Xiphias gladius (swordfish): 120789840
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Entry
120789840 CDS
T07311
Symbol
ube3c
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120789840 (ube3c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120789840 (ube3c)
Enzymes [BR:
xgl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120789840 (ube3c)
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
HECT type E3
120789840 (ube3c)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
DUF3335
Motif
Other DBs
NCBI-GeneID:
120789840
NCBI-ProteinID:
XP_039982840
LinkDB
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Position
LG5:15402775..15430445
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AA seq
1079 aa
AA seq
DB search
MFSFEGDFKTRPKVSLGGASKKEEKASLLHRTQEERRKREDERRRLKNAIIIQSYIRGYQ
DLKRQYAIQRARFDECSTQAGGVQHVLDGPGLCLLSRQLIFFYRQSVDAHRLIWLCQNLV
KHNSQFVKLLVGPQKQTCMFQIKRILGFCCRLLQNCKDDSLNVAVPMRMLEIFSSERTYL
PVIPDANYVASLLEQILHYMVQKGYYRSLYILVNHRLPSSLEYSDAPSIPLASTLLEHIL
KPLHFTYSSCTAGARQFVFAAFTEEFISAPFTEQIFHFFIPALSDLRLSFPFEAFLSSLQ
ATIGSSSAAKSQAPWLFYFVLSAGENCLGSLSEEGLLLYLRALQTLLPLLPVSESSTRPD
VSSDSEDEDDAGIHPPPMQDDSRISVQLITEECVQKLDTKLQTNALLNLVWRDSASEEVF
TMMASICHTLMVQHRLMVPKVRLLYSLAFNARFLRHLWHLITSMTTKMITGSMVPLLQLI
SRGSPMSFEDSNRIIPLFYLFSSLFSHSLISVHDSEFFGHEMEGQTQSSMMPFTLLELVT
LSRCLRDACLGIIKLAYPETKTEHREEYMAAFRSVGVKTNTEVQQRIQTEQKRWVQLFKV
ITNLVKMVKARDIRRPFCPAGHWLSEEVNIRADKVTQLYVPSARHVWRTRRMGRIGPLQS
TLDVGSEPPQLSVSEERHLAILTELPFVVPFEERVKIFQRLIYADKRDVQGDGPFPDGIN
VTIRRNYIYEDAYDKLSPENEPDLKKRIRVHLLNAHGLDEAGIDGGGIFREFLNELLKSG
FNPNQGFFKTTNEGLLYPSPAAEMLVGDSFTRHYYFLGRILGKALYENMLVELPFASFFL
SKLLGTSADVDIHHLASLDPEMYRNLLFLKSYEGDVEELGLNFTVVNNDLGEAQVVELKL
GGKDIPVTTANRIAYIHLVADYRLNKQIRPHCLAFRQGLANVVNLEWLRMFDQQEIQVLI
SGAHVPICLDDLKKFTNYSGGYSATHPVIQIFWEVVEGFTDEEKRKLLKFVTSCSRPPLL
GFKELYPAFCIHNGGTDLDRLPTASTCMNLLKLPEFCDQHLMRNKLLYAIESSAGFELS
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgtttagctttgagggagatttcaagacaagacccaaggtatcacttggaggagcaagt
aaaaaggaagagaaagcatccctgctgcaccgcactcaagaagaaagaagaaaaagagag
gatgaaagaagacgtctgaagaatgccatcatcattcagtcttacatacgtggctaccag
gacttgaaacgacagtatgccatccagagggccaggtttgatgagtgttccacgcaggca
gggggggttcagcatgtcttggacggtcctggtctttgcctcttatcaagacaactcata
tttttctatagacagagtgtggatgcgcatagattgatatggctgtgccagaatctggtg
aaacacaacagtcagtttgtcaagctgttggtgggcccacagaagcagacatgtatgttt
cagattaagaggatcttaggcttctgctgcagactcctgcagaactgcaaggacgacagt
ttaaatgtggcggttcccatgcggatgctagaaatcttttcttcagagagaacctatctt
cctgttattccagatgctaactatgtagcttcattactagagcagattttgcactatatg
gtacagaaaggatactacaggtcgctgtacattctagtgaatcacaggctcccttccagt
ctggagtacagtgatgctccctctatccctctggcaagcacactgttggagcacatcctc
