Xiphias gladius (swordfish): 120790198
Help
Entry
120790198 CDS
T07311
Symbol
neo1a
Name
(RefSeq) neogenin 1a isoform X1
KO
K06766
neogenin
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04350
TGF-beta signaling pathway
xgl04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120790198 (neo1a)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120790198 (neo1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xgl04515
]
120790198 (neo1a)
Cell adhesion molecules [BR:
xgl04515
]
Immunoglobulin superfamily
DCC/UNC5 family
120790198 (neo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Interfer-bind
NDNF
fn3_2
Tissue_fac
C2-set_2
Sp38
Izumo-Ig
V-set_CD47
Unc5_NetrinR_N
Fn3_Dep-1_3rd
Egh16-like
EphA2_TM
TMEM154
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
120790198
NCBI-ProteinID:
XP_039983484
LinkDB
All DBs
Position
LG1
Genome browser
AA seq
1508 aa
AA seq
DB search
MAERGALSLLSLLCLTFLYTATTAAKHVDKGSAAQPFIPFWFTVEPQDTLAIRSNAAVLN
CSAHSDAATPARVEWKKDGTFMSLVSDERRHILPDGVLFFTHVVHSKHNKPDEGTYQCVA
TIDNLGSISSRTARLSVAGMPRFASQPAPATVRLGDSQVMACEVNSDLVPFTRWEKDRQP
LELSSKLAQLPSGALVISNASEADAGLYRCLVENVGTPKSSDEAQLQILPETGEERKLEF
LVQPVSVTKVVGASVLLPCVVTGYPAPHVRWMFGEKLLQESEGRVEVLGGGSLQISNLTE
EDAGVYTCMVDNSNTTIEAQAQLTVQVPPQFVKRPANIYAHESMDIVFECEVSGSPAPTV
KWVKNGDAVIPSDYFKIIKEHNLQVLGLVKSDEGFYQCLAENDAGNIQSSAQLIILDYDV
ALPSSPPPSLTPNTTDHVTPGSGGVASPAGPTPSAPRDVVASLVSTRFIKLTWRPPAEPH
GDELTYSVFYSQEGTSRERVVNTSRPGEMQVTIQNLMPDTKYRFRVVAHNSNGQGESSTA
LKVATQAEVQVPGPAPNLQAVSNAPTSVSLTWDKPLTGNGEILTYKLYYTDKSVGNEQDI
DIDGQSYTMTGLKKNAEYSFRVVANNKHGPGVSTEDIVVRTLSDVPSAPPQNLTLEVQNS
KSIMLRWQPPPLNGQNGEITGYKIRYRKGSRRSEAAETTGGTQLNKLIDGLERGTEYSFR
VSAMTVNGTGPATDWTTAETFESDLDESRVPDQPSSLHVRPLVSSIVVSWTPPENQDIVV
RGYTIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPVYESAVTR
PQSDAIHVDLYELLHPPNTPVPDPSPMMPPVGVQASVLSHDTIKVTWADNSLPKNQKITD
NRYYTVRWKTNIPANTKVKMANTTSLNHMVTGLKPNTLYEFSVMVTKGRRTSTWSMTAQG
TTFETIPSSSPKDVTVVSKENKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEVHDWVI
EPVVGNRLTHQIQELTLDTTYYFKIQARNSKGMGPMSEAVNFRTPKTESSDKMANDQASN
LPSKPGPSGNQHTIDPGSSVGKSGVGSNSENHILVIVIIISVGAFTIIVVVVGAFLCTRR
TTSHQKKKRAASKSSNGSHKYKGNSKDLKPPDLWIHHERLELKPMDKSPEPNPVMTETPI
PRTSQDITPADSSLDSNPHLQQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDAQPPQP
VISAHPIHSLDNHHHHYHMGSLASSTRSYLYHQGSGHPRPQACATPISHLDRVDSTESVR
NTPSSEPLPPAAASSQASCPSEILADHEGSYHGSTTTEEEPSYSSNLPPHRSAHPHAHAH
PLKSFAVPAIPGTSHPSYESPALPSTPLLAQTGPPTHPHVVKTASIGTLGRTRTPMAVTV
