Xiphias gladius (swordfish): 120789853
Help
Entry
120789853 CDS
T07311
Symbol
zeb1b
Name
(RefSeq) zinc finger E-box-binding homeobox 1b
KO
K09299
zinc finger homeobox protein 1
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120789853 (zeb1b)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
120789853 (zeb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
Homeodomain
zf-C2H2_15
zf-met
zf-H2C2_5
zf-C2H2_16
Zn_SUZ12
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
120789853
NCBI-ProteinID:
XP_039982857
LinkDB
All DBs
Position
LG5:3741047..3789698
Genome browser
AA seq
1102 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNNVLEAGSDSDDEDKLHIVEEEGSLADGADCDSTLPD
DEHPREHCWDRVKEDCVSDGEDDVSTDVLVEEMLQQGDTAVIYPEAPEDEPQRQGTPDAS
VHDENGTPDSFSQLLTCPYCARGYKRYSSLKEHIKYRHEKTEESFSCPECSYSFAYRAQL
ERHMTVHKGGRDQRHITQSGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECSNCKK
RFSHSGSYSSHISSKKCISVISVNGRPRLGNTKTQTQGPSPVMPTPPSVLRTQIREKLEH
SKPLQEQLPLNQIKTEPVDYEYKPTVITSPAVTAMNGGVFNGGAAAPLQGTVQAVVLPTV
GLVSPISINLADLQNALKVAVDGNVIRQVLENNAKGQGQVNSGLNTGMLHPPQQQLISAI
SLPIVGQDGNAKIIINYSLDQGQLTAQNLKKEPEPVSPAQTTTDNFKSQKLPEDLTIRGT
RSNETKEKEEKTTKTCLLCDNCPGGLESLHALKHCKKDGLRLNGTGLDKSESAVAALLSE
GGLCNQPKNLLSLLKAYFALNAEPTKEELAKISDSVSLPIHVVKKWFDKMQEGQISLGAP
TPPSEEEDTCEVNSVVSLVPGKDTSTVIPSTTQDSPTEATPAEINGAHSSPTSPSPLNLT
AGGPVPAQPPQSTEGPLDLSLPKPSREEAEKVVAKASVYPSPSSCSTNEDEPLNLTCTKK
EASPLSAMGTSPIALYTSQPSAKPLDIVTTMQCLRALATNNKQTILIPQLAYTYTTTASS
PAGTEMHETIHLNGVKEEKQDTGSEGVSTVEEQNDSDSGPPRKKMKKTDSGMYACDLCDK
IFQKSSSLLRHKYEHTGKRPHECGICSKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSH
SGSYSQHMNHRYSYCKKETQNQGGGRESPEEDGEAQAETEALSKAERQHLAPSRLNLDER
GSSAREDEESEEEEEEEEEEEGVLDMDDIQVVQIGDEGGDEEEEEEQGVRNEEEMERVMV
EGGGEEEKTEIEIKREEEETDTRQDEVLRSIQEEGEVKMEEEGAMDTEGGVTQEGKAEGE
VIGESGCETNRNTASEDETQTP
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgaggaggaacaacgtg
actaactacaataatgtattggaggccggctcagactcagatgacgaggacaagctgcac
attgtggaggaggaaggcagcctggcggatggggccgactgcgacagcaccctgccagac
gacgagcaccccagggagcactgctgggaccgagtgaaggaggattgtgtgtctgatggt
gaggatgatgtgagcacagatgtcctggtggaggagatgctccagcaaggagacacagcc
gtcatctacccagaggccccagaggatgagccacaaagacagggcacacctgatgccagc
gtccatgacgagaacggaactcctgattcgttctctcagcttctcacctgcccgtactgc
gctcgtggctacaagcgttacagctccctgaaggagcacatcaagtatcggcacgagaag
accgaagagagcttcagctgccccgagtgcagctacagctttgcataccgtgctcaactg
gagaggcatatgacagttcacaagggcggacgtgatcagagacacatcacacagtcgggt
ggcaatcgtaaattcaagtgcactgaatgtggcaaagcatttaaatacaagcaccatctg
aaggagcacctgcgcatccacagcggagagaaaccatatgagtgctccaactgcaagaag
cggttctcccactcaggttcatacagctcccacatcagcagtaagaagtgcatcagcgtc
