Xiphias gladius (swordfish): 120789961
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Entry
120789961 CDS
T07311
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xgl04040
]
120789961
04091 Lectins [BR:
xgl04091
]
120789961
Ion channels [BR:
xgl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120789961
Lectins [BR:
xgl04091
]
C-Type lectins
Others
120789961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Lectin_C
Ion_trans
SUEL_Lectin
REJ
GPS
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
120789961
NCBI-ProteinID:
XP_039983123
LinkDB
All DBs
Position
LG1:complement(19563950..19583148)
Genome browser
AA seq
2497 aa
AA seq
DB search
MDSTAFPTLPWMVLLLSWTCYAEEDTETLSCPEYQEGFDGSCYEFLGLQRSFLSAQGWCE
RGGGHLAFILNDETQQFLQKHLEPEKDWWLGLAPAAPNLTLESAATEGPLSWLDGSDVSY
SNWVNMPDAQAACGYILSHSGFQWEATANCSQELNFICQFDSGRSIACDGQNATLQCGSG
QVIEIDDSFYGRKTIHYCRSKLTASPTSSQEECSWIDVVDSVTAHCHGLQACQAPVELSS
FGEPCPVLGSYLSIEYHCKHGLHLLMSKLAAIFDNVTITVKWLLHPFQGNLTCTLNAGDG
HTIDPYNPEEMESTVTHIYSRPGVYMVGVECTTSDWHVTAQKVITIQEPVGEFSVIKCYS
RNVSTEGTKCNALYSSPVQIQVMVEAGTNVSYTIQHEGHLVANSSVDRGITPHNITLNSR
VAEKLGHGCHNLTLAASNRVTARTVTIDLELCLLEPVEGLQASVMSEEGKCPDSTDIIIG
VFLERGAPVQLLFNLTGARETLSETRDMLNGSLQAYTFSSPFEGLLKVKVQAMNAFSAFD
VDVDLENILEACQNYSDFSPDEHGNTVCNMSVDDSTDLRIIATPDTLVDYTQSVTLRVTG
TESLPSKGLTFEWKCQGNCKCRNKTNDETHVIKKECLPNPFEFFKYTLTVRRKTWFRKWV
GLASASSCITVAPREFTDVTISCDNCASINVNDHVKLRLSCVTTCPDVVWYIEDPKPLTG
VLEKCYSEAGRRPPIEMQDGSTEYTVHSKHLRVSRDTLQNISVIAYGKKEPGFVTYTLRV
PGPEPTEPASIPGVTTDAPTDPSTPSCSISPTSGTVLDAFDITCKPSSFCSAGCFYCFRT
DTGKHLRCSHANEVKSVFLPLGDKNNNYSLPVVVTVKNGYEKATTTVTTQVRQSGSGTSV
EALQSAVEDTVTQLEQQGLLSGEALGQIFTSVSDMLNTEAGQDQKDARTKLREQMLTKMT
TVLVDSPTNTTHEVQVTAKAVAGLTRRSDELSPAAQEEAGLLLVDLSSSLNTISVNQDGG
DDGEVVQAATPIVEAASNILNVSSNKKVSDFLLTGINNVQSALLNNKNLNGDPAIIDSGQ
ISVYVNRISPETMQLQDINAQKNSSSRFSFPRLPEDIVSPEEPVDVRMMSFEKNPYSWKE
ENITGTVGSVSLTRVNGTIIAVENLPDEIEILLPRLDVGQENSTVLDLANFSTLIIDVPS
PDVTLVLKMEPSEDISFMLFLGYKDYPNDGNYVAKTQIPLENSKEEEKYTWVLSPKDRTG
SVGVHYLVMKPIVEPGIKSVNATVTVMSIAAQCKYWNETESSWSEDGCRVGPLTTPLVTQ
CLCNHLTFFGSSFFVMPNLVDVSRTAELFATFTNNPVVVCFVGAIFSAYLLVVVWARRKD
IQDSAKVKITVLEDNDPLAEYRYMLNISTGHRHGASTSSQVTITLLGTEGESDPHHLTDP
EKPLFERGGVDMFLLTTHFSLGDLQSIRLWHDNSGEHPAWYVNKVMVQDLESGQKWHFLC
NSWLAVDVGECTLDKVFPIATEMELKRFSNLFFMKTAKDFRDGHIWFSVVSRPPCSTFTR
VQRVSCCFSLLLCTMLTSIMFWGIPTDPSEQTMDLGHIEFTWQQVMIGVQSSIIMFPINL
LIVSIFRNTRPREKASRTDAAKQGKTGRISPSQTSSPQKELKDITPDTVIKDIKRIAQSL
SKAMKSPLPHQELHAGQHTDINSLLSLVEDIIRQQNRGVGSFYTDASKRDHSMILSLGAV
SLQENSVWGNPEKTSDEVQRKSNNSRYLYRQLRHVEKELGLLGPSRFPDPDSYNRAMQQV
QGMKGLLEYHLPSPSLDGDQLERSPSPEGSFDNGDSTKKCCQGGLPWWFVFVGWILVIAT
SGVSGYFTMMYGLTYGKDRSISWLISMVVSFFESLFITQPLKVLGFAAFFALVLKKVDQE
EYGEPRIDESLRNPDDPDAVRAARRDSTCSFYQPPPPTDIERIRNNMIKEQKVFALMGEI
LAYMGFMWMLLLVAYGQRDPNAYFLTQHIRQSFSKGISESMSIQGVFNWANTTLLSNLFG
