Xiphias gladius (swordfish): 120790760
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Entry
120790760 CDS
T07311
Symbol
si:dkey-110c1.10
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120790760 (si:dkey-110c1.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120790760 (si:dkey-110c1.10)
04131 Membrane trafficking [BR:
xgl04131
]
120790760 (si:dkey-110c1.10)
03029 Mitochondrial biogenesis [BR:
xgl03029
]
120790760 (si:dkey-110c1.10)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xgl04812
]
120790760 (si:dkey-110c1.10)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120790760 (si:dkey-110c1.10)
mRNA cycle factors
P-body specific factors
120790760 (si:dkey-110c1.10)
Membrane trafficking [BR:
xgl04131
]
Others
Actin-binding proteins
Myosins
120790760 (si:dkey-110c1.10)
Mitochondrial biogenesis [BR:
xgl03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120790760 (si:dkey-110c1.10)
Cytoskeleton proteins [BR:
xgl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120790760 (si:dkey-110c1.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
AAA_22
AAA_16
DUF1002
Motif
Other DBs
NCBI-GeneID:
120790760
NCBI-ProteinID:
XP_039984530
LinkDB
All DBs
Position
LG6:20095650..20110665
Genome browser
AA seq
1656 aa
AA seq
DB search
MATLELYSKGASVWISDPNAVWVSAQLLQDYSPGEKHLLLELSNGKEVHYPVGSPSDLPP
LGNPDILEGENDLTALSFLHEPAVLHNLRVRFLDYSSIYTYCGIVLVAINPYDQLPIYGE
EVIDAYSGQDMADMEPHIFSVAEEAYRTMTREEKNQSIIISGESGSGKTVSAKFCMRYFA
VVGGAAQQTSVEERVLASNPIMESIGNAKTTRNDNSSRFGKYIAIGFGRKGDIIGANMRT
YLLEKSRVVFQASAERNYHIFYQLCASRELPEMRSLKLDAPEHFRYTNRGGETQIPGTDD
LSDLERTRNAFTILGVQPDQQMELFRILSAVLHLGNVNIQASGRSSDRSYIDVDDRSLAV
FSKLLGVEGPQMAHWLCHRRLAVGGEMLVKPMSGQQAVEARDALAKHIYGQLFTWTVHRL
NSALRTQRGQARSFIGVLDIYGFETFDRNSFEQFCINYANEKLQQQFNRHVFHLEQEEYV
REELAWSRIEFSDNQQCINLIEGQLGLFDLLDEECRMPKGSDESWVRKLYNQHLASKPHP
HFQKPRLSNSAFIVLHFADMVQYECDGFLDKNRDTVFEELVNILKASQSELVAELFQQQE
NPSTVANGSVRSGKRATREHKLTVGFQFRQSLQMLMDTLNSTTPHYVRCIKPNDLKEPFM
FDPKRTVQQLRACGVLETIRISAAGYPSRWTYEEFFSRYRLLLQGPQIQEQAQASCRRSL
PQLISDPDQYCFGKTKIFFRAGQVALLERLRAERLRGAAVIIQSRVRGWLSRIRYTRILW
ATVTIQRYSRGSLARRLALTLRYTKAALVIQKTCRMVVVRRLFLVIRQATVTIQAFTRGT
LARRRYRLLVAERAAVLLQAGVRGWLARQAYRRVRAAVVFMQCCVRRRAARRELLKLKTE
ARSVERYRELNKGMEVKLMQLQLRADQEARESAALRETLHAASAELGALRVTVQRLESQK
HEKPQLCPAVSEKEVEKRRRAEDKAAQEILQLTQELQALQTEKNSLCKERADLSTRFLEQ
EKAEEERVHQAVSQASAALRLELDEERRKYQGLLREFTRLEQRYDNLREMSLLTERTPGH
RRTDSTQSLSLEPLSPSATPLSPQSLTPLSLSPFPSAFPSPEELRRVSVTSPCLERRVSV
RSSDTPMDQLMEKMDVAKDPAVKMRGEDLAHAYDAVRLANKLLESQLRNQRDQWEEELEA
LRCQLSQAVSGCSSAAQRQELQELLEAREQECVKLRRELKELRNTVSLRRLLTQALTPET
LSSPSRPKPAAACAGLLECRKRDETKLIKNLVTDIRVDSALSLPPGLPASVLFLCVRQAD
CSGDQTRARSLCSAAVTAMKAALKKRSNDVDMTALWLKNACVLHDLLTRHSPKQTLDSHE
LVPLTTDLNDLIRALSDLCIQAYQQLLSITETRLQNIIVPALLESETIPGLSGSAAKLGT
