Xiphias gladius (swordfish): 120790040
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Entry
120790040 CDS
T07311
Symbol
prpf4bb
Name
(RefSeq) pre-mRNA processing factor 4Bb
KO
K08827
serine/threonine-protein kinase PRP4 [EC:
2.7.11.1
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xgl01001
]
120790040 (prpf4bb)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xgl03041
]
120790040 (prpf4bb)
Enzymes [BR:
xgl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120790040 (prpf4bb)
Protein kinases [BR:
xgl01001
]
Serine/threonine kinases: CMGC group
DYRK family [OT]
120790040 (prpf4bb)
Spliceosome [BR:
xgl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120790040 (prpf4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Pox_ser-thr_kin
CoV_S1_C
Pkinase_fungal
CSTF_C
Motif
Other DBs
NCBI-GeneID:
120790040
NCBI-ProteinID:
XP_039983226
LinkDB
All DBs
Position
LG5:complement(17270015..17280111)
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AA seq
1017 aa
AA seq
DB search
MADVEMDIASRRMNNGNEHVKQDLESHERSGNEDSGDMSEEEEEEEEEAETNGEKTEEGS
KHHSSSGKHKRKKHKHRSKHKKHKHAFDEDKDRKRRHRHKHRKHKRKEGSSPSGAGLFGS
SSHRKIESSPSSGNPSLDDRALLEDLEKQRAMIKAELDSQLMEGKVQSGMGLILQGYNSG
SEEDGDARVRNGEQRQRGSSGKPISPRGGKSGKSRRDSTEGSKSSSKRRSRSKSAERPAK
ESKQDKVTKSTKDTGVKDRGRGRSRSKDRKRSDSTERSKEKRKSNSPSSWRGEQKGSRTD
KRPSPQRDDRPNQERATRRSRSPGRDRPSRSDADRDKRPAKSPSKDASSGKENRSPHRRG
PHSPPRKRSASPRHRDAHHSSASATDRTSKQSHSPSRTRSPHRRGRSRSPDARRRDADRQ
DSPLRKRLRADAGPGRDRSRENSPRSSSRRRISRSPLRRRSPSPRRRSRSSPRRRSRSPL
RHRSDDRDRYGRLRQYRRSMSRDRVRRRRRSRDEDKFKGSLSEGMKADQESSEEDVLEDF
DGEEIDEEALIEQRRQQRMAIVQKYKVVNEDTNMGSEPSSPQSSTRSRSPSPDDILERVA
ADVKEYERENLNTFEANIKAKHNLIAQEKDGANPKKPSAPDMFTESDDMFAADFDSARMR
AAGVGKDFKENPNLRDNWTDAEGYYRVNIGETLDKRYDVYGYTGQGVFSNVIRARDTARA
GQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPL
SMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTIL
KLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKPYDYGIDMWSVGCTLYELYTGKILFP
GSSNNHMIKLAMDLKGKMPNKMIRKGLFKDQHFDQNLNFLYIEVDKVTEREKVTVMSTIN
PTKDLLADMIGGQRLPEDQRKKVMQLKDLLDGTLMLDPAKRISINQALQHPFIQEKI
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgttgagatggacatcgcgtccagaagaatgaataatggcaacgaacacgtg
aagcaggatctggaaagccatgaaagaagtgggaatgaggacagtggagacatgtctgag
gaagaagaggaggaagaggaggaggcagaaactaatggtgagaagacagaggaggggtcc
aaacatcatagcagcagcggtaaacacaagaggaaaaaacacaagcatcgtagtaagcac
aaaaaacacaaacatgcctttgatgaggacaaggaccgcaaacgcagacatcgtcataaa
cacaggaaacacaaacgcaaagagggctcttctccctctggtgctggcctctttggctcc
tccagccatagaaaaattgaatcctctccctcctctggaaatccaagtctggacgacaga
gccttgctggaggatttggagaagcagagggccatgatcaaagctgagctggacagccag
ttgatggagggcaaggttcaatccggcatgggcttgatccttcagggttataactctgga