ERPGFITDGNSKLVGNARLRQVRVRKNSCHVARSMQQSVPDCHALYSWELEDMGSYGPGW
SRPVGSNTSLNLPSPWTYQSQGKLRAYPIWGSVLLYRGGGFVVDLGPDLPNSSRSLQYLY
DSTWFDVYTQAIFVEFTVYNANVNLFCIVTLMLETTAIGAFQFRSELQSVRLYQSTGGLH
IFVMASEAIYFLFIIYYMFVQGKLMRQQKWAYLKSKWNLLEMAIIILSWSALSVFIKRTL
LGKRDMDYYQSNKDQYASFHETAKADAVLGYLIAFLVLLATVKLWHLLRLNPKLHMITST
LQRAWTDISGFLVVLTIMFLAYSIASNLMYGWKLYSYRTLLDAAQTIVSLQLGIFNYEEV
LNYNPVFGAFLIGSCIVFMTFVVLNLFISVILVAFSQEQIHHKPSEEDEIVDLMLMKLCS
LFGLKCKKQGGDSLTEKPFASSASTTSTISSGNIQEG
NT seq
7494 nt
NT seq
+upstream
nt +downstream
nt
atggacagcactgctttccccacactgccctggatggttctcctcctcagctggacttgt
tatgctgaggaggataccgagactctgtcctgcccagaatatcaggagggtttcgacggc
tcctgctacgagtttttgggtctgcagcggtccttccttagtgcccagggatggtgtgag
cgaggcggaggacacctagccttcatcctgaatgatgaaactcagcagttccttcagaag
cacctggagcccgagaaggactggtggctcggactggctcctgctgctccaaacctcacg
ctcgagtctgctgccactgagggacccctttcatggctggatggctcagatgtcagctat
agtaactgggtgaacatgcccgatgcacaagcagcctgtggatatatcctgagtcattca
ggcttccagtgggaggccacagcgaactgtagccaggaactcaacttcatctgccagttt
gattctgggagatctattgcatgtgatggccaaaatgccacattgcaatgtggttctggt
caagttatagagattgacgacagcttctacggtcgaaagacaattcactactgcagatcc
aaacttacagcctcccccacatcctcccaggaggagtgcagttggatagatgtggtagat
tctgtaacagcccattgtcatggactgcaggcctgccaggctccagtggaactgagttct
tttggtgaaccctgtcctgtgctgggaagttacctgtctatagagtaccactgcaaacat
ggactccacttattgatgagtaaactggcggccatttttgataatgtcaccatcactgtg
aagtggctccttcatccatttcagggaaacttaacgtgcacactgaatgctggggatggc
cacactattgatccatacaacccagaagagatggagagcactgtgacacacatatacagc
cgtcctggtgtttacatggttggggtggagtgcactaccagtgactggcatgtgacagca
cagaaagttataaccattcaggagcctgtcggagagtttagtgtgatcaagtgctatagc
cgaaatgtgtcaacagagggcactaaatgcaatgcactttatagcagtcctgttcaaatt
caagtgatggtggaggccggtacaaatgtttcctacacaattcaacatgaaggccatttg
gttgcgaactcgtcagtggacagagggattacaccccacaacattacactgaattcaaga
gtggcagagaagcttggacacggctgccacaacctgactctagctgcgtcaaaccgggtc
acagcccgcactgtgaccattgatctggagctctgtctgctggagcctgttgaaggcctg
caggcctcggttatgtcagaggaaggcaagtgtccagactccactgatattatcattggt
gtttttttggagcgaggagcccccgtgcagcttctcttcaacctcactggagccagggag
actttgtctgagaccagagacatgctcaacggtagcttacaagcttacacattctccagt
ccatttgaaggattgttaaaagttaaagtacaagccatgaatgccttttcggcctttgat
gtggacgtggacttggagaacatactcgaggcttgccagaattactctgacttttcacca
gatgaacatggaaacacagtatgtaatatgagtgtcgacgactctactgacttgagaata
attgctactcctgacactctggtcgactacactcagagtgtcactttgagagtaactgga
acagaatcattacccagcaaaggactcacgtttgaatggaaatgtcaaggaaactgcaaa
tgcagaaacaaaacaaatgatgaaactcatgttatcaaaaaagaatgcctcccaaacccc
tttgaatttttcaaatacacgttaactgtaaggagaaaaacctggtttaggaaatgggtt
ggccttgcctcagcttcaagttgcatcactgttgctccaagagaattcacagatgtcact
atcagttgtgataattgcgcttcgataaatgtgaatgaccacgtaaagctaagactgagc
tgtgtgaccacttgtccagacgtagtctggtatattgaggaccccaaacctttgacgggt