aaacccctgcactttacctactcctcctgcacagcgggcgcaaggcagtttgtatttgca
gccttcactgaggagttcatctcagcaccatttaccgagcagatctttcacttctttatc
ccggcactgtcagatctccgtctctcattcccattcgaggccttcctgagttccctccag
gccaccattggctcgtcctcagcggcaaagagccaggcaccgtggctattttactttgtc
ctctctgcaggggagaactgcttaggctcactgtcagaggagggtctccttctgtacctt
cgggctctgcagacgctgctgccgctgctgccggtgtcagagagcagcaccaggcctgac
gtgagcagcgactcagaggacgaagatgatgctggcatccatccaccacccatgcaggat
gacagtcggatatctgtacagctgatcacagaggagtgtgtccaaaagctggacaccaag
ctgcagactaacgccctgctcaacctggtgtggagggattcagccagcgaggaggttttc
actatgatggcatccatctgtcacacccttatggtgcagcaccgcctcatggtgccaaaa
gtcagacttctgtacagtttagctttcaatgcacgtttcctaaggcatctctggcacctg
ataacttccatgacaactaaaatgatcactggttccatggtgccactgttacagctgatc
tcgcgaggttctcccatgtcgtttgaggactcgaaccgcatcattcccctcttctatctc
tttagctctcttttcagccactcgcttatctccgtgcatgacagcgagttttttgggcat
gaaatggaaggtcagacgcagtcctccatgatgcccttcacgctgttagagttggtgacg
ctgtctcgctgcctgagagatgcgtgtctgggaatcatcaagctggcctaccctgagacc
aaaacggagcacagagaggagtatatggctgccttccgcagtgtgggtgtcaagacaaac
actgaggttcagcagcgtatccagaccgaacagaaacgctgggtacagctgttcaaggtc
atcactaacttggtgaagatggtgaaagctcgcgacatcagacggcctttctgtccagca
ggtcactggctctctgaggaggtcaacatccgagctgataaagtcacccagctgtacgta
ccttctgcaagacacgtgtggagaacgagaaggatgggccgcatcgggccacttcagtca
acacttgatgtcggctcagagcctccacagctgtctgtgtctgaggagagacatctagcc
attctcacagagctccctttcgtggttccctttgaggagcgagtcaagatctttcagagg
ttaatctatgctgacaaacgggacgtgcagggggacgggccattccctgatggtatcaat
gtcaccatcagacgcaactacatctatgaagacgcctacgataaactctctccagaaaac
gaaccagacctgaagaaaaggattagagtccatctgctgaatgctcacggtctagatgag
gcaggcatcgatggtggtggaatcttccgggagttcctcaacgaactcctcaagtcgggc
ttcaatccaaaccagggtttcttcaagactaccaacgagggcctgctgtatcccagcccc
gctgcagagatgctggtcggagactccttcacaagacactactacttcctaggcaggatc
ctcggaaaggcgctgtatgagaatatgttggtggagttgccctttgccagtttcttcctg
tctaaacttctgggaaccagtgcggatgtggacatccaccacctagcctcgctggaccca
gagatgtaccgcaaccttctcttcctcaagagctacgagggtgacgtggaggagctgggc
ctaaacttcactgtggtcaacaacgatctgggagaggctcaggtggttgaacttaagctg
ggaggcaaagacattcctgtgaccacagcaaaccggatagcctacatccatttggtagct
gactacagactcaacaaacagatcaggcctcactgcctggccttcagacagggcctggcc
aatgtggtcaacctggagtggctgcgtatgtttgaccagcaggagatccaggtgctgata
tctggggctcatgtgccaatttgtcttgatgacctgaaaaagttcacaaactactcaggt
gggtactcagcaactcaccctgtcatccagatcttctgggaggtggtcgaaggcttcaca
gatgaggaaaagcgcaagctgctgaagtttgtcaccagctgctccagaccaccactgctg
ggcttcaaggagctttacccagccttctgcattcacaacggtggcaccgacctggaccgt
ttgcccaccgccagcacctgcatgaacctgctcaagctcccggagttctgcgaccagcac
ctgatgaggaacaagctgctgtacgccatcgagtcctccgccgggttcgagctgagctga
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