Xiphias gladius (swordfish): 120790020
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Entry
120790020 CDS
T07311
Symbol
lama1
Name
(RefSeq) laminin subunit alpha-1 isoform X1
KO
K05637
laminin, alpha 1/2
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04510
Focal adhesion
xgl04512
ECM-receptor interaction
xgl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120790020 (lama1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120790020 (lama1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120790020 (lama1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_II
Laminin_G_3
Laminin_I
CREPT
Motif
Other DBs
NCBI-GeneID:
120790020
NCBI-ProteinID:
XP_039983192
LinkDB
All DBs
Position
LG5:complement(23582145..23618429)
Genome browser
AA seq
3073 aa
AA seq
DB search
MKLLLLLLLIEQTAAQQRGLFPAILNLASNAVISSNATCGDPEPEVYCKLVEHVPGRRIK
NPHCPKCDANSVLSKERHPITNAIDGTNQWWQSPSIKNGRQFHWTTITLDLKQIFQVAYI
IIKAANSPRPGNWILERSLDGVTFDPWQFYAISDSECLTRYNITPRLGPPTYKSDTEVIC
TSYYSRLNPLEHGEIHTSLINGRPGADDLTSDLLNFTSARYIRLRLQRIRTLNADLMTLS
VRDPRDIDPIVTRRYYYSIKDISVGGMCICYGHAQSCPLDPVTKKLQCVCEHNTCGESCN
ECCPGYHQQPWQPGTVSEGNTCEKCNCHNKAVNCFYNQTISELFLSLNSHGVRQGGGVCI
DCQQNTAGINCETCRDGYYRPAGVSPYSDSPCFECNCDLRGSKSSVCTRDNTQPGVSAGQ
CVCQEGFAGQQCDRCAFGYRDFPQCVRCECNLWGSINTDPCRSCTCKVNVMGAHCDLCKP
GFYNLQEKNPLGCTDCFCFGVSNVCESSTWSTAQVFHTDAWLHPFLSHHTLPVVHGNDLP
IPSNTSSGQTQQVLSWAAPTSFLSNKLVSYGGYLNYSVVYDVPLDNEDHSLPTHSDIIIE
GNGQALRLSPHLLLFLSPLAERSVAVAMVPQQFVDEQTGVQVTRDDLLSVLADITSLRVR
VHLNTSADGPIRLSSVSLDVADSGSVSGVQAVAVETCECPWGYSGTSCEACLPGFYRVGG
VLFGGNCMKCECNDHATECDINGVCLGCTHNTTGPQCDQCLPGFYGDSTEGTTDDCRLCP
CPLTEPSNSFSPTCVLEAPGQVSCDQCQDGYTGRNCERCASGYYGNPQVVGGVCVRCECN
DNVDISEPGHCDTITGECLRCLGNTAGRHCEVCQPGYYGDAVHAKDCLECGCDVSGALSG
VCHVTTGQCLCRENVTGRTCDRCLSGFFGLQSRQGCQACSCSQSGSVSESCDEEGRCQCV
EGVSGDKCDHCSRGYYGFNGKGCTACTCDHTWGNCNPKNGDCICPAHTEGETCDRCETGY
WGHNPATGCKACSCSIAGSSAPQCDLINGQCRCREGFSGRSCDQCAPGYHGYPACSACGC
DTAGTEEKFCNTTLGVCDCRHTGECVCKVGVSGQRCEECVSGWFGLSAVNPDGCSQCFCS
GLSHDCEEQGGLTRVTITLAHSPALLLLVSQSNLQGVVSGIYQQGGDMLLDTRQLNTSRL
VGPLYWRLPPQFEGNQLLSYGGLLSYIITFYAEDGSGLSNQEPQVLMRGGTLRKIVIYTD
MVAPNNSVKTQHDIRMTEHKWKYFNSVSEKAVSHADFMSILSNIQYVIIKASYGTRLQQS
RISNITMETAVEAELEEGSEVARLIESCICPRGYTGLSCQECAAGYFRQPQSELSSQSQK
SMFVHPCVQCRCNNHSESCDTETGDCQNCQHHTSGRSCELCAPGYYGNVSGSISDCSLCA
