Xiphias gladius (swordfish): 120790329
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Entry
120790329 CDS
T07311
Name
(RefSeq) desmoglein-2-like
KO
K07597
desmoglein 2
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120790329
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xgl04515
]
120790329
Cell adhesion molecules [BR:
xgl04515
]
Cadherins
Major cadherins
120790329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
120790329
NCBI-ProteinID:
XP_039983657
LinkDB
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Position
LG6:31166623..31197363
Genome browser
AA seq
1101 aa
AA seq
DB search
MIQVTSPVFVLLLFVFQAVVVRANSGDNLVRNRREWIPPPKPLEENVDYTQQSSIARIHS
DFDDGKGNIQYSLEGIGANQYPFHVFVVDPKSGHIRVTKVLDREFIDTYYLSGVATYSDG
RLAEKKIDIRFKVVDENDNAPVFGAIKHGEVDELSPAGTSVMKISATDADEPGHVNSQIA
YTIIDQNPPDDMFYITTEGTIYVKKLLDREKEDHYTLMVKGQDLNGKPGGNIGTSTVTIK
VRDVNDNLPTLEKEEYEGSIEENTQGVEVMRIKAEDLDQVGTDNWEAVFDIVKGNEAGYF
SIRTDPNTNEGILMLDKAVNYEDVKDLELGLTVRNKAPPFDGSVVNAGAGIGFAGGAGGA
GGEGGAGGAGGTGGAGGTRVGSGGSSWQSGTYFKTYPIKVNVKNQPEGPRFDPKVKAIPI
SEGGHSINIKDVIARYPAIDGDTGKPAENVRYAKGSDPDNWLTIDPKTAEIKLNKMPDRE
SPFLVNGTYIAKVLCITEDMPAETATGTVAIQVEDFNDHCPTLTSNIQTMCAMDDAVIVN
AKDEDAFPNGPPFDFVIVPEGTEGKWQVEHLNDTAAILRALVSPWPGFYEVEFVVRDEQG
DACPEPQKMRVQVCTCEDGVVCGKKGTNGQPNKRAELGPAGIGLLFLGLLLLALIPLLLL
FCQWGGAAGLSGGFTEIPFDTKSHLINYRTEGQGENTEVPLLNMPAQMDGDMANVVIGMA
SKTSAMAQSVTSIDGINRAIYQGGFGSDHMKGTWGMMNQQIGSGFYSEFEGRESGGGGGI
YDGMALPDHFLGQYYTQKVTNGNKNLGVKDSLLVYDYEGQGSTAGSVGGYSLLESDNDLQ
FLNDLGPKFKTLAEVCGGKTIPTEVKQVCTPLPSASTQTSVSTFRTAPQLPPPPKLQPTS
PKTEQVVLRETSERSQMVKESMATVRGGIANQGQMVLLQQQQPVYYTTTPVLQPMHYVVQ
PQVHNTMLLAEAPATNLQGMVLVNGTQIGPAKGMVIQGQTVVSSEQYQGPNMVLVEKSGD
QEGNYNLTHTENFSGSQTMMVVEGTVPVGPMKVLKGSQTCLAQGGTLQAGGPSGSQSPGG
RRANKQWRAAGPGDRRSVQEE
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgattcaggttacttcacctgtgtttgtgcttctactgtttgtgttccaggctgttgtg
gtgagggccaactctggagacaatctggtaagaaacagaagagaatggattcccccgcca
aaaccactggaggaaaatgtagactacacacaacagtcatctattgccaggattcattca
gattttgacgatggcaaagggaatattcaatactcgctagaaggcattggtgcaaaccaa
tatcccttccatgtgtttgtggtcgaccctaaaagtggacacattcgtgtgaccaaagtg
cttgacagggagttcattgatacgtactatctgtcaggtgttgctacatacagtgacggc
aggctggcagagaaaaaaattgacatacgattcaaggttgtagatgagaatgacaatgct
ccagtttttggagccatcaagcatggggaggtggatgagctcagtcctgcagggacttca
gttatgaaaatcagtgcaactgatgctgatgaaccggggcatgtgaactctcagatcgcg
tataccatcatagatcagaatccacccgatgacatgttctacattaccactgaagggacc
atctacgtcaaaaagcttttggacagagagaaagaagatcactacactctgatggtgaaa
ggtcaagacctaaatggcaaaccagggggaaacattggaaccagcactgttaccattaag
gtccgagatgtgaatgacaaccttcccactctggaaaaagaagagtatgagggcagcatt