SKKRAGSDPRTAAGDAPSMASVLRELGTLHTALSHQALPPTLMEQAFHQLTYLISASALN
SLLLRKDVCCWSRGMQIRYNVSLLEEWLRSRGLQAGGAVATLEPLIQAVQLLQAGKKTEA
DAQALVQTCTALSSQQIVKILTLYTPNSDLDERVTLNFIRTVQGLLKGRSDGQPPQLLMD
VRRVFPVTFPYLPPAVLHADQFVIPDSLKISFLRRA
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atggcaacactggagctttacagcaagggagcaagtgtgtggatttctgacccaaatgca
gtctgggtttcagcccaactcctccaggactacagtcctggagagaaacatctactgcta
gagctctctaatggaaaggaggttcattacccagtgggctctccttctgatctcccaccg
ctggggaaccctgacatcctggagggggaaaacgatctaacagctctcagcttcctccat
gagcctgctgtcctgcacaacctccgggtccggttcctggactacagcagcatctacact
tactgtggtattgttttggtggccatcaatccctacgaccagctccccatatatggagag
gaggtgatagatgcgtacagtggtcaggacatggccgacatggaacctcacatcttttca
gtggcagaggaagcctaccgcactatgaccagggaggagaaaaaccagtctatcatcatc
agtggggagtctggctcggggaaaactgtctcagccaaattctgcatgcgatactttgct
gtggttggaggagcagcacagcagaccagcgtggaggagagagtcctggcttctaaccct
atcatggagtctattgggaatgctaaaaccactcgaaatgacaacagcagtcgttttggg
aaatacatcgcgattggctttggtagaaagggggacatcattggggcaaacatgaggact
tatctgttggagaagtcacgggtcgtcttccaggcatcagcagagaggaactaccatatc
ttctaccagctgtgtgcctccagagagctgcctgaaatgagatccctcaaactggatgca
cctgagcatttccgctacaccaaccggggaggagagacgcagatacctggtactgatgat
ttgtcagacctggagcgcactcgcaatgcttttaccattctgggtgtgcagcctgaccaa
cagatggagctcttcaggattctttcagctgttctacacctgggaaatgtcaacatccaa
gccagtggaagaagttcggataggagttatattgatgtagacgaccgctctctggctgtc
ttctccaagctactcggagttgaagggcctcagatggcccactggctgtgtcatcgcagg
ctggctgtcgggggggagatgctggtcaaacccatgtctggtcagcaggctgtagaagcc
agagatgcgctggctaaacacatctacggccagctgtttacatggactgtccacaggctc
aactctgccctgcgcacccagaggggacaggccagatccttcataggggtgctagatatc
tatgggtttgagacctttgatcggaacagttttgagcagttctgtataaattatgcaaat
gaaaaactccagcagcagtttaacaggcatgtgttccacttggagcaggaggagtatgtc
cgggaggagctggcctggagcaggattgagttcagtgacaatcagcagtgcatcaatctc
atagaggggcaactaggcctgtttgatctgttagatgaggagtgcaggatgcctaaaggc
tcagatgagagctgggtgcggaagctgtacaaccaacacctggccagcaagccccaccct
cacttccagaaacctcgcttgtccaacagcgccttcatcgttctgcactttgccgacatg
gtgcaatatgaatgtgatggctttttggacaagaatcgagatacagtctttgaggagctt
gttaacattctgaaagcaagtcagtctgagctggtggctgagttgttccagcagcaggag
aatccgtccactgtggccaatggaagtgttcgctcagggaaaagagccaccagagaacac
aaactgaccgtgggcttccagttccgtcagtccctacagatgctaatggacaccctcaac
agcaccactcctcactacgtccgctgcattaaacccaacgacctcaaagagccttttatg
tttgaccccaagaggacagtccaacagctgagagcctgtggggtgctggagactattcgt
atcagtgctgcaggttatccatccagatggacgtatgaggagttcttcagcaggtaccgt
cttcttcttcaagggcctcagattcaggagcaggcccaggcctcgtgcagacggagtctg
cctcagctcatctcagacccggaccagtactgctttggaaagaccaaaatatttttccgg
gccgggcaggtggctcttctggagaggctgagagcagagaggctgcgtggggctgctgtg
atcatccagagccgggtcagaggatggctgtcacggatcagatacaccaggatcctctgg
gcaacagtcaccatacaaagatactccagaggatctctggccagacgactggccctgacc