tcagaagaggatggagatgcgagggtaagaaatggagaacagcgtcaaaggggtagctca
ggtaaacccatatctcccagagggggaaaaagtgggaaatcaagacgggactcaacagag
ggaagtaagtccagctccaagcgtcgtagtcgaagtaagtctgcggagaggcctgctaag
gagtctaagcaggacaaggtgaccaaaagcacgaaggacacaggtgtaaaggacagaggc
cgcggcaggagcaggtcgaaagacagaaagcgttcagacagcactgagaggtccaaggag
aaaaggaagtctaactctccctccagctggagaggagagcagaaaggcagccgcactgat
aagcgtccgtctccacagcgggacgacagaccgaaccaggaaagagcaacccgacggtcc
agatcacctggacgagatcgaccaagtcgctctgacgctgaccgggacaagcggccagcc
aaatctccatccaaggatgcttcatcggggaaagagaaccgctcccctcatagacgagga
cctcacagccccccgaggaaacgcagtgcttcccctcgccacagagatgcccaccactcc
tcggctagtgccacagacaggacatcaaaacagagccactctccatcaagaacaaggtcc
ccccacaggagaggccgcagtcgctcaccagatgccagaaggagggatgctgacaggcag
gattcaccactgaggaagcgcctgcgggcagatgcaggaccaggcagagacagatcacga
gaaaacagtcccagatcatcctcacgccgtaggattagtcgctcacccctgagacggagg
tccccatcaccacgacgacgctcccgctcttccccccgcagacggagcaggtctccactg
agacacaggtctgacgacagagacagatatggtaggctcagacagtatcgacgctcaatg
tcccgcgatcgggtgaggagaagacggcgcagcagagatgaagataagttcaagggtagc
ctttcggagggtatgaaggcagaccaggaatcctcagaggaagatgtgttggaagacttt
gatggtgaagagatagatgaagaagccctcattgaacagcgccgccagcagcgcatggct
attgtccagaaatacaaggttgtcaatgaagataccaatatggggtcggagcccagcagc
ccccagagcagcacccgcagccgttcaccctcacctgatgacatcctggagcgagtagct
gcagacgtcaaagagtatgaacgcgagaacctcaacacttttgaggccaacatcaaagcc
aagcacaacctcatcgcccaggagaaagacggagccaatccaaagaagccttcagcccct
gacatgtttacagagtcagatgacatgtttgctgctgactttgatagtgccaggatgaga
gcggcaggtgtaggaaaggacttcaaggagaaccccaaccttagggacaattggactgat
gctgagggttactaccgggtgaacatcggagagacactggacaagcgctatgatgtgtat
ggctacactggccagggcgtgttcagcaacgtgatcagggccagggacactgcaagggcc
ggccaggaggtggcagtcaagatcatccgaaacaacgagctcatgcagaagactggtttg
aaagagttggaattcctcaagaagctgaatgacgctgatccagatgacaagtttcactgc
cttcgccttttcaggcacttttaccacaagcagcatctttgtctggtattcgagcctctc
agtatgaatttacgagaggtgctgaagaaatacggcaaagatgtagggctccatatcaag
gctgtgcgctcctacagccagcagctgttcttggccctcaagctgctcaaacggtgcaac
atcctccacgctgacatcaagcctgacaatatcctggtgaatgagtcaaagaccattctg
aagctgtgcgactttggttctgcatcccacgttgctgacaatgacatcacaccatacctg
gtcagcagattttacagagctccagaaatcatcataggaaagccgtatgactatgggatt
gacatgtggtctgtcggctgcactttatacgagctttacactggcaagatcctgtttccc
ggatcttccaacaatcacatgatcaaactagctatggacctcaagggcaagatgcccaac
aagatgatccgtaaaggcttgttcaaagatcagcactttgatcagaatttgaacttcctg
tacattgaagtagacaaagtaacagagagggagaaggtgacggtgatgagcaccatcaac
cccaccaaagacctgctggcggacatgataggaggccaacgcctgcctgaggaccagagg
aagaaggtgatgcaactgaaggacctgctggatggcaccctgatgctggacccagccaaa
cgcatcagtatcaaccaggctctgcagcacccctttatccaggagaagatataa
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