Xiphias gladius (swordfish): 120790030
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Entry
120790030 CDS
T07311
Symbol
rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6 isoform X1
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120790030 (rnf6)
Enzymes [BR:
xgl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120790030 (rnf6)
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120790030 (rnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF6_N
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
120790030
NCBI-ProteinID:
XP_039983206
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Position
LG5
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AA seq
719 aa
AA seq
DB search
MDPPGGGDERRRQAERLRREEAYYHFINELSEEEYRLMRDSNLLGTPGEVTAEELRQRLD
GAKERVSSQPRTEQRSQTTDSGEQQSSSGEGEETGAGGRRGAGGTEPGAETSNGDSLLEW
LNTFRRTGNATRSGQSGNQTWRAVSRTNPNSGEFRFSLEININHDQPEPGEHNDTVDTAE
LPVIAPNTTSPSIRATSSFSNPRPSAMSRPAPYPSPRPALSRRMQTRRTRSSNTTLSMSP
PALPAPVAPPVAVQRRGATLHSLAPPPTVPNPPLDQTMPSQHQALSAEVEQGRDDMSAPI
DCPCVSPQSGTQAPAGGHESRGSRTRSRGRARRAVAGGGVSSRLSRRSRSPLHRIPVVST
TPPSSSGVSGSSIHTVEPGSGTSSVSMETGEAGAEPAALTEPAVETGEREGEAHVVGAGG
SAVRRHPTIMLDLQVRRIRPGENRDRDSIASRTRSRARVAENTVTFESDSGGFRRTISRS
ERAGIRTYVSTIRIPLRRISETGLGEPNSTALRSILRQIMTGFGELSSLMETEADSETVA
PSHTDAIGTNSNTSPASRLHTNESSVGQVGTGGVDQEMVGLVGSEEDQGGQARLGGGVVS
TTEGRATSRDTNNLVENGTLPILRLAHFFLLNDEEDDEHPRGLTKEQIDNLSTRTYGQAS
LEGENGRACSVCINEYAQGNKLRRLPCSHEFHIHCIDRWLSENNTCPICRQPILAVHHD
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggaccctcctggtgggggagacgaacggcggaggcaggcagagcgtcttcgacgggag
gaggcatactatcacttcatcaatgaattgagtgaagaggagtaccgcctaatgagagac
agcaacctgctgggcacccctggggaggtaactgctgaggagctgcggcagcgtcttgat
ggagcaaaagagcgtgtttcatctcagccccgtaccgagcagcgctcgcagactactgat
tctggagaacagcagagcagtagcggtgagggagaggagacaggggctggagggagacga
ggggcagggggcacagagcctggagcagaaacctctaatggtgactcattactggagtgg
ctgaacactttcagacgtaccggtaatgctactcgcagtgggcagagtggcaaccagaca
tggcgtgctgtcagtcggaccaaccctaacagtggagaattccgctttagcttggagatc
aacatcaaccacgatcagccagagccgggggagcataatgacaccgtggacactgcagag
cttccagtgattgccccaaatacaacttcaccctctatacgtgctacctcctccttctcc
aaccctcgcccttcagccatgtcaaggccagctccgtacccctctccccgcccagccctc
agtaggaggatgcagacacggcgtacacgcagcagcaataccactctttcgatgagcccc
ccagcacttcctgcaccagtggcccccccagttgctgttcagaggagaggtgccactttg
cactctttagcaccacctcccactgttcccaaccctccccttgatcaaactatgccttcc
caacatcaagccctcagtgcagaagtagagcaggggcgtgatgatatgtctgctcctata
gactgtccctgtgtatcaccccagtctgggactcaggccccagcagggggacatgaatca
cgtggcagtaggactcgatcgcgtggtcgtgcacgcagggctgtagcagggggtggggtt
tcatcccgcttatctaggcgaagccgttcccccttgcaccgaatacctgttgtcagcacc
actccaccatccagcagtggtgtcagtggctctagcatccacactgttgagccaggcagt
ggcacaagctctgtttccatggagacaggggaggctggtgcagaacctgcagctcttacg
gagccagctgtagagacaggagaacgtgagggtgaagcgcatgtagtaggagcgggaggt
tcagcggtgcgacggcacccaaccattatgttggacctgcaggtgagaaggattcgacct
ggtgaaaaccgcgatagggacagcatcgccagcagaacacgctcacgtgcgcgggttgct
gagaatactgtcacatttgaaagtgacagtggtggatttagacgcaccatctcccgctct
gagcgggctgggatccgcacctatgtgagcactatccggattccactgaggcgtatcagt
gagacaggcctcggggaacctaactccaccgcactgcgttccattttgcgccagattatg
actggatttggggagctcagctctctgatggagacagaggctgattctgaaactgttgca
cctagccatacagatgctattggcacaaatagtaacactagcccagccagtcgtctgcat
acaaatgagagctcagttggccaggttggcacaggtggggtagatcaggagatggtgggg
ctggtgggaagtgaagaggaccagggtgggcaggccagactcggaggaggggtagtgagt
actacagaaggacgtgccacaagcagagacacaaacaacctggtagaaaatggtacttta
cccatcctgcggctggcacatttcttcctgcttaatgatgaagaggatgatgaacaccct
aggggcctgaccaaagagcagatcgacaatttatccacacgcacctatggtcaggccagc
ctggagggagagaatggtcgtgcgtgcagtgtctgcatcaatgagtatgcccagggcaac
aagctgcgccgtctgccttgctctcatgaattccacatccactgcatcgaccgctggctc
tctgaaaacaacacctgccccatctgcaggcagcccatacttgcagtacatcatgactga
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