Xiphias gladius (swordfish): 120790824
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Entry
120790824 CDS
T07311
Symbol
ushbp1
Name
(RefSeq) colorectal mutant cancer protein
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xgl03037
]
120790824 (ushbp1)
Cilium and associated proteins [BR:
xgl03037
]
Primary cilia and associated proteins
USH complex and associated proteins
120790824 (ushbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
Fez1
ANIS5_cation-bd
Polo_box_2
HEAT_HEATR1
Motif
Other DBs
NCBI-GeneID:
120790824
NCBI-ProteinID:
XP_039984643
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All DBs
Position
LG6:complement(9771632..9782531)
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AA seq
701 aa
AA seq
DB search
MEDSSLVRCDSLDAGSGFDREMFDHMAFDPEGSDLTVNLEPSPAELAQCEAEVGTLLSII
AELSKKMGSLKAPSEPGDLRPPRPSRPLVPDLLSHRLVRSSPERDTPSPSTSKPPLTDRV
GGGVVWTKLQEVLSSVEDSISCRRTWAAPITASDQDKHNEHLRAAQESCVKATQILEEME
REFGISCPSAFPKDQYQGDILDLEKHDSALRSTLHSRQEELERAQNTISQMEEEKNKLVG
LHKAWRSGSRSPSYRPAAGTLSPDLASPPFPGSPLLHRRTARGVTPLSAGGDGSPLGSVN
SGSPCPSPIGLESETERLNRYIERLKARNARLTAALERRKGESEQISITVNRLESDCSAL
QMALKYCEECEEAYSELLSLYEAKKQQSIPLQPDSAEAAGDRQQPDSPSSLLRSRGTEEL
STSFSTAGVTEEKETQSFTGQRSPELVNREAVLRQQIECLKRDRAAISLPKPSQGAESKL
SPETGHPAGSRGGHVTKDNVKPPDAKKEKASLFYELISVREEMSDLRALIRLKEKELRCL
EWSLMAQKAQEAAGVFVPESLREELEDRKSEQQRLCEATAKLGSDGDIAGHRTRPILKEL
QAVLQREQALKKRLALVHDSLNTALSDSASHRRDNGDQIARLTQAHSKALSSYRQIRRKY
REQVWRLEQKVAAMTESHHNQSVAPKTPGEALEWRREETVL
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggaggattccagtctggtcagatgtgacagcctggatgctgggtcaggttttgacagg
gagatgtttgaccacatggcctttgaccctgagggctctgaccttacagtaaacctcgag
ccttcaccagcagaactggctcagtgtgaggccgaagtgggcacgctgctcagcatcatc
gccgaactgagcaagaagatggggtcattaaaggcaccgagtgagcctggggacctgaga
ccaccaaggccatcgaggcctttggtccctgaccttctgtcccacagactggtcagaagc
agcccagagagagacactccctctccttccacatctaaacctccactgactgaccgagtg
ggcggtggtgtagtctggacgaaactgcaggaggttttatcatcagtggaggactccatc
agctgtagaaggacctgggccgcccccatcacagcttctgatcaggacaagcacaatgag
catctgagagcagcccaggagagctgtgttaaagccactcagatattggaggagatggaa
agagagtttgggatatcgtgtccatcggccttcccaaaggaccagtatcagggggacatc
ctggatctggagaaacatgactctgctctcagaagcaccttgcacagtcgccaggaggag
ctggagagagcacaaaacaccatcagccagatggaagaggaaaagaacaagctggtgggt
ctccataaggcctggaggtcaggcagtcgctctccttcctaccggcccgccgctgggact
cttagtccagacttggcctctcctccctttcctggttctcctttactccacagaagaaca
gccagaggtgtaacacctctgtctgctggtggagacggctctccactgggctctgttaac
tcaggcagtccttgtcccagccccataggcctggagtctgagacagaacgactgaacagg
tacatcgagcggctgaaagccagaaatgcacgtctgactgcagccttggagcgaaggaag
ggagagtcggagcagatcagtattacagtaaacaggcttgagtctgactgctctgccctg
cagatggctctcaaatactgtgaggagtgtgaagaggcctacagcgagctactgtcactt
tatgaggccaagaagcagcaaagcattcctctgcagccagactcggcagaggcagccggt
gacaggcagcagcccgacagtccatcatcgctgctcaggagcaggggaaccgaagagttg
tccacctccttctcaacagcaggggtcacagaggagaaggaaacacagagtttcacaggg
cagaggtcacctgagctggtgaatcgagaggctgttctccgtcagcaaatcgagtgcctg
aagagggaccgggcagctatttccctccctaaaccaagccaaggagcagagagcaaactg
agccctgaaactggtcacccagccgggtcaagggggggacacgtgactaaagataatgtc
aaacctcctgatgccaagaaagagaaggcttccctcttctatgaactcatctctgtcagg
gaggaaatgtcagatctgcgagctctaatccgcctcaaagagaaagagctgaggtgtctg
gagtggagtttaatggcccagaaggcccaggaagcagctggagtttttgtcccagaaagt
ctcagagaggagctggaggatcgcaagagtgaacaacagaggttgtgtgaggccacagct
aaactgggtagtgatggggacattgctggacatcgaaccaggcccattctgaaagagcta
caggccgtcctgcaaagggaacaagccctgaagaagagattagctttagtccatgactca
ttgaatacagctctctcagacagcgcctcgcacaggagggacaatggagaccagattgca
cggctcacacaagctcacagtaaagctttgagctcgtaccggcagattcgcaggaagtac
cgggagcaggtatggagactggagcagaaagtggccgccatgacggagagtcaccacaac
cagagcgtagcaccaaaaactccaggggaggccctggagtggaggagggaagagactgtt
ctctga
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