Xiphias gladius (swordfish): 120790187
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Entry
120790187 CDS
T07311
Symbol
cdhr5a
Name
(RefSeq) cadherin-related family member 5
KO
K16505
cadherin-related family member 5
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xgl04515
]
120790187 (cdhr5a)
Cell adhesion molecules [BR:
xgl04515
]
Cadherins
Cadherin related
120790187 (cdhr5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
120790187
NCBI-ProteinID:
XP_039983473
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Position
LG1:complement(32503474..32517093)
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AA seq
709 aa
AA seq
DB search
MELKVKSKPANGLLGCIVAVCFCALCPAQRLCTVPPGPVTVPENNTADVQVVQISTSSDV
TLTVTVNPEDLFYLKGDALMVKKGLDYESLASAALVVWVQCSRAGSRSVKESVEVLVENV
NDNPPNFAQSHYVLEVNELTPINSSVGLIEATDVDSEPLYYRLESATDKYFRLENINTPK
ILVKSLLDYDVVQKISLILHVQDTFNGSASNEPFFTSVAAVTVHVRDVDNRPPWFQPCLR
TNLGAAKLCVSPGYRGRVNLTEKEEGPLVLEPGPVFARDGDKNRSEQISYRIVRGNEGNI
FQIDEETGNVTMAKAADIVGPITLTVLASQVTNRDQFAVTQVTIEVMKKSRNPPRFEKER
YEGFIYSNSVPESMILRDRSTYRPFRVRARDEDFASGVNPDVKYEVQYSSYVNVTSDGFM
ILKRVVKTESFALQLRAVDTTTGEFGTAALSVQVIPAVAIPSPSNIGYRPGDMALLGLVM
AALLVLCLIVIGFLISRLWKGNASMDKICECLGPCLKSNQPRTGHRDSLQYTNDGFQNEG
DQGRGGGRRWNNALPRRSTFPQARGRVIPLERRSRHCSSCGVYANHVPKGSPSVRPSRRG
RGDGDEYGMRSILTKPRRREGQKTVWFKESEDSSDIEVEIIPDTVGRVEEETEEELVGEV
EMEGVVRDPAAPLREYDGGQESRSTGPSAEQDFGDTGSEKEKGGQEQEG
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaaagtgaagagcaaacctgcgaacggcctccttggatgcattgttgccgtc
tgcttttgtgcactttgcccggctcaaagactttgcacggtgccccctggtcccgtgacg
gtcccggaaaacaacacggccgacgtccaggtggtacaaatcagcaccagcagcgatgtg
acactgaccgtcacggtgaaccccgaagatctcttctacctaaagggggacgccctgatg
gtaaagaaaggactggactatgagtcgttggccagtgcagctctggtggtgtgggtgcag
tgcagcagagctggctccagatctgtgaaagagtcggttgaagttctggttgaaaacgtg
aacgacaaccccccgaactttgcacaaagccactatgtcctggaagtgaatgagctgact
ccgatcaactccagcgttgggctgatagaagctacggacgttgattcggagcctctttac
tatcgcttagagtctgcgacagataaatacttccgcctggagaacatcaacactccaaag
atactcgtaaaaagcctcctcgactacgatgtcgtacagaagatctctctgattctacat
gtgcaggacacgttcaacggttcggcctccaacgagccgttcttcacctcggtggccgcc
gtcacggttcacgtgagggacgtggataaccggcccccgtggtttcagccgtgcttgagg
acaaacctgggggccgccaagctgtgcgtgagccccggctacagaggcagagtcaacctc
accgagaaagaggaggggccgctagtgctggagccgggcccggtgttcgcgagggacgga
gacaagaaccggagcgagcagatcagctacagaatagtgcgaggaaacgagggaaatatt
ttccagattgatgaagaaacgggaaacgtcaccatggccaaagccgccgatatcgtcggg
cccataacgctcacggttctggcgtctcaggtgaccaacagggatcagtttgccgtgaca
caagtgaccatcgaggtgatgaagaagagcaggaaccctcctcgctttgagaaggagcga
tacgaaggatttatctacagcaactctgtcccggagagcatgatcctccgagaccggagc
acctaccggcccttcagggtccgagcccgggatgaggacttcgccagtggtgtgaatcca
gatgtgaaatacgaggttcagtacagcagctacgtcaacgtgacctcagacgggttcatg
atcctgaagagagtcgtgaagacggagtccttcgcgcttcagctcagagcggtggacacg
acgacaggggagttcggcacggcggccctctccgttcaggtcatacctgccgtggccatc
ccgtctccctcaaacatcggctaccgtccgggcgacatggctctcctgggtctggtcatg
gcggccctgctggtcctctgcctcatcgtgatcggcttcttgatttcccgcttgtggaag
ggaaacgccagtatggacaaaatatgcgagtgcctgggcccctgtctgaagtccaaccag
ccccggactggccacagggactccctgcagtacaccaacgacggtttccagaacgagggc
gaccaaggccgtgggggcggcaggcgctggaacaacgctctccccagacggagcaccttc
ccccaggcgcggggccgggtcattcccttggagagacggagccgccactgctcctcctgt
ggcgtctacgccaaccacgtccccaaagggagtccctcggtgagaccgtccaggaggggc
agaggagacggggacgagtacggcatgaggtcgatcctgaccaagccgaggaggagggag
ggccagaagacggtgtggttcaaagagagcgaggactcctcggacatcgaggtggagatt
atcccagacactgtgggccgggtggaggaggagaccgaggaggagctggtgggggaggtg
gagatggagggggttgtcagagacccggctgccccgctgagagagtacgacggcgggcag
gagagccggagcacagggcccagcgccgagcaggactttggagataccggctcagaaaaa
gagaagggaggccaggagcaggagggctga
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