CPLRDNSFSPTCVPEGAFGDFHCTACQTGYEGRYCERCSVGYYGNPSLPSGRCSRCNCSG
WGSLHPLCDALTGQCDCKAGVKGRSCDQCDEKHVLQGGECVSCDDECTGILLDDLDKLHN
HFLSVNLSGVSMAPYRQLVVLENQTRDIQVVFSQNSSFAFHLSRVEDELNHITSDLSALL
QQVTRLSNDLEEVGLSTNNSLSQGNLLLGSISSLQDNIQVLQREVGHLNRTTEEELESAN
QTHLLVGLELMLETMRAVNLTAANTAANQEFSLSEFLVHSLQKDFLPSRVVVDNRFHPIS
TSLTVGIETLQKAHTHLNDAAQRNTKTQTLLDSTHTLLHEYQSVHQNLSVECLSVDGLME
EGQLLLDDTISLTEELTNTTAQVEVLGGQMDQWRPLLRKQVDGLVVGLKMTDALENVYRA
ESHAHLLQSHAHSVHSSLSSVCNVSQNGSRLVHLDSDITEQVDSAQQVALIAHVSASVAL
NMTIQSEQPLSGESRAKLNISSVVLQESRRINETAEDLQLDVSMVTSRLGSVRESVRNSS
LLLRQPIRELQSLSNGSSVSLQQAHLQAAVAHSSLQEALQQLQRLRTQLQDSSSVVEKTS
NTVRETNQLVTQTHTAANEAQRKLEEAEHRTDRLMERIKPLSLLGETLSRNLSDIRELID
QARRQAASIKVAVQADRDCVRYYRSQIESSNFNTLTLILKTSSPDNLLFYLGSNTTVDYL
AVDMHNGKVSLVWDVGSGSTRLEFPGLDITNNRWTRINATRFGAHASLLVHQLESESAPL
PAVTASSPGSSRVLDIDRNTMIHIGGLGAQTQSPAALRSSTFQGCLGEASLNERNIGLWN
YDSREGECGGCFSSPQAEETSFHFDGSGFSLVQKSLRATSTSIVLLFKTLSPSGLLLYLA
SNNTRDFLSMELVEGRVRLTFDLGSGALILTSNRKYNTGVWYKITLQRNKRKGYLSIMAA
DQSSEKEVLEAESPGMASDLNRSDLDPIYIGGLPAYRPIRRQVVSRSYVGCIKNVEIARS
NFDLLRDAYGVRKGCILEAVRSVSVLAGGFVQITPPSFRQEAELLFSFSSNNQSGVLLAA
FSDDHSHRQQFLSVHLVSGALEAEFGEVAGATRRVIVTKPDGGSFSDGEKHSVIITINRK
SLFLLVDEDHLKSVSMLPGGFSRFSPASFFIGGLPSGEESRLPVRLQTLSRWFRGCIQHL
VVGGALIDLSGALRYEGAELDSCLLKERAGGAVLPDDQDVEPTPDPAYMPVAPPTHLSAL
TPGTLTCVSEVEPSFLPSAAQFGSSKHSHMTFIINPNTVRKSVSVRLSVRSRALDGLILL
LSDSKHMDFIVLRLTGGRMMVSADLGKGPASITSSVAINDGDWHAVTAEVSRRLVSVSVD
GSSPDSVTVKGNQLDVDNRLYLGGLPHTHTTRRINVSTSFQGCVRSVSLNGATLDLTKPA
LQHDVTSCFTKDQTGSYFNGSGYAILMHDGYKVGSDVSVTLEFRTSQSEGVFLGISSAKV
DAIGLELINGQVVFNVNNGAGRVSVRSIGQVLCDGQWHRLLARKTKHSLSLSVDGRSYTT
PNPYPQSTSAETNNPVYLGGYPVGVKQNCLSISSRFRGCLRNLQLVKSHLSNTLNLSSAH
FLLGVTPNSCPVA
NT seq
9222 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgctgcttttgttgctgctgattgagcaaactgcagctcagcagagaggtctg
tttccggccatcttgaacctggccagtaacgcagtgataagcagcaatgcgacatgtgga
gatccagaacctgaagtttactgtaaactggttgaacatgttccaggacgaagaatcaag
aatccacactgtcccaaatgtgatgccaactcagtcttgtccaaagaacgtcatccgatc
acaaacgccatcgatgggacaaatcagtggtggcagagtccaagtatcaagaatggacga
cagtttcactggaccaccatcacactggacctcaaacagatttttcaggttgcctacatc
atcatcaaggcagctaactctcctcgcccaggtaactggatcctggagcgctctctggat
ggtgtgacctttgacccctggcaattttacgccatcagtgactctgagtgtttgactcgt
