Xiphias gladius (swordfish): 120791023
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Entry
120791023 CDS
T07311
Symbol
rnf13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13 isoform X1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120791023 (rnf13)
Enzymes [BR:
xgl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120791023 (rnf13)
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120791023 (rnf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8
Prok-RING_4
zf_RING_Vps8_fungal
DUF7027
PHDvar_NSD
Neur_chan_memb
zf-RING_16
zf-RING_4
RINGv
PHD
VPS18_RING_C
zf-RING-like
Hemotin
zf-C3H2C3
FeoB_associated
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
120791023
NCBI-ProteinID:
XP_039985047
LinkDB
All DBs
Position
LG6
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AA seq
384 aa
AA seq
DB search
MLLSLGMLMLSATQIYTIFTVQLFAFLNLLPVEADIAAYSFDNKTENFDDLPARFGYRLP
SEGLKGFLIGARPENACEPIEPPPRDNLTGAFIVLIKRFDCNFDIKVLNAQKAGYKAAIV
HNVDSNDLISMGSNDLDVMKQVDIPSVFVSEDTANSLKEDYMYDKGGHVVLMPDFSLPLE
YYLIPFLIIVGICLILIVVFMITKFVQDRHRARRSRLRKDQLKKLPIHKFKKGDNYDVCA
ICLDEYEEGDKLRVLPCSHAYHSKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDSEDGES
GPEENEEVSESTPLLRSLASTSAHSFGTMSGASRSEQDQESSEYEDDELDSSDSEEEVTV
ETVVVQMQQPFSEGHNHEQDLPRA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgcttctgtccctgggaatgctgatgctgtcggccacgcagatttacaccatcttcact
gttcagctcttcgccttcctcaacctgcttcctgtggaggccgacatcgctgcttattca
tttgacaacaaaacagagaactttgatgacctgcctgcacggtttggctatcgtctcccc
agcgaaggactgaagggcttcctgattggtgcacggccagaaaatgcgtgcgagcccatc
gagccccctccaagggacaacctgacaggcgccttcatcgtcctcatcaagcgatttgac
tgtaactttgacatcaaggtcctcaatgcccagaaagcggggtacaaagcggccattgtt
cacaatgtggactccaatgacttaatcagcatgggatccaacgatttggatgttatgaag
caggtcgatattccctctgtgtttgtgagcgaggacactgccaactctctgaaagaagac
tacatgtatgacaaggggggacatgtggtcctcatgccagacttcagcctgccgctggaa
tactacctgatccccttcctcatcatcgtgggaatctgcctcatcctcatcgttgttttt
atgattaccaagtttgtccaggatcgacacagggctcggaggagccgcctgcgcaaagat
cagctaaagaaacttccaattcacaagttcaagaaaggggacaactacgatgtatgcgcc
atctgcctggacgaatatgaagagggagacaaactccgagtcctgccatgttctcatgcc
taccacagcaagtgtgtggacccctggctcaccaaaactaagaagacatgtccggtgtgt
aagcagaaggtggtcccctcgcagggcgactccgactctgattcagaggatggggagagc
ggccctgaggagaacgaggaggtgtctgagagcaccccgcttctgcgctctctggcctcc
accagcgcccactctttcggcaccatgtcgggagcgtcgcgctcagagcaagaccaggag
tcctccgagtacgaggacgacgagctggacagcagcgacagcgaggaagaggtaaccgtg
gagactgtggtggtgcagatgcagcagcccttctctgagggccacaaccacgagcaagac
ctgccccgagcttga
DBGET
integrated database retrieval system