ctgcgctacaccaaggctgccttagtgatccagaagacctgccgtatggtggtggtcaga
cggttgttcctcgtgatccgccaggccaccgtcaccatccaggccttcaccaggggcaca
ctggcacgccgcagatacagactgttggtagcagagcgtgctgctgtgttgctccaggcg
ggagtgcgtgggtggttggcgaggcaggcgtacaggagagtacgcgcggcggtggtgttc
atgcagtgctgcgtccgccgcagggctgccaggagagagctgctgaaactaaagaccgag
gcccgctcagtggagaggtacagagagctcaacaagggcatggaagtcaaactgatgcag
ctgcagttaagagctgaccaggaggcccgagagagcgctgctttgagggagactctgcat
gccgccagtgctgagctgggggctctgagggtgacggtacagagactggagagccagaaa
catgagaaacctcagctctgtccagccgtcagtgagaaggaggtggagaaaaggaggaga
gctgaggacaaagctgcccaggagatccttcaactcacacaagagttgcaagccctgcag
acagaaaagaacagtttatgcaaagagagagcggatctctctactcgcttcctcgaacag
gaaaaagcagaggaagagcgcgtgcatcaggctgtgtctcaggcgagtgcggctctgagg
ctggagctggatgaagagaggagaaagtaccagggtctcctcagagagttcaccagactg
gagcagcgatacgacaacctcagagagatgagtctgctcaccgagcgcacaccgggccac
agaaggaccgactccacccagagtctgagcttggagcccctctctccctcagccacccca
ctgtcaccccagtctctcaccccactctccctgtcacccttcccatctgccttcccttcc
ccggaggagctccgcagggtcagcgtgacgtctccttgcctggagaggagagtctcagtg
cggagctcagacacaccaatggaccagctgatggagaagatggatgtggccaaagatcca
gcagtgaagatgagaggagaggacctggcacacgcctacgatgctgtacgattggccaac
aagcttctggagagtcagctgcgaaaccagcgggatcagtgggaggaggagctggaagct
ctgcggtgccagctcagtcaggcagtctctggttgttcctctgctgcacagcgacaggaa
ctgcaggaactactggaggccagagagcaagagtgtgtcaaactgaggagagagctgaag
gagcttagaaacacagtgtcactcagacgactcctcactcaagctttgaccccagagacc
ttgtcctcaccgtcccgaccaaagcctgcagcagcatgcgctggtttgttggaatgcagg
aagagagacgaaactaagctcatcaagaacctcgtcacagacatccgtgttgacagtgcc
ttgtctctgccccctggtctacctgccagcgtgcttttcctgtgtgtccgccaggccgac
tgcagcggggaccaaactcgtgctcgctcgctctgtagcgctgccgtcactgctatgaag
gccgctctgaagaaacgtagcaacgatgtagatatgacagctctgtggctgaaaaacgct
tgtgtgttgcatgacctgttgacccggcactccccaaaacagacccttgattcacatgaa
ctcgttccactgacgacagacctgaacgacctgattcgcgccctgagtgacctctgtatc
caggcctatcagcagctcctctccatcactgagacacgcctgcaaaacatcatagtcccc
gccctgttggagtccgagaccatccccggtctgtctggctcagcagcgaagttggggacg
tccaagaagcgagcaggctcagaccccaggactgcagcaggtgacgctccctcgatggcg
tcggtgctgagggagctgggaacccttcacactgccctgtcccatcaggctctgcccccg
acgctgatggaacaggccttccaccagctcacctacctcatctctgcctccgctctgaac
agcctgctgctgcggaaagacgtgtgctgctggagtcgtggcatgcagatacgctacaat
gtgagtctgttggaggagtggctgcgtagccgaggtctgcaggcagggggcgccgtggcc
acactggagcccctcatccaggcagttcagcttctgcaggcggggaaaaaaactgaggcg
gatgcacaggccctcgttcagacctgcactgcactgtccagccagcagattgtgaagatt
ctgaccctctacacacccaacagtgaccttgatgaaagagtcacgctgaatttcatccgc
actgtccaggggcttctcaaaggccgttctgacggtcagcctccacagctcctaatggat
gtgaggcgagtctttcctgtcacattcccctacttgcctcccgctgtcctccatgccgac
cagtttgtcatcccagactccctcaagatctcctttctacgcagagcctag
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integrated database retrieval system
