KEGG   Xiphias gladius (swordfish): 120789889
Entry
120789889         CDS       T07311                                 
Symbol
tubb6
Name
(RefSeq) tubulin beta chain isoform X1
  KO
K07375  tubulin beta
Organism
xgl  Xiphias gladius (swordfish)
Pathway
xgl04145  Phagosome
xgl04540  Gap junction
xgl04814  Motor proteins
xgl05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120789889 (tubb6)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    120789889 (tubb6)
  09142 Cell motility
   04814 Motor proteins
    120789889 (tubb6)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    120789889 (tubb6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xgl03036]
    120789889 (tubb6)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xgl04812]
    120789889 (tubb6)
   04147 Exosome [BR:xgl04147]
    120789889 (tubb6)
Chromosome and associated proteins [BR:xgl03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     120789889 (tubb6)
Cytoskeleton proteins [BR:xgl04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    120789889 (tubb6)
Exosome [BR:xgl04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   120789889 (tubb6)
  Exosomal proteins of colorectal cancer cells
   120789889 (tubb6)
  Exosomal proteins of bladder cancer cells
   120789889 (tubb6)
SSDB
Motif
Pfam: Tubulin Tubulin_C CIDE-N Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 120789889
NCBI-ProteinID: XP_039983009
LinkDB
Position
LG5:complement(22433162..22448619)
AA seq 570 aa
MAPLSIQSGVKYARALVPETLVRSVSTVQTTICRRVLPSAQPRCFTVCTRSRRRRRGLVA
SSLDELLEQAAGVFVLSCHFLTLVLEEDGTVVDSEEFLRSLPVNTPLMVLEKGETWTQDK
FWEVISDEHGIDPAGNYVGDSALQLDRVNVYYNEASSHKYVPRAVLVDLEPGTMDSVRSG
AFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDSVLDVVRKECEHCDCLQGFQLTHSL
GGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDET
YCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVP
FPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDARNMMAACDPRHGRYLTVATVFRG
PMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKVAVCDIAPRGLKMAATFIGNSTAIQELFK
RISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVSEYQQYQEATANDGEENFED
EEDEINESWDAEQKFDEPIREQEDNLSPIS
NT seq 1713 nt   +upstreamnt  +downstreamnt
atggcgccgctgtccatccagtccggggtgaaatacgccagagctctggtgccggagacc
ctggtgaggtcggtgtccacagtccagaccaccatctgtcggcgcgtcctgccctcggct
cagcctcgctgtttcacggtctgcacccggagccggaggcggcggcggggcttggtggcc
tcctccctggacgagctgctggagcaggctgcgggggtgtttgtgttgtcctgccacttt
ctaactctggtcctggaggaggacgggaccgtggtggactcggaggagttcctccggtct
ctgcccgtcaacacgccgctgatggtgctggagaagggagagacgtggacgcaggacaag
ttctgggaagtgatcagcgatgagcacggcatcgaccccgcaggaaactatgtgggtgac
tcagctcttcagctggacagggtcaacgtctactacaatgaggcttcctcacataaatac
gtccccagggcagtgctggttgacctcgaaccaggaaccatggacagcgttcgctcagga
gccttcggacaactcttcagaccggacaacttcatcttcggtcagacaggtgcggggaac
aactgggccaaaggtcactacacggagggggcggagctcgtggactcagtcctggacgta
gtgaggaaggagtgtgagcactgcgactgtctccagggtttccagctgacccactcgctg
gggggcggcaccggctcaggcatgggcaccctgctgatcagcaagatccgggaggagtac
cccgaccgcatcatgaacaccttcagcgtcatgccctcgcctaaggtgtcggacaccgtc
gtggagccctacaacgccaccctgtcggtccaccagctggtcgaaaacacagacgagacc
tactgcatcgacaacgaggccctgtacgacatctgcttccgcacgcttaaactcacgacg
ccaacctacggcgacctcaaccacctggtgtcggccaccatgagcggcgtgacgacctcg
ctccgtttccccggacagctcaacgcagatctccgcaagctggccgtcaacatggtgcct
ttccccagactccacttcttcatgccagggttcgctcctctgacggcgaggggaagccag
cagtatcgagccctcaccgttcctgagctaacccagcagatgttcgacgccaggaacatg
atggcggcctgcgaccctcgccacggtcgctacctgaccgtcgccaccgtcttccgcggg
cccatgtccatgaaggaggtggacgagcagatgctgaacgtccagaacaagaatagcagc
tacttcgtggagtggatccccaacaacgtcaaggtggccgtctgcgacatcgctccccgg
gggctcaagatggccgccaccttcatcggcaacagcacggccatccaggagctgttcaag
aggatctccgagcagttttcggccatgttccgccgaaaggccttcctgcactggttcacg
ggcgagggcatggacgagatggagttcacggaggcggagagcaacatgaacgacctggtg
tctgagtaccagcagtaccaggaggccaccgccaacgacggcgaggagaactttgaggac
gaggaggacgagatcaacgagagctgggatgcggagcagaagtttgatgagccaatcaga
gagcaggaagacaaccttagcccaatcagctaa

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