5:20818872..20831066
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AA seq
440 aa
AA seq
DB search
MAAARMRSTRRLRSWIVEQVSSGKYPGLVWDDEAKTMFRIPWKHAGKQDFRKDEDAAIFK
AWAEFKGKLTDGGQDSPASWKTRLRCALNKSPEFKEVMERAQLDISEPYKVYRLVPFSEQ
GVVVPEKKCREKTTRKSKRRSSELESDDVGHVKQIKMEEVTSQLGAEDALLQSDITVQTE
EPVQQHTTTTIQRDLVDEIRLDVRIEESVPAPQEVQDSFNVEVHYLGQEVLKRQILGTDV
RITYLPSSLIPPTPAALKGRFPRIPLPEPPSTLPAGQELQALFTLLPFMEKGVVLTSTPQ
GVYGKRFCQGRVFWTGPHTTTQGLHKMERNTEPVLLFSKDTFKQQLDHFRSNGGEPPQCG
VTLCFGEELSNTEDPSRKLIIVQVKITLPWAEQQVQNAQSIFESITILQSLASQSPLGEI
TLNLVTVPLSTSEELTCGTL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcgagaatgcgctccactcggagactgcgctcctggatcgtcgagcaggtc
agcagtggaaaatatcccgggctggtgtgggatgacgaggccaaaaccatgttccgcatc
ccgtggaagcatgcggggaaacaggatttccgcaaagacgaggacgctgccatcttcaag
gcgtgggcagagttcaaaggaaagctgacggatggggggcaggacagcccggcctcctgg
aagacccggctgcgctgtgccctcaacaaaagtccagagttcaaggaggtgatggaacga
gcccagctggacatctccgagccgtacaaggtctaccgcctggtccccttcagcgagcag
ggtgtggtggtccccgaaaagaaatgcagagaaaaaacgaccaggaagtcgaaaaggagg
agcagcgaattagagagcgacgacgtcggtcatgtcaagcagataaagatggaggaggtc
acgtctcagctgggtgctgaagatgctctgctgcagagtgacatcaccgtccagacagag
gagcctgttcagcagcacaccaccaccaccatccagagagacttggtcgatgagatcagg
ctggatgtgcggatcgaggagagcgtccctgcccctcaagaagtccaggactccttcaat
gtggaggttcactacttaggacaggaggttctgaaacgtcaaatcctgggcaccgatgtc
cggataacgtacctgccctcctccctcattcccccgacgccggccgccctgaaaggcagg
tttccacgcatccctctgccggagccgccctccacgctgccggccggccaggagctgcag
gcgctgttcaccctgctgcccttcatggagaaaggagtggtgctgacctccacgccgcag
ggagtgtacgggaagaggttctgccaggggcgggtcttctggacggggccgcacacgacc
acacaggggctgcacaagatggagagaaacactgagccggtgctgctcttcagcaaagac
accttcaagcaacagctggaccacttccgttcgaacggtggcgagcctcctcagtgcggc
gtcaccctgtgttttggggaagagctgagtaacactgaggacccatccagaaaactcatc
attgtgcaggtaaagatcactttaccatgggcagagcagcaggtccagaacgctcagtcc
atctttgagtccatcacaatcctccagtccctggccagtcagtctccgctgggagaaata
actctgaacctggtcaccgtgcctttgtcgacgtccgaggagctcacctgcgggactctc
tga
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