Xiphias gladius (swordfish): 120791053
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Entry
120791053 CDS
T07311
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120791053 (sox2)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120791053 (sox2)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
120791053
NCBI-ProteinID:
XP_039985109
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Position
LG6:5591237..5594590
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AA seq
322 aa
AA seq
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MYNMMETELKPPAPQTNTGGTGNTNTSGTGTNQKNSPERVKRPMNAFMVWSRGQRRKMAQ
ENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMK
KDKYTLPGGLLAPGGNGMGTGVGVGVGGGLGGGVNQRMDSYAAHMNGWTNGGYGMMQDQL
SYQHPGLNAHNPSQMQSMHRYDMSALQYNTMTSSQSYMNGSPTYSMSYSQQTTPGMTALG
SMGPSSVVKSESSSSSPPVVTSSSHRAAPGCQSGDLRDMISMYLPGAEVSEQTAQTRLHM
SGHYQSTVPGTTINGTLPLTHM
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggagactgaactgaagcccccagctccccagactaacacggggggc
acgggcaacaccaacacgtccggcactggcaccaaccagaaaaacagtccggagcgggtc
aagagacccatgaacgcgttcatggtgtggtcccgaggccagaggaggaagatggcccaa
gaaaatcccaaaatgcacaactcggagataagtaagagactgggcgcggagtggaaactt
ctgtcggagagcgagaagagacctttcatcgacgaagccaagaggctgcgggccctgcac
atgaaggagcatccggattacaaataccggccccggcggaaaaccaagaccctcatgaag
aaggacaagtacaccttgcccggcgggctgctggctccgggaggaaacgggatgggaact
ggggtcggtgtaggggtgggcggcgggttgggcggcggggtgaaccagcggatggacagc
tacgcggcgcacatgaacggctggaccaacgggggctacggcatgatgcaggaccagctg
agctaccagcaccccgggctgaacgcgcacaacccgagccagatgcagtccatgcaccgc
tacgacatgagcgccctgcagtacaacaccatgaccagctcccagagctacatgaacggc
tccccgacatactccatgtcctattcccagcaaaccacgccggggatgaccgccctgggc
tccatggggccctcctcggtggtgaagtccgagtccagcagctccagcccgcccgtcgtc
acctcgtcgtcccaccgggccgccccgggctgccaaagcggagacctgagggacatgatc
agcatgtacctgcccggggcggaggtcagcgagcagaccgcccagaccaggctacacatg
tccgggcactaccagagcaccgtgcccgggacgacgatcaacggcacgctgcccttaaca
cacatgtaa
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integrated database retrieval system
