Xiphias gladius (swordfish): 120790797
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Entry
120790797 CDS
T07311
Name
(RefSeq) transcription initiation factor TFIID subunit 4B-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120790797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xgl03021
]
120790797
03036 Chromosome and associated proteins [BR:
xgl03036
]
120790797
Transcription machinery [BR:
xgl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120790797
Coactivators
SAGA/TFTC/STAGA complex
120790797
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
120790797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
120790797
NCBI-ProteinID:
XP_039984592
LinkDB
All DBs
Position
LG6:30621846..30645930
Genome browser
AA seq
775 aa
AA seq
DB search
RCICAITCWETTPKPDLLSRSALPSHGATHLSAGNTAGRLGVQAARSSHVATNKPPKEII
MATNKLFIEALKLKSCWAAGDGDSSVQVERLKVPAKYGPITAVQPPLTAEAVSKGDSVSG
PPKVIPAGRGHQPTSSAVTAAVPGPQTSSPSVMVVAKVATSGAGSANGQLQVTKSALSQV
ASMKKAATPGRTVVITVPRTVSPVAGAPQLPLTAPSQLPANIQIPPGMMLIRSDSGQLML
VSQQALAQAQQGPRVASGQAPRILAHQVSAGVGSKCNEKVTVIRMVAPPSFQPAPVQKTA
VVKVIGASSKSTVVQTLGAITEQSSQPRIQAAVTETEKEPPTTFSQEILESVKKCKNFLV
TLIKLASSDSRSTNMANNVRGLVRSLLEGKLEAEEFTEQLYHELKSTPQPCLVPFLKKSL
PAVRHLTADPQVFIQQASVSVRNPNTLSSTMKQFITDTGQNLKTSQQVIEQPRGVILRPG
LTTLVQSRNYVSKSSRPNPKQTVVQSGKHFTGTFQMKPPFTQDPPCSTKFPFKGCSGSYK
EDDDINDVAFMAGVNLIEENAQILTTMVGSVVQSCHDQPFLSPNPVLSRILHTGHALGVT
DVGPEVVALVSHATQECLRGLLERLTVIAEHRKATLKEDLWYAKVSDVRSQLRFLEEVES
LNKKRKDEEERERLLRLARSRSHTEDPLHQQLKQRAKELQQTEEAQVQQREANLTALAAI
GPRRKRSLEQTESQVSLLSRLGVHRVTRLMLRDLLVCMEQDHFLRHSLTLYKAML
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
aggtgcatttgcgccatcacctgttgggaaactactcctaaacctgatcttttaagtcga
agtgcgctaccatcgcacggtgcaacccatctgtctgccggaaacacagcaggccggctg
ggagttcaggcagcacgctcctctcacgttgccacaaacaaacctccaaaagaaataatt
atggccacaaataagctgtttatagaagccctaaagctgaagtcctgttgggcagcaggg
gatggagattcctctgttcaagtcgagagattaaaggtcccagccaaatatggacccatc
actgctgtgcagccaccactcactgctgaagctgtctcaaagggtgactctgtctctggc
ccacctaaagtcatcccagctggccggggccaccaaccaacatcctctgcagttacagct
gcagttccagggcctcagacgtcttctccatctgtcatggtggtagcaaaggtggcgacc
tcgggagcagggagtgctaatggtcagctacaggtaacaaaatcagctctgagccaggta
gcctccatgaagaaggcagcaaccccggggaggactgtggtgataactgtacccaggaca
gtatctccagttgctggggcccctcaactgccactgactgctccctcacaactcccagcc
aatatccagataccaccaggtatgatgttgatccgcagtgacagtggacagctgatgctt
gtatcccagcaggctttggcacaggctcagcagggaccaagagttgccagtggtcaagca
cccagaattctggcccatcaggtgtctgcaggagttggaagtaaatgtaatgagaaggtg
acagtgatcaggatggtggcccctcccagtttccagccagcaccagtccagaagacagct
gtggtaaaggttattggtgcatcttccaaatcaactgtagtccagaccctgggtgctata
actgagcagagcagccagcctcgcattcaggcggctgtcacagaaaccgaaaaggagcct
ccaaccacattcagtcaggagatcctggaaagtgtgaaaaagtgcaagaacttcctggta
actctgatcaagctggcctctagtgactccaggtctaccaacatggctaacaacgtcagg
ggactggtcaggagtctgctggaagggaagctagaagcagaggagtttacagagcagctc
tatcatgagttaaagtcgactccacagccgtgcttggtgcctttcctcaagaaaagtctt
cctgcagtgcgtcaccttactgcagacccccaggtatttattcagcaggcttcagtttct
gtccgcaaccccaataccctgtcttccaccatgaagcaatttatcactgacacaggacaa
aacctcaagaccagccagcaggttattgagcagccccgaggagtgattctgagacctggg
ttgactacattagtccagtccaggaattacgtatctaaaagcagcagacccaatcccaag
caaacagtggtccagtcaggaaaacacttcacaggaacttttcaaatgaagccgcctttc
actcaggatccaccttgttcaaccaaatttccattcaagggctgttcaggatcttacaaa
gaagatgatgacattaatgatgtagccttcatggctggagtcaacctgatagaggagaat
gcacagatcctgaccaccatggttggctctgtggtgcagtcatgccacgatcagcccttc
ctctcacctaacccagtgctcagccgaatccttcatacagggcatgcactgggagtaact
gatgttggtccagaggtggttgctctggtttctcatgctactcaggagtgtctccgtgga
ctactggaaaggctcactgtgatcgcagaacaccgcaaggcaaccctgaaggaggacctg
tggtatgccaaagttagtgatgtacgctctcagcttcgcttcctggaggaagtggagagt
ttgaacaaaaagaggaaagatgaagaggagagagagagactgctgcgtttggccaggagt
cgctcacacactgaggatccactgcatcagcagctcaagcaaagagccaaagagttacaa
caaacagaagaagctcaggtgcagcaaagagaggccaacctcaccgccctggctgccatt
gggcctcgcaggaagagatctctggagcagactgaaagccaggtgtcgctgctgtccaga
ctgggtgttcacagagtgactcggctgatgctgagggatttgctggtgtgtatggagcag
gaccacttcctacgccattcccttactctgtacaaagcaatgctctga
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