Xiphias gladius (swordfish): 120791226
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Entry
120791226 CDS
T07311
Symbol
atg4c
Name
(RefSeq) cysteine protease ATG4C
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04136
Autophagy - other
xgl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120791226 (atg4c)
04136 Autophagy - other
120791226 (atg4c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xgl01002
]
120791226 (atg4c)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120791226 (atg4c)
03029 Mitochondrial biogenesis [BR:
xgl03029
]
120791226 (atg4c)
Peptidases and inhibitors [BR:
xgl01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
120791226 (atg4c)
Membrane trafficking [BR:
xgl04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
120791226 (atg4c)
Mitochondrial biogenesis [BR:
xgl03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120791226 (atg4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
120791226
NCBI-ProteinID:
XP_039985429
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All DBs
Position
LG6:7848717..7860446
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AA seq
495 aa
AA seq
DB search
MLCGYGFHPLLVQMENKGSDEVEKLKTKFLSVWHNVKYSWALKSKTSFSRNSPVLLLGKC
YHFKAEDDDRLADACYEASDEDFIMGNVEAFRKDFASRVWLTYREDFPPLPGSTLTSDCG
WGCMLRAGQMMLAQALILHFLGRDWTWSQALTLQPLDTETWTATAAKRLVASLEASLQGS
QGPSDPGLPTMPQAQAPGSAEEADAHVKETYHRTLVSWFGDSPSALLGLHRLVRLGLTMG
KQAGDWYGPAVVAHILKKAVEEAMDPGLAGITAYVSQDCTVYSADVVDSHRAPTAGQASA
ERPDAPPPPQNSQPASAPTLPDSRAVIILIPVRLGGEKINPEYFDFAKSILSLEYCIGII
GGKPKQACYFVGFQDDSLIYMDPHYCQSFVDVSTSDFPLQSYHCPSPKKMPFSKMDPSCT
IGFYSRSSQDYERISQELSKVLQPSAKEKYPAFTFVQGRGKDYDLSVGLTPEKREWPFIR
DPRRTVTTAGDFVLL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgtgggtatgggttccatcccttgctggtccaaatggagaataaagggagcgac
gaggtggaaaaattgaagacaaagttcttgtcagtgtggcacaatgtgaagtacagttgg
gctctgaaatccaagacctcattcagcagaaattccccagtacttcttctcgggaaatgt
taccatttcaaggctgaagacgacgacaggctcgcagatgcctgctatgaagcctctgat
gaggacttcatcatggggaacgtggaggctttccggaaggactttgcgtctcgagtgtgg
ctgacctaccgggaggacttccctccgttgcccggctccaccctgacctccgactgtggc
tggggatgcatgctgagggcgggacagatgatgctggctcaggcgcttattctgcacttc
ttgggcagagattggacctggtcgcaggcactgacactccagcctttagacacagagaca
tggactgccaccgcagccaaacgtctggttgcctctctggaggcttctctgcaaggctcc
caggggccctctgatcccggattaccaaccatgcctcaagcccaggccccgggatctgcg
gaggaggcagatgcacatgtgaaagagacgtaccaccgcacactggtgtcctggtttggg
gacagcccctcggctctgttgggcctccacaggctggtccgcttaggcctgacaatgggg
aaacaggcaggggactggtatggacctgctgtggtggcgcacatcctcaagaaagctgtc
gaggaggcgatggaccctggcttggcgggtataactgcctatgtctcccaggactgcaca
gtgtacagcgctgatgttgtcgatagccacagggcaccaacagcagggcaggcctccgct
gagagaccagatgcccctcctccgccacagaacagccaaccagcgtctgcccccaccctg
ccagacagccgagccgtcatcatcctcatccctgtgaggctgggaggggagaagataaac
cctgagtattttgactttgcaaagagcatactgagtctggagtactgcataggcatcatc
ggagggaagcccaaacaggcctgctactttgtaggatttcaagatgacagcttgatttac
atggaccctcattactgtcagtcttttgtggatgtcagcaccagcgatttccctctccag
tcatatcattgcccctcaccaaagaagatgcctttcagcaagatggacccaagttgcacc
ataggtttctactctaggagtagccaagactatgagagaatcagccaagagctgtctaag
gtgctgcagccatcagcgaaggagaaatacccagcgttcactttcgtgcaaggccgtggc
aaagattacgacctgtcggtgggcctgaccccagagaagagggaatggcccttcatccgt
gacccaaggaggacggtcaccactgctggggactttgtgctgctttga
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