tacaacatcacaccaagactcggaccgccgacctacaagagtgacactgaggtcatctgt
acgtcttactactccagactgaacccactggagcatggagagatccacacctctctgatt
aacgggcgacctggtgccgacgatttgacctctgacctcctgaacttcacctcggctcgt
tacatcagattgagacttcagcgcatcagaactctgaatgccgacctgatgacactgagt
gtccgtgaccctcgagacattgaccccattgtcacccggaggtattattactccatcaaa
gacatctctgttggcgggatgtgtatctgttacggacacgctcagagctgcccactggac
cctgttaccaagaagctgcagtgtgtgtgtgaacacaacacctgtggagagagctgtaat
gagtgttgccctggttaccaccagcagccatggcaaccaggaactgtctcagagggaaac
acatgtgaaaagtgtaactgtcacaacaaagcagtcaactgtttctacaatcaaaccatc
tctgaactatttttgagtttaaactctcacggcgttcgtcagggaggtggcgtttgtatc
gactgtcaacaaaacacagccggcatcaactgtgagacctgcagagatggatactacaga
cctgctggagtttctccatattcggactccccttgttttgagtgtaactgtgatctgaga
ggatcaaagtcttcagtctgcaccagagacaacacccagccaggtgtgtctgcaggtcag
tgtgtgtgtcaggaaggttttgcaggtcaacagtgtgatcgttgtgcattcggatacaga
gattttcctcagtgtgttcgctgtgagtgtaacctgtggggcagcatcaacaccgacccc
tgcaggtcctgcacctgcaaggtgaacgtgatgggagctcactgtgatctgtgtaaacca
ggtttctacaacctgcaagagaaaaatccgctcggctgcaccgactgtttttgcttcggt
gtatccaacgtctgtgagagctccacctggtctacagctcaggtgtttcatacagatgct
tggctccacccctttctgtcccaccacaccctccctgtagtccatggcaacgacctcccc
attcccagcaacacctcctctggtcaaacccaacaagtgctgtcgtgggcagcaccgacc
agtttcctcagcaacaagctggtgtcttatggaggttacctaaactactcagtggtatat
gatgtcccattggacaatgaagaccactctctccccacccactctgacatcatcattgag
ggtaatggccaggctcttcgtctctcaccacatctcctcctcttcctctctccgctggcc
gagcgctcagttgccgtggcaatggtcccgcagcaattcgtggatgaacagacaggtgtt
caagtaacccgtgacgacctgctgtcggtcctcgctgatataacatcactgagggtcaga
gttcacctgaacacctccgctgacgggccaatacgtctcagttcagtatctctggatgtt
gctgactctggatcagtttctggggtgcaggcggttgcggtggagacgtgtgaatgtccg
tggggttacagtggcacttcttgtgaggcatgtctcccaggtttctacagagtgggagga
gtattgtttggaggaaactgtatgaagtgtgagtgtaatgatcatgctactgagtgtgac
atcaacggagtttgtttgggttgtacccacaacacaacaggtcctcaatgtgatcagtgt
ctccctggtttctatggcgactccactgaggggacaacagacgactgtcggttgtgtccg
tgtcccctgacagagccgtccaacagtttcagtcccacctgcgtgttggaggcacctggt
caggtgtcatgtgatcagtgtcaggacggatacacagggaggaactgtgagaggtgtgcc
agtggttactatggtaacccacaggtggtgggcggggtctgtgttcgctgtgagtgtaac
gataacgtggacatcagtgaacctggacactgtgacaccatcactggggagtgtttgcgt
tgcctcggcaacacggctgggagacactgtgaggtctgtcagcctggttactatggagac
gccgttcacgccaaggactgtctggagtgcggctgtgatgtcagtggtgccctctccggt
