Xiphias gladius (swordfish): 120791252
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Entry
120791252 CDS
T07311
Symbol
sned1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 isoform X1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xgl04990
]
120791252 (sned1)
Domain-containing proteins not elsewhere classified [BR:
xgl04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
120791252 (sned1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_CA
EGF_2
EGF_3
cEGF
EGF_MSP1_1
EGF_DL_JAG
SdrD_B
YoaL
Motif
Other DBs
NCBI-GeneID:
120791252
NCBI-ProteinID:
XP_039985483
LinkDB
All DBs
Position
LG6:complement(25495644..25520138)
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AA seq
1397 aa
AA seq
DB search
MVLVLRALLPCLCTLLSLDLLPGVEPTVPLEDFYPFGKDKGDSQTIAQDDGGSGLVEISV
AFPFFGDRHTGLYVNNNGLVSFLREVSQFTPVAFPIAGDRRVVAPFWADVDNRRAGRVFY
RESREPSILSRASGDVRTYFSEFPNFNATWVLISTWHQVTFFGGNSLTPVNTFQVVLITD
GELSFTLFQYNNITWTTGMHASSGGNLAGLGGIAAQAGFNAGDGKRYFNIPGSRTADVEN
VEGTTNVGYPGRWVFRIDNAHVEVGGCNNSASVCPHLRPCLNGGQCIDDCITGNPSFTCS
CLAGFTGRRCQIDVDECASYPCQNGGTCKDQINSFICQCPPGYTGILCETDIDECKDRPC
LNNALCVQGAGSFTCVCEPGYTGILCETDLNECESQPCLNGGECIDQVANFTCICPATFT
GMLCETELVMLQVNSTEAENQTALCEEEDCKRHQICEYASSGTYNCTCAPGFYGDKCEEE
CLCQNGGVCVDINGTCECPSGYTGLYCQFEVTQTPCSNSRPCPDGGPCLEYGGTYLCTCQ
TSGAELDQKDFYPYVQPRSVCDSSPCLNGGYCYERDGGYTCECKYGYWGKHCEKVRLNTC
ASGPCRNGGSCKEEAGSYRCVCPYRFTGKHCEVGKPDPCASSPCLNGGTCFHYIGKYKCE
CTEAFNGRHCEISRSSVQTSAELSCGAPPQVKHAEVQFSSTTPGSMAVYTCHSGFMSVPR
ATQSICGIQGDWSQPPICEELNECLSQPCLNGGTCQNQVGSYQCECNDGFSGHRCQTDLN
ECLSEPCKHGGTCEDQPGSYLCHCPQGFEGQNCEIEQDACESNPCLNGGVCRGYRRHYVC
MCKGGFFGDQCQMLEDPCVLQLCGNRGICTTDWRGNYNCICKTGHTGKDCEKDLLPPSGL
NVLRVEENEVELRWDEPEPSQSLISGFAVTYAPLGRRDPKTDYLDRQQSTHVMRGLEPGL
LYNISTYSIKRSNNRKDSSQPATALIRTRPRRVEQLQVVNVSSSQVWLSWLVQAARHAAV
SRVHVSLLPSDGSEAHTAVLNTSTTEYTFSALLPGRMYTADVLTQSGIRPDEFPSTSHSA
GPLKFWTRPLPPQNLSLSHVTTNSALITWSRHPRNVPDGFVVNVTRGLNTRSRFLPNGKL
GSYTLRELTPGQHYYVALTSVKNTGQEQIHSIPQHLAFTTLPMEARSSRRERPTATGQGT
QVGRTPPPSQPRELRGTAETENSEELPRYTELIDRRGKITAKFTHLPRKAIRHRNKPDPP
IRLEKMEETTNKISLALEIQGEGLRTKHELPQDCRSLPCQNGGTCVNGGGSFICDCAVGF
KGRQCELLCQRVPHPCTRLYSETKSVPVWEGGVCHYLYKRTYKVQQDVCYREICEPTLPK
KSQKHLDADERIVITVM
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atggtgttggtgctgcgagccctgctgccctgcctctgcaccctgctctccctggacctg
ctgcctggggtggaacccactgtgcccctggaggacttctatccctttggcaaggacaag
ggggactcccagaccatcgctcaggacgacggaggttccgggctcgtggagatctctgtt
gcgttccccttctttggagacaggcacacaggactctatgttaacaacaatggccttgta
tctttcctgagagaggtgtctcaattcacacccgtagcttttccaatcgctggggacagg
agggttgtagcaccattctgggctgatgtagacaaccgaagggcagggagagtcttctac
agagagagccgggagccttccatcctgagtagggcctcgggtgatgtcaggacgtacttt
tcagagttccccaacttcaacgcaacatgggtccttatctcgacatggcaccaagttact
ttctttggaggcaactccctcacaccggtaaatactttccaagtggtgctcattacagat
ggagagctttccttcactttattccagtacaataatatcacttggaccacaggcatgcat
gccagcagtggaggaaacctggctgggctaggagggatcgcagcgcaggcaggtttcaat
gctggggacggcaagcgctatttcaacatccccggctctcgcacggctgatgtggagaat
gttgagggaaccaccaacgtgggctacccaggcagatgggtcttccgtatagacaatgca
catgtggaagtgggtggctgcaataactccgcatcagtgtgcccacacctgcgaccatgt
ctgaatggaggccagtgcatcgacgactgtattacaggcaacccctccttcacttgctcc
tgcttggctggcttcactggtcgacgatgccagatcgatgtcgatgaatgtgcctcatat
ccttgccagaatggagggacttgtaaagaccagattaacagtttcatctgtcagtgtcct
