Xiphias gladius (swordfish): 120791010
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Entry
120791010 CDS
T07311
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120791010 (lingo3a)
Membrane trafficking [BR:
xgl04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
120791010 (lingo3a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_LRWD1
LRR_9
LRRNT
LRR_6
Cupin_1
V-set
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
120791010
NCBI-ProteinID:
XP_039985023
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Position
LG6:19849169..19894855
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AA seq
610 aa
AA seq
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MGVSLGQDISWLLPFLFLLLMITVSHNQSQGCPQRCECIAKLKTVSCYGKRLSALPDGIP
LDTKILDLSGNKLRWVEHGDLLLYPRLEKLDLSENMISVLEPNAFSSLQNLQSLSLRGNQ
LKLVPMGAFSRLSNLTSLDLSGNKIVILLDFTFQDLKSLKNLEVGDNDLVYISNKAFLGL
VGLRELTIERCNLTSVSSQSLSYLHNLGTLRLRYLSISALEDQNFRKLGNLRGLEIDHWP
FLEYISPHSLQGLNLSWLSITHTNITSVPTSALRSLAHLTSLNLSYNPISVLESWALRDL
VRLKELHLVNTNLVVVQPYALGGLRQIRLLNLSTNSLVTLEEGAFQSVNTLETLRLDGNP
LACDCRLLWILQRRKTLNFDGASPVCMMPVEVQGRALNAFSDSALFDHFTCQKPKIRNRK
LQQISAREGQVVSFICRAEGEPTPVIFWISPQRRRITTKSSGRLTVLPEGTLEIRYAQVT
DSGTYICIASNAGGNDTYFATLTVSGLPLDPALMANRTYYAGDLNDTNLNDTRVFLKFTL
DLKTILISTAMGCIMFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPAASGGQG
GARKFNMKMI
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgagcctgggccaggatataagctggctcctgcctttcctgttcttgctactg
atgatcacggtgtcacacaaccagagccaaggatgtccccaacgttgtgagtgcattgca
aagctcaagactgtgtcctgttatggtaaacgcctgtctgcactgccagacggcatccca
ctggacactaagatcctggatctaagtgggaataaacttcgctgggtagagcatggtgac
ctgcttctatatccacgtctggaaaagctggacctgagtgagaatatgattagtgtcctg
gaaccgaatgctttttctagtctccagaacctgcagtcgctttcactgaggggtaaccaa
ttgaagctggtccccatgggggctttctcacgtctctccaacctaacttcactggacctc
agtgggaataagattgtgattcttttggactttaccttccaagacctgaaaagtctaaaa
aacctggaggttggagacaatgatctagtttatatctccaacaaggcctttctgggttta
gtggggctgagggagctgaccattgagaggtgcaacctgacctctgtgtctagtcagtct
ttgtcttacctgcataacctggggactctgcggctccgctacctcagtatctccgcctta
gaggaccagaacttccggaagctggggaacctgagggggctcgagatagatcactggccc
tttttggagtacatttcccctcacagcctgcagggtcttaacttgtcctggctgtctatt
acgcacaccaacatcacctctgtgccgacctctgccctgcgcagtctggctcacctcacc
agcctcaacctctcctacaaccctatatctgtgttggagtcatgggccctgcgggacctt
gttaggctgaaggagctgcatctggtcaacactaacctggtagtagtgcagccatatgca
ctgggtggtctaaggcaaatccgccttcttaacctctccactaacagcctggtgacccta
gaagagggagcctttcaatctgtcaacactctggagacgctgcgattggatggaaaccct
ctggcctgtgactgccgcttgctctggatccttcagcgcaggaagaccctcaattttgat
ggcgcttccccagtgtgtatgatgcctgttgaggtgcaaggacgggctcttaacgctttc
tctgactcagctctctttgaccactttacttgccagaagcccaaaatccgcaacaggaaa
ctgcagcagatatctgcccgtgagggacaggtcgtgtcattcatttgcagggcagaaggt
gagccaacaccagtgatattctggatctctcctcagcgccgccgcatcaccacaaagagc
agtggccgcctaacggtattaccagaaggcacactggaaatacggtacgcccaggtaaca
gatagtggaacttacatctgcatagccagcaatgctggtggaaatgacacctattttgcc
acacttacagttagtgggctgccactagatccagctctcatggccaaccgtacttactat
gctggggatcttaatgacacaaatctaaatgataccagagtcttcttgaagtttactctg
gacctcaagactatccttatatccacagctatgggctgtatcatgttcctgggggtagtc
cttttctgtttcattctactgtttgtgtggagtcgagggagagggcagcacaaaaacaat
ttctcagtggaatattccttcagaaaagtggatggacccgctgctagcggaggacagggt
ggggcgcgcaagttcaacatgaaaatgatttga
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