gtgtgtcatgtcacgacgggtcagtgtttgtgtagagaaaacgttacaggacgcacctgt
gaccgctgcctgtcggggttcttcgggctgcagagtaggcagggctgccaggcctgcagc
tgcagccaatctggatctgtttctgagtcatgtgatgaggagggccggtgccagtgtgtg
gagggtgtgagcggagacaagtgtgaccactgtagtcgtggttactatggtttcaatggc
aaaggctgcacagcatgcacctgcgatcacacctgggggaactgcaaccccaagaatgga
gattgcatctgccccgcccacacagagggagaaacctgcgacaggtgtgagacaggttac
tggggtcacaacccagccacaggctgcaaggcgtgcagctgcagcatagcaggaagctcc
gcccctcagtgcgatctcatcaatgggcagtgtcggtgcagggaggggttctctggcagg
tcatgtgaccagtgtgcacctggttaccatggttacccagcatgctcagcatgtggttgt
gacacggcgggaacagaagagaagttctgcaacacaacgctgggagtgtgtgattgtcga
cacaccggagagtgtgtgtgcaaggtgggtgtgtcgggtcaacgttgtgaggagtgtgtc
tctggttggttcggtttgtcagctgtgaatccagacggctgctctcagtgtttctgttca
ggactgagccacgactgtgaggagcagggaggactcaccagagtaacaatcaccctggct
cactctcccgctctcttgttattggtcagtcagtcaaacctacagggtgtagtatccgga
atttaccagcagggtggagacatgctgctcgacacccgtcagctcaacaccagcaggctg
gttggcccactctactggagactgccaccccagtttgagggcaaccagctgctgtcatat
ggcggcctgctgtcttacatcatcaccttctatgctgaggacggttcgggactgtccaat
caggagcctcaggttctgatgaggggtgggactctaaggaagatcgttatatacactgac
atggtagcccctaacaacagcgtcaagactcagcatgacatcagaatgacggagcacaaa
tggaagtattttaactcagtgtcggagaaggcagtgagtcacgctgacttcatgtccatc
cttagtaacatccaatacgtcatcatcaaggcttcatacggaaccagactgcagcagagc
aggatctctaacattaccatggagacagcggtggaggcggagttagaggaagggtcagag
gtagccagactgatcgagtcctgcatctgtccacgtggatacactggactgtcctgtcag
gagtgtgcagcaggttatttccgtcagcctcagtctgaattatcgtctcagagtcagaag
tcaatgtttgttcatccatgtgttcaatgtcgctgcaacaaccacagcgagagctgtgac
acggagactggagactgtcagaactgtcagcatcacaccagtggacggagctgtgagttg
tgtgccccggggtattatgggaacgtcagtggctccattagtgactgttcgctgtgtgcc
tgccccctacgggacaacagtttcagtcccacctgtgtgccggagggagcatttggtgat
tttcactgcactgcctgtcagacaggatacgagggaagatactgtgagaggtgttcggtg
ggttactatggtaatccctcattgcctagcgggaggtgttcacggtgtaactgcagcgga
tggggctctctccacccgctgtgtgacgcattgaccggacaatgtgactgtaaggccggg
gtgaaaggtcggtcatgtgaccagtgtgatgagaaacacgtcctgcagggaggagagtgt
gtgtcgtgtgacgatgagtgcactggcattctgctggacgacctggacaaactacacaac
cacttcctgtctgtcaacctgagtggcgtctccatggcaccataccgccagctggtggta
ctagaaaaccagaccagagacatccaggtggtgttttcacagaacagctctttcgctttc
catctgtccagagtggaagatgagttaaatcacataacctctgacctcagtgctttactg