PNAPDVPETSKMLEDVDSVLASLAPCPSPAPRSNPVPLPQSYEPDELTEEMAHLEGLMKD
LNAITTAP
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcggggagctctgtcgctcctctctctcctctgtctcacctttctctacacg
gcgaccaccgcggcaaagcatgtcgacaaaggttcagcagcgcagcccttcatccccttc
tggttcacggtggagccccaggacacactggccatccggagcaacgcggcagtgctcaac
tgctcagcccacagcgatgcagccacaccggcgcgcgtagagtggaagaaggacggcacc
ttcatgagcctggtttcagacgagagacggcacatacttcccgatggcgtgctgttcttc
acccatgtggtccactccaagcacaataagcctgatgagggcacctatcagtgcgttgcc
actatcgacaacctgggctccatttcaagccgcacggcacgcctctctgtagcagggatg
cccaggtttgccagccagccagcgccggccaccgtgcgtctaggggacagtcaggtgatg
gcatgtgaggtcaactcagatctggtgcccttcacccggtgggagaaagaccgtcaaccc
ctggagctgagcagcaagttggcccagctgccaagcggagccctggtgatcagcaacgcc
tcggaggccgacgctggcctctaccgctgtctggtggaaaatgtgggtacacccaagtcc
agcgacgaggcccagctccagatactgccagaaactggagaagagaggaagctggagttc
ctggtgcagcctgtgtctgtgaccaaggtggtgggagccagcgtgctgctgccctgcgtg
gtcaccggttaccctgcgccgcacgtccgttggatgtttggagaaaagctgctacaagaa
agtgagggtcgtgtggaggttctgggaggaggcagtctccagatctccaatctcacagag
gaggatgccggcgtctacacctgcatggtggacaattctaacaccaccattgaagcccag
gcccaactcacagtacaagttcctccccagtttgtcaagcggccagccaacatttatgcc
catgagtccatggacatcgtctttgagtgtgaagtttcagggtcaccagctccaactgtc
aaatgggtcaagaatggagatgctgtcatcccgagtgactactttaaaataattaaggag
cacaacctgcaggttctgggtctagtcaagtcagatgagggtttctaccagtgccttgcg
gaaaatgatgccgggaacatccagtccagtgcccagctcatcatcttggattatgacgta
gccctgccctcttcccctcccccctcactgactcctaacactactgaccatgtaacgcca
ggctccggaggtgtagccagtccggcagggcccaccccctctgccccccgcgacgtcgtg
gcttcactggtctccacccgcttcatcaagctgacctggcgcccaccagccgaaccgcac
ggagacgagttaacctactccgttttctacagccaggaaggcactagcagggaacgagtc
gtgaacaccagccgcccaggggagatgcaggtgaccatccagaatctcatgccagacacc
aaatatcgcttcagggtggtggcccacaacagcaacggccagggcgagagctccacggcg
ctcaaagtggccacccaggctgaagtccaagtgcccggccctgctcctaacctgcaggca
gtgtcgaacgcgccgacctctgtctctctgacctgggacaagcctctcactggcaacggg
gagatcctcacctacaagttgtactacacggacaaaagcgttggcaacgaacaggacatt
gacatagacggtcagtcctacaccatgactgggctgaagaagaacgcagagtacagtttc
cgtgtggtggccaacaacaagcacggtccaggtgtctccacggaggacatcgttgttcgt
accctgtctgacgtaccaagcgcccctcctcaaaacctcactctggaggtccagaactca
aagagcatcatgcttcgctggcagccccctccccttaacggccagaatggggagatcacg
ggctacaagatccgataccggaaaggatcccggaggagtgaggcagccgagaccaccgga
ggcacccagcttaacaagctcattgatggtctggagcgcgggacagagtattccttccgg
gtgtcggccatgacggtgaacggcacgggaccggccaccgactggaccacggcagagacg
