Xiphias gladius (swordfish): 120789949
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Entry
120789949 CDS
T07311
Symbol
shha
Name
(RefSeq) sonic hedgehog protein A
KO
K11988
sonic hedgehog
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120789949 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xgl01002
]
120789949 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
xgl00536
]
120789949 (shha)
Peptidases and inhibitors [BR:
xgl01002
]
Cysteine peptidases
Family C46: hedgehog family
120789949 (shha)
Glycosaminoglycan binding proteins [BR:
xgl00536
]
Heparan sulfate / Heparin
Morphogens
120789949 (shha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Intein_splicing
Peptidase_M15_3
DUF7764
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
120789949
NCBI-ProteinID:
XP_039983102
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All DBs
Position
LG5:complement(15275959..15283865)
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AA seq
416 aa
AA seq
DB search
MLLWTRIVLVGLVCLSLVSSGMGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSSAVSLQDGTKKAVKDLQTGDKVLAADEDGNPIYTDFIM
FIDQDSTTRRLFYVIETDSGQKITLTAAHLLFVGHSNYTEKADKRMSAIFASQVQPGQEV
FVFDAERSRFQPVTVKRIYTQEHDGSFAPVTVQGTVVVDRVLASCYAVIEDHDLAHWALA
PVRLAHWVSSLLFSSQPQVSAQNDGVHWYSKILYQLGTWLLDSHSIHPLGMSVYPS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctggaccagaatcgtattggtcggtctcgtctgcttgtccctggtgtcctct
gggatgggatgcggaccgggcaggggctacggcaggagaagacacccgaagaagctgaca
cctcttgcgtacaagcagttcatccccaacgtggcggagaagaccctcggggcaagcggc
agatacgaaggcaagatcacaagaaactccgagcgatttaaagaactgactcccaattat
aacacagacatcatattcaaggatgaggagaacaccggtgccgacaggctaatgactcag
agatgcaaagacaagctgaactcgctggccatttcagtgatgaaccagtggcccggggta
aagctgcgggtcactgagggctgggacgaggacgggcaccactttgaggagtcccttcac
tacgagggcagggccgtggacatcaccacctcagacagagacaagagcaaatacggcact
ctgtccaggctggcggtggaagccggattcgactgggtctattatgaatccaaagcccac
attcactgctctgtgaaagcagaaaactcagtggcagcaaaatcaggtggctgcttccca
ggttcctccgctgtcagcctccaggatggtaccaagaaggcggtcaaagacctccaaacc
ggcgacaaggtgctggcagcagacgaggatggaaacccgatttacaccgacttcattatg
ttcatagaccaggactcgacgacccggaggctcttctacgtgatcgaaaccgactcgggc
cagaaaatcaccctcaccgccgcgcacctcctcttcgtcggccacagcaactacacggag
aaggcggacaagcggatgtcggcgatcttcgccagccaggtccagcctggacaagaggtg
ttcgtctttgacgccgagcgaagtcgattccagcctgtgacagtaaaacggatttacacg
caagagcacgatggctcctttgcgccggtgaccgtgcaggggaccgttgtggtggaccgg
gtccttgcgtcttgttacgcagtcatcgaagaccacgacctggcgcactgggccctggca
cctgtcaggctcgcccattgggtgtcctcgttgcttttcagttcccagcctcaagtcagt
gcacagaacgacggagtgcactggtactccaagatcctttatcaattaggaacatggctc
ttggacagccactcgatccatccacttgggatgtcagtatacccgagttga
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