cctggatacactgggattctgtgtgaaacagacattgacgagtgcaaagacagaccatgc
ctcaacaacgcgttgtgtgtacaaggcgctggcagtttcacctgtgtgtgtgaaccaggt
tacactgggatcctgtgtgagacagacttaaacgaatgtgagtcgcagccctgtctgaat
ggaggagagtgcatcgatcaggtggccaacttcacctgcatttgtcccgctaccttcact
ggaatgctctgtgagacagaattggtgatgcttcaggttaattcaactgaggcagaaaac
caaacagccttgtgtgaagaggaagattgcaagaggcaccagatttgtgaatacgccagc
tccggaacttacaactgtacatgcgctccaggcttctatggtgacaagtgtgaagaggaa
tgtctttgccagaatgggggtgtctgtgtggacatcaatgggacttgtgaatgcccttca
ggctacacaggactctactgtcagtttgaagtaacccagacaccttgcagtaacagcagg
ccgtgtcctgatggaggtccttgtttggagtatgggggaacctacctgtgtacatgtcag
actagtggagcagaactagatcagaaggacttctacccctatgtacagccccgatcggtc
tgcgactcctctccgtgtctgaatgggggctactgctacgagcgggatggaggctatacc
tgcgaatgcaaatacggatactgggggaagcactgtgagaaagttagactcaatacctgt
gcttctggtccctgccgcaatggaggctcctgtaaggaagaggcagggagctacagatgt
gtgtgtccttacagattcactggaaaacactgtgaagtcgggaaaccagacccctgtgcc
tctagcccctgtctaaatggggggacatgttttcactacataggaaagtataaatgtgaa
tgcactgaggccttcaacggcagacactgtgaaataagcaggagctcagtacaaacttct
gcagaattgagctgcggggcgcccccacaagtgaagcacgctgaagtccagttctcctca
acaacaccgggctccatggctgtgtatacatgccactccggcttcatgtccgtgcccaga
gccacccagagcatctgtggtattcagggagactggagccagccgcccatttgtgaggag
ctcaatgagtgcctatcacagccttgccttaatggaggtacatgtcaaaaccaggttgga
tcctaccagtgtgagtgtaatgatggcttcagcggacatcgctgtcaaacagacctgaat
gaatgcctgtcggaaccctgcaagcacggggggacatgtgaggaccagcctggctcctac
ttgtgccactgtccacaaggcttcgaaggccagaactgtgaaatagagcaggacgcgtgc
gaatccaacccctgtctaaatggaggtgtgtgtcggggttacagaaggcattatgtgtgc
atgtgcaaaggtggtttttttggggaccagtgccagatgttggaagacccatgtgtactg
cagctttgtggaaaccgtggcatctgcacgactgactggagaggaaactacaactgtatc
tgcaaaacaggacacacgggcaaagactgtgagaaagacctgttgcctccctctggtctc
aatgtgctgcgtgtggaggagaacgaggtggagctgcgctgggatgagccggagccctca
cagagcctgatcagtgggttcgctgtcacctatgctcccctgggccggagggatcccaaa
acagattacttggacaggcagcagtccacccacgttatgcgaggcctggagcccggcctg
ctgtacaacatctccacctactccatcaaacgcagcaacaacaggaaagactccagccag
cctgccaccgcactaatacgcaccagacctcggcgggtggagcagctgcaggtggtcaat
gtgtcctcatctcaggtttggctgagctggctggttcaggcagctcgtcatgcagcagtc
agcagggtgcacgtgtctttattgccctcagatgggagtgaggctcacactgcagtgctc
aacaccagcaccacggagtacaccttcagtgcactacttcctggtcggatgtacacagct
gatgtgctgactcaaagtggaatcagaccagatgagtttccctccaccagccactcagct
ggaccattgaaattctggacaaggcctctccccccacagaacctctctctgtcacatgtg
accactaactcagcactgatcacctggagccgccacccgagaaacgtcccagatggcttt
gtggtcaacgtgacccgagggttgaataccaggagtcgcttcctgcccaatgggaagtta
ggatcatacaccctccgcgagctgacgccaggacagcactactatgtggctctcacatcc
gttaaaaacacagggcaggaacagatccacagcatacctcagcacttagccttcactacc
ttgccgatggaagccagatcatcaagaagagagaggccaacagcgactggacaggggact
caggttggacgcacacctcccccatctcagcctcgggagctgagaggcacagcagaaaca
gagaactcagaagaattgcccagatacacagaactcattgacaggaggggaaagataaca
gcgaagttcactcacttacctcgaaaagccattcgacatcgtaacaaacctgacccacca
attagattagagaagatggaagaaacaacaaacaaaatcagccttgcactagagattcaa
ggagaaggtttaagaacaaagcacgagttgccccaggactgccgcagtctgccctgccag
aatgggggtacatgcgtgaacggagggggctccttcatctgcgactgtgcagtggggttc
aagggcaggcagtgtgaactgttgtgccagcgagtgccacacccgtgcacccgtctctac
tcggaaacgaagagtgtgcctgtctgggagggcggagtgtgtcactacctgtacaaaagg
acatataaagtgcagcaggatgtctgttatcgagagatttgtgaaccaacgcttccaaag
aaaagtcagaagcacttggatgctgatgaaaggattgtcatcactgtcatgtga
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