tttgagagcgacctggatgaatcccgtgtaccagaccagcccagttctctccatgtccgg
ccgctggtcagcagtatcgtggtgagctggacgccgccagagaaccaggacattgtggtg
cgcgggtacaccatcggatatggcatcggcagtccccacgctcagaccatcaaagtggac
tacaagcagcgctactacactattgagaaccttgaccccagctcccactatgtgatcaca
ctaaaggccttcaataacgtgggcgaggggattcctgtgtatgagagcgccgtcaccaga
ccacagtcagacgccatacatgttgacctgtacgaactcttacatcctccaaacacccca
gtaccagacccttcccccatgatgccacccgtgggtgttcaagcctccgtgctgagccac
gacaccatcaaggtgacctgggctgacaactcgctgcccaagaaccaaaagatcacagat
aaccgctactacacagtgagatggaagaccaacatccctgccaacactaaagtgaagatg
gccaacaccaccagcctgaaccacatggtgacaggtctgaagcccaacacgctgtacgag
ttctccgtcatggtgaccaagggccgccgcaccagcacgtggagcatgactgcacagggc
acaacatttgagaccatccccagctcctctccgaaagacgtgactgtggtgagcaaagag
aacaaaccccgcaccataattgtcaactggcagcctccctccgaggccaatggaaagatc
acgggctatattatctactacagcacagatgtaaacgctgaggtccacgactgggttatc
gaaccggtggtgggcaaccgtctgactcaccagatccaggagctgacgctggacaccacc
tactacttcaagatccaggcccgaaactcgaagggcatgggccccatgtctgaggccgta
aatttccgcaccccaaagactgagtcctctgacaaaatggctaatgaccaagcctcaaat
cttccgtcgaagccagggccttcaggcaaccaacatacaattgacccgggatcttcagtt
ggtaaatcaggggtgggaagcaacagtgaaaatcacatcctggtcattgtcatcatcatc
tcagtgggagccttcaccatcatagtggtggtggtgggggccttcctgtgcacacggcgc
accacgtcccatcaaaaaaaaaagcgggctgcctcaaagtcctcaaacggctcccacaaa
tacaagggaaactccaaggacttgaagccacctgatctttggatccaccatgagaggctg
gaactcaagcccatggacaagtcgccggagcccaacccagtcatgaccgaaacgcccatc
ccccgcacctcgcaggacatcacgccggccgacagcagcctggacagcaacccccaccta
caacagaggcgcaactcctaccgcggccacgaatcagaggacagcatgtctacactagca
ggccggcgagggatgaggcctaaaatgatgatgccttttgacgcacagccgcctcagcct
gtgattagtgctcaccccatccattcccttgataaccatcaccaccattatcacatgggc
agcctggcatcgtcgacacgaagctacctctaccaccagggcagcgggcacccacgcccg
caggcctgtgccacccccatctcccatctagacagggtggactcgacagaatcggtgagg
aacacccccagttcagaacccctccctccagccgccgcctcctcccaggcctcttgcccc
tcggagatcctggccgaccatgagggcagctatcacggctccaccaccacagaggaggag
cccagctactccagcaacctgcccccacaccgctcagcccacccgcacgcccacgcccac
ccgctcaagagctttgctgtaccggcaatcccgggcaccagccatccatcatacgagtcg
cctgccctgcccagcactcccctgctcgctcagaccgggcctcccactcacccccacgtt
gttaaaacagcctccattggaacactaggaaggacccgcacaccgatggcagtcactgtg
cccaacgcccctgatgtgccagagactagcaagatgctagaagatgtagacagcgtgctt
gcctcccttgccccctgcccctcccccgcccctcgcagtaaccctgttcctctccctcag
agctacgagcccgacgagctgaccgaggagatggcccacctcgagggcctgatgaaggac
ctgaacgccattaccacagcgccatga
DBGET
integrated database retrieval system
