Xiphias gladius (swordfish): 120790368
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Entry
120790368 CDS
T07311
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03030
DNA replication
xgl03410
Base excision repair
xgl03420
Nucleotide excision repair
xgl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120790368 (rfc4)
03410 Base excision repair
120790368 (rfc4)
03420 Nucleotide excision repair
120790368 (rfc4)
03430 Mismatch repair
120790368 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xgl03032
]
120790368 (rfc4)
03036 Chromosome and associated proteins [BR:
xgl03036
]
120790368 (rfc4)
03400 DNA repair and recombination proteins [BR:
xgl03400
]
120790368 (rfc4)
DNA replication proteins [BR:
xgl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
120790368 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
120790368 (rfc4)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
120790368 (rfc4)
DNA repair and recombination proteins [BR:
xgl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
120790368 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
120790368 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_16
AAA_assoc_2
AAA_22
AAA_11
AAA_30
DUF815
AAA_24
Mg_chelatase
RuvB_N
AAA_19
AAA_28
AAA_14
SLFN-g3_helicase
ResIII
AAA_5
Gp44_lid
Cdc6_lid
DNA_pol3_gamma3
Kinesin
AAA_7
DNAX_ATPase_lid
AAA_3
Matrix_Pneumo_C
Motif
Other DBs
NCBI-GeneID:
120790368
NCBI-ProteinID:
XP_039983726
LinkDB
All DBs
Position
LG6:28777293..28789487
Genome browser
AA seq
358 aa
AA seq
DB search
MQAFLKGATVQTTRPQKDKAAAGPNTEKKAKAIPWVEKYRPKSVDEVAFQEEVVAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVREKVKN
FAHLTVAGARPDGKPCPPFKIIILDEADSMTAPAQAALRRTMEKESRTTRFCLICNYISR
IIEPLSSRCSKFRFKPLANQIQEERLLVICNKEKLKYTKQSIAALVRVSEGDLRKAITFL
QSAARLNIDKEITEAAVIEIAGVVPPKMIDNLLQICFKGTFEKLEAAVRNMVDEGYAATQ
ILSQLHESIIELDLSDKEKSAITEKMAVVGKCLSDGADEYLQMLSLCSAIMQQASQSN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcctttttgaaaggagcgactgttcagacgaccagacctcagaaagacaaggca
gcagcagggcccaatacagagaagaaagccaaagctattccttgggtcgaaaaatacagg
ccaaagtctgttgatgaggtggcctttcaggaggaggtggtagcagtgctgaagaagtct
ctggaaggagcagatcttcccaacttgcttttctatggccctcctggaacaggaaaaacc
tcaaccatcttagctgctgctagagaactttatggtccagagctttacagacagagggtg
ctagagctcaatgcctctgatgaacgcggcatccaggttgtcagagagaaggtcaagaac
tttgctcatcttaccgtggcaggggctcgtccagatgggaagccatgtcctccttttaag
atcatcatccttgatgaagcagactccatgaccgcaccagctcaggccgctctcagacgg
accatggagaaagaatcgcgcaccacccgcttctgcctcatctgtaactacatcagcagg
attatagaacctctgtcctccaggtgttccaagtttcgcttcaaacctctagccaatcag
atccaagaagagcgcctgcttgttatctgcaacaaggagaagctcaaatataccaaacag
agtatagcagcattggtgagggtgtctgagggagacctgcggaaagccatcacctttctc
cagagtgctgcgcgcctcaacatcgacaaagagatcacagaggcagctgtcattgaaata
gccggggttgtccctcccaagatgatagacaacttgctccagatctgcttcaaaggaaca
tttgagaaactagaggcagcagtcaggaacatggtggatgaaggctacgcagccacacag
atcctgagtcagctccatgagtctatcatagagcttgatctgagtgacaaggagaagtca
gctatcacagagaagatggcggttgtgggtaagtgcctgtcagatggtgcagatgagtac
cttcagatgttgagtctctgttcggccatcatgcagcaggcctcccagagtaactaa
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