gaggagaacacacagggtgtggaagtgatgagaatcaaagcagaggacctggaccaggtt
ggcacagacaactgggaagctgtgtttgatattgtcaaaggcaacgaggctgggtacttc
agcattagaacagaccccaacaccaacgagggcatcctaatgctcgacaaggctgtgaat
tatgaggatgtcaaagaccttgaactaggactaactgtgagaaacaaggctccaccattt
gatggatcggtggtaaatgctggagctggtataggttttgcaggtggagcaggtggagca
ggtggagaaggtggagcaggtggagcagggggtacagggggggcagggggaacaagagtt
ggatctggaggatcatcatggcaaagtgggacatattttaaaacctatccaatcaaagtc
aatgtgaagaaccagcctgaagggccacgttttgaccccaaagtcaaagccattcccatc
tcagagggtggccactccatcaacattaaagatgttattgcccgctaccctgcaatagat
ggagacactgggaaaccagctgagaatgtcaggtatgccaagggctcagaccctgacaac
tggctaaccatcgacccaaagacagctgagatcaaactgaacaagatgcctgacagagaa
tctccattccttgttaatgggacatatattgccaaagtactctgcattacagaagacatg
cctgcagaaacagccaccggcactgtggccatccaggtggaagattttaatgaccactgc
cccaccctgaccagtaacatccagactatgtgtgctatggatgatgctgttattgtgaac
gctaaagatgaggatgcatttcctaacggacctccttttgactttgtcattgtcccagaa
ggaactgagggcaagtggcaagtggagcatcttaatgacactgcagctatcctgagggcc
ctggtgtccccatggcctggtttctatgaggtggagtttgtggtgagggacgagcaggga
gatgcctgtccagaaccacagaaaatgagagtccaagtttgtacctgtgaggatggagta
gtgtgtgggaaaaaaggcaccaatggtcagcccaacaaaagagcagagttaggtcctgca
ggcattggactgttattcctgggccttctactgttggcgctcattcctctgttgctgctc
ttctgccaatgggggggggctgcgggtctgtcagggggctttactgaaatacctttcgac
accaaatcacacctcattaactaccgcactgagggccaaggagagaacacggaagtgcca
ctgctgaacatgccagcacaaatggatggagatatggcaaatgtggttatcggcatggct
agcaaaacttcagcaatggcgcagtcagtcacttccattgatgggataaacagggccatc
tatcaaggaggttttggaagtgaccatatgaaaggaacatgggggatgatgaaccagcaa
atcggcagtggcttctactctgagtttgaaggcagagaatcgggaggaggtggcggaatt
tatgatggcatggctctgccagaccacttccttggacaatactacactcagaaggtgaca
aatggaaacaagaatcttggagtgaaggacagtctgttggtttatgactatgaaggtcag
ggttctactgctggttcagtgggcggctacagcctcctggagtctgacaacgacctacag
ttcctcaatgacctcggaccaaagtttaaaaccctggctgaggtgtgtggaggcaagaca
atcccaactgaagtcaaacaagtgtgcactcctctgcccagtgcctccactcagacctca
gtatcaactttcaggactgccccacagctgccccctccacccaagctgcagccaacaagc
cccaaaacagagcaggttgtgctcagggagacatctgagcgttctcagatggtgaaggaa
agcatggccaccgtgaggggagggatagcaaatcaaggccagatggtcctgctacagcag
cagcagcctgtgtactacaccaccacccctgtgctgcagccgatgcactacgtagtccag
ccacaggttcataacaccatgctgctggctgaggcaccggccaccaacctgcagggcatg
gtactggttaacggcacccagattggacctgccaaaggaatggttattcaggggcagaca
gtggtgtctagcgaacaataccagggccccaacatggtgctggtagagaagagtggggac
caggagggcaattacaatctgacccacactgaaaacttctctggctcccagaccatgatg
gtcgtggagggcacggtccctgtagggccaatgaaagtgctgaaagggagccagacctgc
ctcgctcagggaggtaccctacaggcaggagggccatcgggatctcagagtcctggtggt
cggagggccaacaaacagtggagggcagcaggtccaggagacaggaggtctgtccaagaa
gagtga
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