Xiphias gladius (swordfish): 120790025
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Entry
120790025 CDS
T07311
Symbol
ptchd1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xgl04990
]
120790025 (ptchd1)
Domain-containing proteins not elsewhere classified [BR:
xgl04990
]
Other domain-containing proteins
Patched domain-containing proteins
120790025 (ptchd1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sterol-sensing
Patched
Motif
Other DBs
NCBI-GeneID:
120790025
NCBI-ProteinID:
XP_039983200
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All DBs
Position
LG5:18929034..18941209
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AA seq
903 aa
AA seq
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MLRQVLHAGLRHSFHALGRFVASHPVFFASAPVLLSILLGASFSRYRVEEDVESLLAPKH
SLAKIEGNLVESLFPVNRSKHALYSDLQTPGRYGRVIVTTRKGSVLDPVHLDTILKLHRR
IYQMQVTVPATGFNSFNYSFSYLCLPDDKNVCIIDDIIRAMEEIQSARTSNRSVPVLRYP
ITQLADGRQAYIGHQLGGVQGWGPSGAVRVLGTGPRGEGVRSARALQLTYYLQARGGLMD
RVASQWEKAFCAELQHFAALHPKLGLYPTTSSSLRTDFQFSSVLARRPLLASLGVCGVLA
VLCCSMRDCVRSKPWLGLLALLSVTLSGLTAAGILNLTGATYNSTYLGIPFVMLGHGLFG
SFEMLSSWRRTREDQHVKERVASVFEDVMLRFSGSTMLHLMTLGLAASPLTNMEAVRLFC
RTAALAVTISYVYMLSFYSSCLVFTGYLENGYRHGCFCRRVPKPDQLDSKPAWYRCLMYT
RYQDETQTTNPPHGDSHLLLGCVRRCYGDWITNTYVKPFVVLLYLVYISFGLMGFLQVTQ
GSDPSALVAMDTTTVMYTRAQQRYFSSYSPVIGFYIYESAPYWNASVQRDLLEYAKGFQR
ISWLEAYLSYLSDRNQSTSQPRENFTRTLRHSFLREPQFAHFADDIIFAERGQGEEPDVA
ASRIFLVAKTTENKREEMSVLLDTLRRLSLTSRVRFLIFNPSFVYLDRYAAAVSSPLRHS
LLAVLFLLGLSSLAVVEPLVSVWLGLTLLSVQFGVLGFMTLWGVELDCMSVLCLISALGH
SADCSGPLLCGFASGRGESRTRWVRVALERHGVPSLQTLICYSAALVPVGSVRSNLTRTL
FRCLTLTAGCSALHTLAFLPTLLTFLPPSKSRGHRPGGEGQRQEVECVEMNDSTRVVDQI
TTV
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccaggtgttgcacgcgggcctgaggcactccttccacgcgctgggccggttc
gtggcgagccacccggtgttcttcgcctcggcgcccgtgctcctctccatcctgctcggg
gccagcttcagccggtaccgcgtggaggaggacgtggagagcctgctcgcgcccaagcac
agcctggccaagatagagggcaacctcgtggagagcctcttcccggtgaaccgctccaag
cacgcgctctactccgacctgcagacgcccggccgatacgggcgcgtgatcgtcaccacc
cgaaaggggagcgtgctggacccggttcacctggacaccatactaaagctccacaggcgc
atctaccagatgcaggtgacggtcccggccacaggcttcaacagcttcaactactccttc
tcttacctctgcctccccgacgacaagaatgtctgcatcatcgatgatattattcgcgcc
atggaggagatccaatcggctcgcacctccaaccgctctgtcccagtcctgcggtacccg
atcacgcagctggcagacgggcggcaggcgtacattggacaccagctgggcggggtgcaa
ggatggggccccagcggggcggtgcgagttctggggacgggacccaggggtgaaggtgta
cgttctgcccgggcattgcagctcacctactacctccaagcccgcggcggcctgatggac
cgggtggccagccagtgggaaaaggccttctgcgcagagttgcagcactttgcagcgttg
cacccgaagctggggctctaccctaccacttcctcttctctgaggacagacttccagttt
tcttcggtgctggcacgacgccccctgttggccagcttgggggtgtgcggtgtgctggcc
gtcctctgctgctctatgagggactgtgtgaggtccaaaccctggttgggactgctggct
ttgctgtcagtcacactgtcaggcctcaccgctgcagggatactcaacctgactggggcc
acctacaactctacatacctgggcatccccttcgtcatgcttggtcatgggctcttcggc
tccttcgagatgctgtcgtcgtggaggcgaacccgagaggaccagcatgtgaaggagcgc
gtggcgagcgtctttgaggatgtcatgctgcgtttctctggatccaccatgctccacctg
atgaccctgggcctggccgcctcgccgcttaccaacatggaggccgtccgtctcttctgc
cgcacggccgccttagccgtcaccatcagctacgtttacatgctgtccttctacagttcc
tgtctggtgttcacaggatacttggagaacggatacagacatggctgcttctgccgaaga
gtcccgaaaccagaccagctggactcgaaaccggcctggtacaggtgtttaatgtacacc
cgttaccaggacgagactcaaacgaccaacccaccacatggggactctcaccttttgctg
ggctgtgtgaggcgttgctacggagactggatcactaacacttatgtcaaaccctttgtg
gttctgctgtacctggtttacatctcctttggattgatgggcttcctacaggtgacccag
ggttctgaccccagtgcgctggttgccatggatacaacaacagtaatgtacacccgtgcc
cagcagagatacttcagctcatactcccctgtcattggattttatatctatgaaagcgcc
ccctactggaatgcctcagtgcagcgggacctgctggaatacgccaaagggttccagagg
atcagctggctggaagcctacctgagctacctgtcagaccgcaaccagtccaccagccag
ccgagggaaaacttcacccgcacactccgccactccttcctccgcgagccacagtttgcc
cactttgcagacgacatcatattcgcagagcggggtcagggcgaggagcctgacgtggcc
gcgtcacggatcttcctggtggccaagacgacggagaacaaacgcgaggagatgtcagtg
ctgctggacacgctgcgacgcctgtcgctgacctcgcgtgttcgcttcctaatcttcaac
ccctccttcgtctacctggaccgctacgcagcggcggtgagctcccccctcagacactca
ctgctggcggtgctcttcctgttgggtctgtcctccctggccgtcgtggagccactggtc
tccgtgtggctgggccttactctgctctccgtgcagttcggggtgctgggcttcatgacc
ttatggggtgtggagctggactgcatgtctgtgttgtgtctgatctcagctttggggcac
tcggcagactgcagcggccccctcctctgtggctttgcctcaggtcggggtgaaagcagg
actcgctgggtgagagtggcgttggagagacacggcgttccctctctacagacgctcatc
tgctacagcgctgccctggtgcctgttggttctgtacgctccaacctcacacgcacactg
tttcgctgcctcaccctcacggctggctgctcggccttgcatacgctggcgttcctgccc
accctcctcaccttcctgcccccctccaagagccggggccaccggcctggaggagagggg
cagagacaggaggtggagtgtgttgaaatgaacgacagcacccgagtggtcgaccagatc
accactgtctga
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