atctcagttaacggcagaccacggctggggaacaccaaaacccagacccagggtccatca
ccagtgatgcccacaccaccctcagtcctccgcacccagataagggagaagctggagcac
agcaagcccctgcaggagcagctgccccttaaccagataaaaactgagcctgtggactac
gagtacaagccaactgtgataacgtccccagctgtgactgccatgaatggtggggttttc
aacggaggtgctgcggctcctctgcagggcacagtgcaggctgtagtcctgcccactgtt
gggctggtgtcacccatcagcatcaacctggcagacctgcaaaatgctctcaaagtagca
gtggatggtaacgtcattcgtcaggtgctggaaaataatgccaaaggccaggggcaggtg
aactctgggttaaacactggaatgctccaccccccacagcagcaactcatctcagccatc
agtctgcctattgtgggtcaagatggaaatgcaaaaatcattataaactacagtttggac
cagggccagctcacagcccaaaacctgaagaaagagcctgagccagtctcaccagctcag
accaccactgacaacttcaagtcccagaaactcccagaagatcttaccatcagaggcacc
aggtccaatgagactaaagaaaaagaggaaaagaccactaaaacatgtctcctgtgtgat
aactgtcccggtgggctggaatcactccatgccctcaagcactgcaagaaggatggtctc
aggctgaacggaacaggcctggataagtctgagtctgctgttgctgccctactgtcagag
ggaggactctgcaaccagcccaagaaccttttgtccctgctcaaggcctactttgcctta
aatgcagagcccaccaaggaagagctggcaaagatctccgactcagtgagcctgccaata
cacgtggttaagaagtggtttgacaaaatgcaggagggtcagatatcactgggtgcccca
acacctccctcagaggaagaggacacctgtgaagttaacagtgtggtgtctctggtccca
gggaaggacacatccactgtgatcccttctacgacccaggacagccctacagaagccacc
ccagcagagatcaatggtgctcacagctcgccgacctccccctcaccattaaacctgaca
gctggcggtccggtaccagcccagcccccccagagcaccgagggacccctagacctgtcg
ctgccaaagccctccagagaggaagcagagaaagttgtggctaaagccagtgtttacccc
tccccatcctcttgctctaccaatgaggatgaacccctaaacttaacttgcacaaagaaa
gaggcatcgccactctcagccatgggcaccagccccatcgcactgtacaccagccagcca
agtgccaaacccctcgacattgtgaccacaatgcaatgcctaagggctctagccaccaac
aacaaacagactatcctgattccccagctggcttacacctataccactacagcaagcagc
cctgcggggaccgagatgcacgaaaccatccacctcaacggagtgaaggaggagaaacag
gacacaggctcagagggcgtgtctactgtggaggagcagaatgactcagactcaggccct
ccgaggaagaagatgaagaagacggacagcggcatgtacgcctgcgacctgtgcgacaag
atcttccagaagagcagctcgctgctgagacacaaatacgaacacactgggaagcgacct
cacgagtgtggcatctgcagcaaggccttcaaacacaaacaccacttaattgaacacatg
cggctccactcgggggagaagccataccagtgtgacaagtgcggcaagcgtttctcccac
tctggttcctactcccagcacatgaaccaccgctactcctactgcaagaaggagacacag
aaccaaggaggaggccgggaaagcccagaggaggatggcgaggcccaggctgagacagag
gctctgagcaaggcggaaaggcagcacctggccccctcccggctgaatttggatgagcga
ggaagcagcgcaagagaggacgaggagagcgaggaagaggaggaggaggaggaggaggag
gaaggtgtgttggacatggacgacatccaggtggtgcagataggggacgaaggaggggat
gaagaggaagaggaagagcaaggggtaaggaatgaggaggagatggagagagtaatggtg
gaagggggaggagaagaggagaaaacagagatagaaataaaacgggaggaagaggagact
gacacaaggcaggacgaggtgctcaggagcattcaggaagagggggaagtcaagatggag
gaagagggggcgatggatacagagggaggggtgacgcaagaggggaaagcagagggggag
gtcataggggagagtggatgcgaaacaaacaggaacacggcttccgaggacgagacccag
acgccgtag
DBGET
integrated database retrieval system
