Xiphias gladius (swordfish): 120790866
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Entry
120790866 CDS
T07311
Symbol
clocka
Name
(RefSeq) circadian locomoter output cycles protein kaput
KO
K02223
circadian locomoter output cycles kaput protein [EC:
2.3.1.48
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120790866 (clocka)
03036 Chromosome and associated proteins [BR:
xgl03036
]
120790866 (clocka)
Enzymes [BR:
xgl01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
120790866 (clocka)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
120790866 (clocka)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
120790866 (clocka)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
HLH
PAS
PAS_9
bHLH_NPAS4
AIDA
Motif
Other DBs
NCBI-GeneID:
120790866
NCBI-ProteinID:
XP_039984755
LinkDB
All DBs
Position
LG6:23067239..23096518
Genome browser
AA seq
881 aa
AA seq
DB search
MTSSIDRDDSSIFDGLMEEDEKDKAKRVSRNKSEKKRRDQFNVLIKELGTMLPGNTRKMD
KSTILQKSIDFLHKHKEIAAQSESTEIRQDWKPPFLSNEEFTQLMLEALDGFFLAIMTDG
NIIYVSESVTSLLEHLPSDLVDQNLLNFLPMGEHSDVYKALSSHIMEGETLTPEYLKTKN
QLEFCCHMLRGTIDPKEPPVYEYVKFIGNFKSLNNVPNCTRNGFEGVIQRSLHSAFEDRV
CLIATVRLAKPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSG
YDYYHVDDLETLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFI
VCTHTVVSYAEVRAEQRKELGIEESPPEITADKSQDSGSESQLNTSSLKEVLERFDHSRT
PSVSSRSSRKSSHTAVSDPASSQMKLQGDRSTPGRQSVSAVEMTSQRRSSISSQSMSSQN
TGQNMTPSMVSQQQQQPQQQQQQQQPQQQQQVQNSGQSMVQFSRQLEAMQHLKEQLEQRT
RMIEANIQRQQDELRQIQEELQRVQGQSLQMFLQKGGGLNLSSVQMAQGNAVQQGGTLSM
QGQVVSAGPLQNSIQQQHAVQPQSQQQTLLREQSTALSQSQRSSLTLQPQQNPLPVSLYN
TMMIPQQSPTNVVQIATSVAQNTGPNTPAVATFAQDRTAQIRFPAGPQLLTKLVTGQMAC
GAVMVPTTMFMGQVVTAFAPQQGQTQTISISQQPQQQQQQQQQQPQQQQQPQQQQQQPQV
TAMQPGQAPLAQQQTQFLQAPRLLQGNQSTQLILQAAFPLQQQGTFTATTQQQQQQLQQQ
QQLQQQQQKQLQQQKQQLQQQQQLSAHRADSLCDRSTTQPQ
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgacctcaagcattgaccgggatgacagcagtatttttgatgggttaatggaagaagat
gaaaaagacaaagcaaaacgtgtgtcccgtaataagtctgagaagaaacgcagagaccag
ttcaatgttctcatcaaggagctgggtaccatgttgccgggcaacacccggaaaatggac
aagtccactattttgcagaagagcatcgactttctgcacaaacacaaggaaatcgctgct
cagtcagagtcaactgagatcagacaagactggaagcctccttttcttagtaatgaagag
ttcactcagctgatgttggaggcgttagatggatttttccttgcaattatgactgatggg
aatataatctatgtctctgagagcgtgacctctctactagaacatttaccttctgatctt
gttgatcagaacctgttgaacttcctgcccatgggggagcattcagatgtgtacaaggct
ctgtcctctcatatcatggagggagagacgttgacacccgaatatcttaaaacaaaaaat
cagctagagttctgttgccacatgctcagagggactatcgaccccaaagagccccctgtg
tacgaatatgtcaagttcattggaaacttcaagtccctgaataatgtgcctaactgtacc
cgaaacggtttcgaaggagtgatccagcggtcacttcactctgcctttgaagacagagtt
tgtctcatagcaactgtgaggctagccaaaccacagtttatcaaggagatgtgcactgta
gaagagcctaatgaggaattcacctccaggcatagtttagagtggaaatttctcttcttg
gaccacagagctccacctatcataggctacctcccgtttgaggtcctgggtacatcagga
tatgactactatcatgtagatgacctggagacactggccaaatgccatgaacacttaatg
caatatggcaaaggaaagtcctgctactacagattcctcacaaaagggcagcagtggatc
tggcttcagacccactactacatcacctaccaccagtggaactccagaccagagtttatt
gtctgcacacacactgttgtaagttatgctgaggtaagagcagaacagcgtaaagaactt
ggaattgaagaatcgccacctgagatcacagcagacaagtcccaggattcgggttctgag
tcccagctcaacacttccagtctgaaggaggttttagagcgcttcgaccacagccggacg
ccctcggtctcgtctcgcagctcccgcaaatcatcacacaccgctgtgtctgacccagcc
tcatcacagatgaaacttcagggagatcggagtacaccgggtcgccagtctgtctctgct
gtagagatgacatcacaacgaagatcatctatcagcagtcaatcgatgagctcccaaaat
acaggacagaacatgactccatccatggtttctcaacaacagcagcagccacagcaacag
cagcagcaacagcagcctcaacagcaacaacaagttcagaacagcggacaatcaatggtg
cagttctctagacagttagaagccatgcagcacctgaaagagcagttggagcagaggacc
aggatgattgaggccaacatccagcggcagcaggatgagctgcggcagatccaggaggag
ctgcagagggtgcagggacagagcctgcagatgttcttgcagaaaggaggaggattaaat
cttagctctgttcagatggcccaagggaacgctgtgcaacaggggggaacactcagcatg
caaggccaggtggtctctgcagggcctctacagaacagcatacagcaacaacatgctgtc
caaccccaatcccagcaacaaacactcctacgggaacagagcacagcactctcacagtct
caacggtcatctctcactctgcagcctcaacaaaatccactgcctgtgtctctctacaac
accatgatgatccctcagcaaagccctactaatgtggtccagattgccactagcgtggca
cagaatactggacctaacactcctgcagtggcaacatttgcacaggaccgaactgctcag
attaggtttcctgccggtcctcagctcctcaccaagctagtgacaggacagatggcatgt
ggggcagtcatggtccccacaaccatgtttatgggccaagtggtgacggccttcgctcct
cagcagggccagacccagacaatcagcatttcccagcagccgcagcagcaacagcagcaa
cagcagcaacagccgcagcaacagcagcagccgcagcagcagcagcagcagccacaggtc
acagccatgcagccagggcaggctccactggcccagcagcaaacacagttcctacaggct
cctcggcttcttcaaggaaaccagtccacccagttgatcctgcaggcagcgttccctttg
cagcagcaaggtaccttcactgccacaacccaacagcagcagcagcagttacaacagcaa
caacagttacaacaacaacagcagaagcagttacaacagcaaaaacagcaacttcaacag
caacagcaactatccgctcacagagcagatagtttgtgtgatcgctccactacgcagcca
cagtag
DBGET
integrated database retrieval system