gtccttgaaaaatgttactctgaagcaggaaggaggccacctattgagatgcaggatggc
agcactgaatatactgtacacagcaaacatctgagagtttcgagggacacactgcagaac
atcagtgtgattgcttatggcaagaaggagccaggttttgtgacgtacactcttcgagta
ccagggcctgagccaactgaaccagcttcaataccaggagtgacaactgatgcgcctaca
gaccccagcaccccctcatgtagcatctctcccacatcaggaactgttcttgatgctttt
gacatcacctgcaaaccaagctctttctgctctgcaggctgtttttattgcttcagaacc
gacacaggcaaacatctgcgctgcagtcatgcaaatgaggtgaaatctgtcttcctgcct
ctcggagataagaacaacaattacagtttgcctgttgtggtgactgtgaaaaatggatat
gaaaaagccaccacaactgtcactactcaggtacggcaaagtggctcaggtacctcagtg
gaagctctccagtctgcggtggaggataccgtgactcagttagagcagcaaggtctgctg
tctggtgaggcacttggacaaatatttacttcggtttctgacatgctgaatacagaggct
ggccaagatcagaaggatgcgaggacgaagctcagagagcaaatgctgaccaaaatgacc
acagtgctggtggactcccccactaacacaactcatgaagtgcaagtgacggccaaagct
gtggctggactcacccggcgctcagatgagctcagtcccgctgcacaagaggaagcaggt
ttgttgttagtagacctcagctcctctctcaacactatcagtgttaatcaggacggcggg
gatgatggagaagttgtgcaagcagctacaccaatagttgaagcagccagtaatattttg
aatgtttcatcaaataaaaaagtctcagattttcttctgactgggataaacaatgttcaa
agtgctttgctgaataataaaaatctgaatggagaccctgccatcattgattctggtcag
atcagtgtgtatgtcaacagaatctctccagaaaccatgcagctgcaagatattaatgcc
cagaagaacagctcgtccagattttccttccctagactgcctgaagatatcgtttctcca
gaagagccagtggatgtgagaatgatgagctttgagaaaaatccatattcgtggaaggag
gaaaacatcactggaactgtaggatctgtgtctctcaccagagtgaacggcaccatcata
gccgttgagaacttaccagacgagatagagattctcctaccaaggcttgacgttgggcag
gagaacagcacagtccttgacctcgccaatttcagcacattaataattgacgtgccgtct
ccagatgtaacactagtgctgaaaatggagccgtctgaagacatttccttcatgctattc
ctgggatataaagattatccaaatgatggaaattacgtagccaagactcagatccctcta
gagaattccaaagaagaggaaaaatatacctgggtgctgagtcctaaagacagaacagga
tctgttggggtgcattaccttgtgatgaagcccattgtagagccaggcatcaaatccgtc
aacgccactgtcactgtcatgtccattgctgcccagtgcaaatactggaatgaaactgaa
tcttcttggagtgaagatggctgcagggtcggcccgctcaccacgcctctggtcactcag
tgcctctgtaaccacttgactttttttggcagctctttctttgtcatgccaaacttggtg
gatgtgtcacgcaccgcagaactttttgctacattcactaacaatcctgtggtggtgtgt
tttgtgggggccatcttttctgcttatctcctggtggttgtatgggcacgcaggaaagac
atccaggactcagccaaggtcaagataacagtgcttgaggacaatgatcccttggccgag
tatcgttatatgctgaatatcagcactgggcatcggcatggtgcatccacctcctctcag
gtgacgataactctgctgggcacagagggagaaagtgacccccaccacctgactgaccct
gagaaacctctgtttgagaggggtggggtggacatgttcctgctgaccacacacttttct
cttggagatctacagagcatcagactgtggcacgacaattcgggagaacaccctgcatgg
tatgtcaacaaagtgatggtgcaggatctggagagtggtcagaaatggcatttcctgtgt
aactcctggcttgccgtagatgtgggagagtgcactcttgacaaggtcttcccgatagcc
acagaaatggaattgaagaggtttagtaacctgttcttcatgaagacagccaaggatttc
cgtgacggccatatctggttctctgtagttagtcgccctccctgcagcactttcacacgt
gtgcagcgtgtgtcctgctgtttttcgcttctgctgtgcactatgctgaccagcattatg
ttttggggcatcccaacagacccctctgaacagacgatggacctgggacacatcgagttc
acctggcaacaggttatgattggagttcaaagttcaatcatcatgtttcccatcaatctc