cagcaggtcacacgcctgtctaatgacctggaggaagtgggcttgtcaaccaacaacagc
ctctcccagggtaacctgctgctggggagtatcagcagtcttcaagacaacattcaggtg
ctgcagagggaggtagggcatctgaaccggaccacagaggaggagcttgaatcagctaat
cagacgcatttgctagtggggttggagctcatgttggaaaccatgagagctgtcaatcta
acagcagccaacactgcagcaaatcaggagttcagcctgtcagagtttctcgtccactca
ctgcagaaggacttcctgcctagcagggtggtggttgacaacaggttccaccccatatcc
acctcgctcactgtcggaatagaaacactgcaaaaagcacacacgcacctaaacgacgct
gcacaacgaaacacaaaaacacagaccctgctggacagcacacacactctgctgcacgaa
taccagtctgtccatcagaacctgagtgttgagtgtctctctgtggatggactgatggag
gagggtcagctgttgctggacgacaccatcagcctgacagaagagttaacaaacaccact
gcacaggttgaggtgttgggtggtcaaatggatcagtggcgccccctgttgaggaaacag
gtggacggtttagttgttggactgaagatgacagacgctctggagaacgtttaccgtgca
gagagccacgcccacctgctgcagagccatgcccactccgtgcacagctctctgtcgtcg
gtgtgtaacgtgtctcagaatggcagccgattggttcatctcgatagtgacatcacagag
caagttgactctgcccagcaggtggccttgattgcccatgtctctgcctccgtcgctctc
aacatgaccatccaatcagagcagccactgtcaggggaaagcagagccaaactgaacatc
agctctgttgttttacaagaaagtcgacgaatcaacgagacagctgaagacttgcagctg
gatgtatccatggtaaccagcagactgggatcggtcagagagagtgtccgtaattcgagc
ctcctcctccgtcagccaatcagagaactgcagagcctctctaacggttcatccgtgtca
ttgcagcaggctcatcttcaggctgcagtagcacactccagcctgcaggaggcgctgcag
cagctgcagagactcagaactcagctgcaggattcttcttctgtggtggaaaagaccagc
aacacagttagggagaccaaccagctggtgactcagacacacactgcagccaatgaggcg
cagcgtaaactggaggaggcggagcatcgtacagaccgtctgatggagcggataaagccg
ctgagcttgctgggagaaacactgagcaggaacctgtctgacattagagagctgatcgac
caggcccgaagacaggctgcatcgataaaggtggcggtgcaggcggacagagactgtgtt
cgatactacagatcacagattgagtccagtaacttcaacactttgactctgatcctgaag
acgtccagtccagataacctgctcttctacctgggcagcaacaccacggtagactacctg
gcagtagacatgcataatgggaaggtgtctctggtgtgggatgtgggctcaggcagcacc
aggctggagtttcctggactagacatcaccaacaacaggtggaccagaatcaacgctaca
cggtttggggcccacgcttctctgttagtccatcagctggagtccgagtctgctccgttg
cccgcggtaacggcatcatcaccaggatcatcccgagttttagacatcgacagaaacaca
atgatccacatcggaggcctgggagctcagactcagagccctgcagcgctgaggtcctcc
acctttcagggctgtctgggtgaagcatcgctcaacgagagaaacatcggactgtggaac
tacgacagcagagagggggagtgtggaggctgcttcagcagtccccaagcggaggagact
tccttccactttgatggatcaggattctcattggtccagaagtctctgcgtgcgacctcc
acctcgatcgtcctgctgtttaaaactctgtcgccgagcggattgctgctctacctggcc
tccaacaacactagagacttcctgtccatggagctggtggaggggcgtgtccgcctgacc
