Xiphias gladius (swordfish): 120790076
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Entry
120790076 CDS
T07311
Symbol
vps41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04140
Autophagy - animal
xgl04148
Efferocytosis
xgl05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120790076 (vps41)
04148 Efferocytosis
120790076 (vps41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120790076 (vps41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120790076 (vps41)
Membrane trafficking [BR:
xgl04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
120790076 (vps41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
Beta-prop_RIG_2nd
zf_RING_Vps8_fungal
Beta-prop_HPS5
WD40_WDHD1_1st
Vps39_1
WD40_Prp19
Beta-prop_EML_2
TPR_7
TPR_19
zf_RING_Vps8
TPR_PEP5_VPS11
TPR_17
TPR_GEMI5
Beta-prop_IFT140_2nd
zf-Vps39_C
Helicase_PWI
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
120790076
NCBI-ProteinID:
XP_039983286
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Position
LG5:complement(16402096..16419553)
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AA seq
857 aa
AA seq
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MAEVEEGRKTSEEFTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLALG
THFGKVFLLDIQGNVTQKFEISSVKINQISLDESGEHVGICSEDGKVQVFGLYTREGFHE
NFDCPIKVVALHPQFTRSNYKQFVTGGNKLLLYERNWLNRWKTSVLHEGEGSITNIQWRA
NLIAWANNVGVKIYDISTKQRITNVLRDNVSLRPDMYPCSLCWKDNTTLIVGWGTSIKIC
VVKERNPTEMRDLPSRYVEIVSAFETEFFISGLAPLADQLVTLFFVKENSDHMDEEFRAR
PRLDIIQPLPESCEEISSDALTVRNFQDNECRDYRLEHSEGESLFYIISPKDIVVAKERD
QDDHIDWLLEKKKYEEALMAAEISFKNIKRHDVQKIGMSYINHLVEKGDYDSAARKCQKV
LGKNMELWENEVYRFKTIGQLKAISQYLPRGDLRLRPAIYEMILHEFLRTDYEGFATLIR
EWPGELYNNMAIVQAVTDHLKKDPTNSTLLTTLAELYTYDQRYDRALEIYLRLRHKDVYQ
LIHKHNLFSSIEDKIVLLMDFDKEKAVDMLLDNEDKISTDRVVEELAHRPELLHVYLHKL
FKRDHHKGQKYHERQIGLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVFLLS
RMGNCRRALQMIMEELEDVDKAIEFAKEQDDAELWEDLISYSIDKPPFITGLLNNIGTHV
DPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLQKMHRTQMR
GVRVDEENICESCHATILPSDMAKPFSVVVFHCRHMFHKECLPSQGTVNNCIPGVQFCNI
CSAKRRGPGSGILEMKK
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagtggaggagggaagaaaaacaagtgaggaattcacagatgagtctgaggag
gaggaaagcgaggaggagcccaagctgaagtatgagaggctctccaatggggtgaccgaa
atcctccagaaggatgcagccagctgtatgaccgtccatgacaagtttcttgccctaggt
acccattttggaaaggtcttcctgctggacatccaaggaaatgtaactcagaagtttgaa
attagttcagtgaagatcaaccagatcagtctggatgaaagtggagaacatgtgggcatc
tgctccgaggatgggaaggttcaagtgttcggtctctacacaagagagggcttccatgag
aactttgactgtcccatcaaagtggtagcgttacaccctcagttcaccagatcaaactac
aaacagtttgtcactgggggcaacaagcttcttctgtatgaaagaaactggttgaatcgc
tggaagacgtctgttctacatgaaggcgagggctccatcactaatatccagtggagagct
aatctcattgcctgggcaaacaatgtgggagttaaaatctatgacatcagcacaaaacag
cggatcaccaatgtgctgcgagataatgtcagtctaaggcctgatatgtacccatgcagc
ctttgttggaaagacaacaccactctcattgttggctggggtacttccattaagatttgt
gttgtgaaagagcgaaatccgacggaaatgagagatctgccaagccgctatgtggaaata
gtgtctgcgtttgagacagagtttttcatcagtggcctggcaccgctggcagatcagctg
gtcaccctgttctttgtgaaggagaactctgatcacatggatgaggagtttcgtgcacgg
ccccgtctggacatcatccagcccctccccgagagctgcgaggaaatttcatcagacgcg
ctgactgtacgcaacttccaagacaacgagtgcagagactatcgcctcgagcattcagag
ggagagtcgcttttctacatcatcagtcccaaagacattgtagtggccaaggagcgagac
caagatgaccatatcgattggctgcttgaaaagaagaaatatgaggaggctctgatggct
gcagagatcagcttcaaaaacattaagagacatgatgttcagaaaattgggatgtcttac
atcaaccatttagtggagaaaggagactatgacagcgctgcgaggaagtgtcaaaaagtt
cttgggaaaaacatggaactatgggaaaatgaagtctacaggttcaagaccattggacag
ctgaaggccatcagtcaatatttaccgagaggagatttgcgtctcagaccggccatctat
gagatgatcttacacgaattccttagaactgattatgagggttttgccacactgatccgg
gaatggcctggagagctttacaataacatggccattgttcaggctgtcacagatcacctg
aagaaggatcccactaacagcactttgctcaccacactggctgaactgtacacctacgac
cagcggtacgaccgagccttagaaatctacctgagactgaggcacaaagatgtttaccag
ctgatccacaaacacaaccttttctcatccatagaggacaagatcgtacttctcatggac
tttgataaagagaaagctgttgacatgctcctcgacaatgaagacaaaatatcaacagac
agggtggtcgaagaacttgcacacaggcccgagctcctgcatgtgtatctccataaatta
ttcaagcgggaccaccacaaaggccaaaagtaccacgagaggcagattggcctgtatgcc
gagtatgaccgacctaatctcttgcctttcctgagagatagcacacactgcccgcttgaa
aaggctcttgagatttgtcagcagaggaactttgtagaggagaccgtcttcctgctcagc
aggatggggaactgcagacgagctctgcagatgatcatggaggagctggaggacgtagac
aaagccatagagtttgctaaagagcaggatgatgcagaactgtgggaggatctcatctct
tactctattgacaaaccaccattcatcactggccttcttaataatattggtactcatgtg
gatcccattctgctcatccatcgcataaaggagggcatggagatcccaaacctcagagat
tcactagtgaaaatccttcaggactacaatctacagattctgttgagagaaggctgtaag
aagatcctggtggccgactccctctccctgctacagaagatgcaccgaacacagatgaga
ggggtcagggtcgatgaggagaacatttgtgaatcatgccatgctacaatattaccatca
gacatggccaaacccttcagcgtggtggtgtttcactgcagacacatgtttcacaaagaa
tgtttgccatctcaaggaacagtaaataactgcattcctggggtccagttttgtaacatc
tgcagtgcgaagaggcgagggccaggaagtggaatacttgagatgaaaaagtaa
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