Xiphias gladius (swordfish): 120791302
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Entry
120791302 CDS
T07311
Symbol
mbd3b
Name
(RefSeq) methyl-CpG-binding domain protein 3b isoform X1
KO
K11591
methyl-CpG-binding domain protein 3
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120791302 (mbd3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xgl03036
]
120791302 (mbd3b)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
120791302 (mbd3b)
Chromatin remodeling factors
NuRD complex
120791302 (mbd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD_C
MBDa
MBD
DUF7028
Clr2_transil
Pardaxin
Motif
Other DBs
NCBI-GeneID:
120791302
NCBI-ProteinID:
XP_039985595
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Position
LG6:20087647..20094231
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AA seq
274 aa
AA seq
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MEKKRWDCTALPKGWKMEEVTRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNQMDLS
SFDFRTGKMLMSKLNKNRQRLRYDNNNQNKGKPDLNTSLPVRQTASIFKQPVTKVTNHPN
NKVKTDPQKAVDQPRQLFWEKKLSGLNAYDIAEELVKTMELPKGLQGVGPGCTDKTLLSA
IASALHTSAAPITGQLSAAVEKNPGVWLNTAQPLCKAFIVTDEDIRKQEELVYSVRKRLE
EALMADMLAHVEEAASEGEALKEEGNGSEDMESV
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaaaggtgggattgcactgctctccccaagggctggaaaatggaagaagtg
accagaaagtcgggtttgtccgctggaaaaagcgatgtctattattttagtccgtctggg
aagaagtttcggagcaagcctcagctggcccgttaccttggtaaccagatggacctcagc
tcctttgacttccgcacggggaagatgctgatgagcaagctgaacaagaaccgtcagaga
ctgcgatacgataacaacaaccagaacaagggcaaacccgacttgaacacatcactccca
gtcaggcaaacggcctcaatctttaagcagcccgttaccaaggttaccaaccatcccaac
aacaaagtgaagacggatcctcagaaagccgttgaccagcccagacagcttttttgggag
aagaaactcagtggtcttaatgcttatgacattgcagaggagctggtgaaaacaatggaa
ctgcctaaaggcctgcaaggcgttggtccaggctgcacagacaagactctcttgtcggct
attgcaagcgctctccacaccagcgccgctcctataactggccagctgtctgcagctgtg
gagaagaacccgggtgtgtggctcaacacagcgcagccactgtgcaaggcttttatagtc
actgatgaggacatcaggaaacaggaggagctggtgtacagtgtgaggaaaaggctggag
gaggcactgatggctgatatgttggcccatgtggaagaggctgccagtgaaggcgaggct
ctgaaggaggagggcaacggcagtgaagacatggagagtgtatag
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