tttgatctaggttcaggtgctctgatcctgacctccaacaggaagtacaacactggggtg
tggtacaagatcaccctgcagaggaacaaacgcaaaggttacctgtccatcatggctgct
gatcaatcatcagagaaggaggtgttggaagcggagtctcctgggatggcctccgacctg
aaccgctctgacctcgaccccatctacatcggaggacttcctgcctacagaccaatcaga
cgacaggtggtgtccaggtcgtatgtcggctgtataaagaacgtggagatcgctcggtcc
aacttcgacctgctgagagacgcatatggagtcaggaagggctgcatactcgaggcggtg
cggagtgtgtcagtgctggccggaggcttcgttcagatcactcctccttcattccgtcag
gaggcagagcttctcttctccttctcctccaacaaccaatcaggagtcctactggctgcc
ttcagtgacgaccactcacacagacagcaattcctgtctgttcacttggtctcaggtgca
ttagaggcagagtttggtgaggtggccggagccactcggagggtgatcgtgacgaaacct
gatggggggtccttcagtgacggagagaaacactctgtgattatcaccatcaacaggaag
tctctgttcctgctggtggacgaagatcacctgaagtctgtttctatgttgccgggtgga
ttttctcgtttttctccagcctccttcttcattggtgggctgccctcaggggaggagtcc
cgtctaccagtcagactacagactttatccaggtggttcagaggctgcatccaacacctg
gtggtcggtggagcacttatcgacctatcgggagctctgaggtatgagggggcggagctt
gacagctgcctattgaaggagagggctgggggggcggtgcttcctgatgaccaggatgta
gaacctactcctgaccccgcctacatgcctgtagccccacccacacatctgagcgccctg
acacctggaacactaacgtgtgtgtcagaggtggagccaagtttcctgccatcagcggct
cagtttggttcatccaaacacagtcacatgaccttcatcatcaaccccaatactgtcagg
aagagtgtctcagtgaggttgtcggttcgaagccgcgctctggatgggttgattctcctc
ctctctgactccaaacatatggacttcatcgtcctgagactgacgggggggagaatgatg
gtgtcagccgacctagggaaaggccctgcctccatcacctcatctgtcgccattaacgac
ggagactggcacgctgttactgccgaggtcagccggcggttggtgtcagtctcggtcgat
ggttcgagtccagattctgtgacagttaaaggaaaccagctggacgtggacaacagactt
tacctgggaggactaccacacacacataccaccagacggatcaatgtgagcaccagcttt
caaggctgtgttcgctctgtcagtctgaatggagctacgttggatctgaccaagccagcc
ttgcagcatgatgtcacttcctgtttcaccaaagaccagacaggaagttactttaacggc
agcggctatgccatcctcatgcatgatgggtataaagttggctcagacgtgtcggtgact
ttggagtttcgaacgagtcaatcagagggggtgtttttaggaatcagcagtgcgaaggtt
gacgccattggactagagttgatcaatggacaggtggtgtttaacgtgaataacggggct
ggtcgagtgtcagtgcgttcaattggtcaggtgttgtgtgatggacagtggcaccgcctg
ctggccagaaaaaccaaacacagcctgagtctgagtgtagatgggcggagttacaccacc
cccaacccctacccacaatccacctctgctgagaccaacaaccctgtctacctgggaggt
tatccagtgggtgttaaacagaactgcctgtcgatcagttccaggttcagaggttgtttg
aggaacctgcagctcgttaagtcgcacctgagcaatactctcaacctgagctccgcccac
ttcctgttgggtgtcacacctaactcgtgtcctgttgcctag
DBGET
integrated database retrieval system
