Xiphias gladius (swordfish): 120790091
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Entry
120790091 CDS
T07311
Symbol
smarcd3b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120790091 (smarcd3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xgl03021
]
120790091 (smarcd3b)
03036 Chromosome and associated proteins [BR:
xgl03036
]
120790091 (smarcd3b)
Transcription machinery [BR:
xgl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120790091 (smarcd3b)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120790091 (smarcd3b)
PBAF complex
120790091 (smarcd3b)
GBAF(ncBAF) complex
120790091 (smarcd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
TFIIA
Ribosomal_uS5m_N
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
120790091
NCBI-ProteinID:
XP_039983308
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Position
LG5:16780528..16810181
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AA seq
517 aa
AA seq
DB search
MATEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPFGGSPTVRPGL
PSPVMEPSRKRPAPSQQVQQQQQQQQQQQQQQAVQNRARKKPVGFPGANEMPARQMDMRE
PQSDPTLGSNAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEAL
KRPMKQQKRKLRLYISNTFNPARPDADDSDGSIASWELRVEGKLLDDPGKQKKKFSSFFK
SLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLD
PRLARLLGIHTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIP
QRLTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLKSQMSSFLLSTANQQEIA
SLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEERR
AAFYHEPWSQEAVSRYFYCKIQQRRQELEQALAVRNT
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggctacggaggagacggcggggggagccaggaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcctggcatgccgtctggagcgaggatgccccaccaggga
gctcccatgggcccccctggcccaccattcggagggagcccgacggtgcggcccggcctg
ccctccccagtgatggagcccagtcgtaagaggcctgccccctcccagcaggtccagcag
cagcagcagcagcaacagcagcagcagcaacagcaggccgtccagaaccgggccagaaag
aagccagttggattccccggagccaacgagatgccggcgaggcagatggacatgagagag
ccccaatcagatcccacgctcggatcaaatgctaagagaaggaaaatggcagacaagatt
cttccgcaaaggatccgtgagctggtccctgagtctcaggcctacatggatctgctagcg
tttgagcgcaaattggaccagaccatcatgcgcaaacgtgtggacatccaggaagcactg
aagagaccaatgaagcagcaaaagcgtaaactgaggctttacatatccaacaccttcaac
cctgccagacctgatgctgatgactctgatggcagcattgcatcatgggagctgcgggtg
gaggggaagttgctggatgacccagggaagcagaagaagaagttctcttcgttttttaag
agcctggtgatcgagctggacaaagacctttatggtcctgacaaccacctggtcgagtgg
caccgcacgcctaccacccaggagacggacggcttccaggtgaagaggccaggagacgtg
agcgtgcgctgcactctgctgctgatgctggactaccagcctccccagtttaagttggac
cctcgcctggctcgcctgcttggcattcacacccagactcgctcctgcatcatccaggcc
ctctggcagtacgtcaagaccaacaagctgcaggactcgcatgacaaggagtacatcaac
tgtgacaagtacttccagcagatttttgattgcccacggctgaagttctctgagatccct
cagcgtctcaccaacctcctcctgccccctgaccccatcgtcatcaaccatgttatcagc
gtcgaccccaacgaccagaagaagacggcctgctacgacattgacgtggaagtggaagac
cccctgaagagccagatgagcagcttcctcctctccaccgccaaccagcaagaaatcgca
tcactcgacaacaagatccatgaaaccattgagtccatcaaccagttgaagatccagagg
gacttcatgctgagtttctccagagatcccaagggctacatccaggactggctcaaatcc
cagagccgagacttaaagttaatgacagacgtggtggggaaccctgaagaggagaggagg
gcggcgttttaccacgagccttggtcccaggaggccgtcagccgctatttctactgcaag
atccagcagagaagacaggagctggaacaggccttagctgtccgcaacacctaa
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integrated database retrieval system