cttattgtgagtatcttcagaaacactcgtcctcgagagaaagccagcagaacagacgcg
gctaaacaggggaagactggtcgcatttctccctcacagacttcctccccgcagaaagaa
ctgaaggacatcacaccagacactgtgatcaaggacatcaagagaattgcgcagtctctc
tcgaaggccatgaaaagtccattgccccatcaggagcttcatgctggtcagcacacagac
atcaacagtctgctgtctctggtggaggacatcataagacagcagaatcgaggggttgga
agcttttacactgatgcctccaaaagggatcactctatgatcctcagtttaggtgcagtc
agtctacaagaaaacagtgtgtgggggaaccctgagaagacttcagatgaagttcagagg
aagagcaacaacagccgatacctgtacaggcagctgcgccatgttgagaaggagcttggt
ctgttgggaccttctcgtttcccagacccagacagctacaaccgagccatgcagcaagtt
caaggtatgaagggtcttctagagtaccacctcccctcgcccagcctggatggagaccag
ctcgagcgcagccccagtccagaagggagcttcgacaatggtgactccaccaagaagtgc
tgtcaaggagggctgccatggtggtttgtctttgttggatggatactggtgattgcaacc
agtggtgtgtcaggatacttcaccatgatgtacgggctgacgtacgggaaagaccgctct
ataagctggctcatctccatggtggtctccttctttgagagtctcttcattacccaacct
ctgaaggttcttggttttgccgctttctttgctctcgttctgaagaaagttgaccaggag
gagtacggagaacctcggatagatgagagtctcagaaacccagatgatcctgatgcagtg
cgggcagcgagaagagacagcacatgcagtttctatcagccaccacctcccactgacatc
gagaggattaggaacaacatgattaaagagcagaaagtctttgcactgatgggggagatt
cttgcctacatgggatttatgtggatgttgctcctggtggcgtacggtcagagggacccc
aacgcctactttctgacccagcacattcgacagagcttcagcaaaggaatctcagaaagt
atgagcattcagggtgtgttcaactgggcaaacacaactctgctgagcaacctgtttgga
gagcgaccaggatttatcacagacggaaactcaaagctggtgggtaacgctcgtcttcgc
caggtgagggtgaggaagaactcctgccatgtcgctcgctcaatgcagcagtctgtgccg
gactgtcacgctctgtactcgtgggagttggaggacatgggctcctacggtccaggctgg
agccgccctgtgggaagtaacacctcgctgaaccttcccagcccgtggacgtaccagtcc
cagggtaaactgagggcctaccccatctggggcagtgtgttactctacagaggaggaggg
tttgttgtggacctggggccggatttaccaaattccagcagatcccttcagtacctttat
gacagcacctggtttgatgtgtacacccaagccatttttgttgagttcaccgtgtacaat
gccaacgtcaacctcttctgcattgtcacactcatgctggagaccacagccataggagct
ttccagttccgcagtgagcttcagagtgtgcgtctttaccagtcgaccggcggccttcac
atctttgtcatggcctctgaagccatctacttcctctttatcatttattacatgtttgtt
cagggaaaactgatgaggcagcagaagtgggcttatctcaagagtaagtggaacctgctc
gagatggcgatcatcattctcagctggagtgcgctgtctgtcttcatcaagaggactcta
ctggggaagcgggacatggactattaccagagcaacaaggaccaatacgccagtttccat
gagacggccaaggctgatgcagtgctggggtatctgattgccttcttagttctgttggcc
acagtcaaactgtggcacctgctgagactgaaccccaagctgcacatgatcacatccaca
ctgcagcgagcctggactgatatttcaggcttcctggtggtcttgaccatcatgttcctg
gcctactccattgcttcgaacctgatgtatggttggaagttatactcctatcggaccctg
ctggatgctgcacagaccatagtcagcctgcagcttggcatttttaactacgaagaggtt
ctgaattataatccagtgtttggtgctttcctcatcggctcctgcattgtgttcatgacc
tttgtggttctgaacctcttcatctctgtcatcctggtggcattcagtcaagagcagata
catcacaagccatcggaagaagatgagatcgtggacctgatgctgatgaaactctgtagt
ttgttcggactcaaatgtaagaaacaagggggcgacagcctgactgagaagccatttgct
tcatctgcttcaacaacatctacaatttcttctgggaatattcaggagggctga
DBGET
integrated database retrieval system
