Xiphias gladius (swordfish): 120791352
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Entry
120791352 CDS
T07311
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120791352 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xgl03400
]
120791352 (rad54l)
DNA repair and recombination proteins [BR:
xgl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
120791352 (rad54l)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
Motif
Other DBs
NCBI-GeneID:
120791352
NCBI-ProteinID:
XP_039985688
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Position
LG6:complement(29799310..29814428)
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AA seq
740 aa
AA seq
DB search
MRRSLAPSQVAKRKQAGNSCEDEDWTRRTEKRRKSDNEIRENHISPFRKPLTQFNNRPAC
MDGDKHEAFIRSILSKPFKIPIPNYTGLLGIRALGLKRAGIRKALHDPFAEDALVLYEPP
TLSAHDLIKADKEKLPVHVVVDPVLGKVLRPHQREGVKFLWECVTGRRISGSYGCIMADE
MGLGKTLQCIALMWTLLRQSPDTKPEIDKAIVVSPSSLVRNWYNEVGKWLGGRVTPVAID
GGSKDEIDRRLVNFISQHGLRVPTPILIISYETFRLHAEVLHKGKVGLVICDEGHRLKNS
DNQTYQALNAMSAHRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFELPILRG
RDADASDKDRQTGEEKLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELY
KRFLRQAKPVETVQEGKISVSSLSSITSLKKLCNHPALIYEKCVTGEEGFEGALDLFPPG
YCSKAVEPQLSGKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCRSRRYLYVRLD
GTMSIKKRAKIVERFNSPSNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAM
ARVWRDGQKKTCYVYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGELREL
FILNEETTSDTHDKFRCHRCVNGREVRPPADDSDCTSDLSQWNHSFDKKGLMDQVLKASW
DAAVSFVFHQRSHEDQKGAV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggagtcttgcccccagtcaggtcgctaaacggaagcaagcaggtaactcctgc
gaggatgaagactggacacgtagaactgagaaaagaagaaaaagtgataatgagataaga
gagaaccatatttctcccttcagaaagcctctgacacagttcaacaacaggcctgcatgt
atggatggtgacaaacatgaggcatttattcgaagcatcctctccaagccatttaaaatt
cctattccaaattacacaggcttgctgggaatcagggcacttggtctaaagcgtgcagga
ataaggaaagcacttcatgatccctttgcagaagatgctttggttctttatgagcccccg
actctgagcgctcatgacctgattaaagccgacaaagaaaaactaccagtccatgttgtt
gtggatccagttttaggaaaggtgctcagacctcaccagagagagggggtgaagttcctg
tgggagtgtgtgacgggcagacgcatctcaggatcatacggctgcatcatggctgatgag
atgggcctggggaagactttgcagtgtatcgccctcatgtggaccctactacgccaaagc
cctgacaccaagccagaaatagacaaggccattgtggtttcaccttctagtctagttcgc
aactggtacaatgaagtgggaaagtggctgggaggacgcgtcacgccagtggccatcgac
ggaggttcgaaggatgagatcgatagacggctagtgaacttcatctctcagcatggtttg
agagtacccaccccaatccttatcatttcatatgagacatttcgattgcatgctgaggtt
ctgcacaagggcaaagttggacttgtcatctgtgatgagggccatcggctgaagaactct
gacaaccagacgtaccaggccctaaatgccatgagtgcccacaggagagtgctgatatca
ggcactccgatccagaatgacctgttggagtacttcagcctggtccactttgttaatgct
gggatcctcggtacagcccaggagtttaaaaagcgatttgagcttcccatcctcaggggt
cgagatgcagatgccagtgataaagacagacagactggagaggagaaactcaaggagctg
atcagcatcgtcaacaggtgtttgataaggagaacttctgatatcttgtccaagtatctt
cctgtgaaaattgagcaggttgtgtgttgcaggctgactcctctgcagacagagctctat
aagcgcttcctgaggcaggccaaacccgttgagaccgtacaggagggcaaaataagtgtc
tcctctctgtcatccatcacatcactcaagaaactgtgcaatcacccagcgctcatctat
gagaagtgtgtgacgggcgaggagggctttgagggggcgctggatctgtttccacctggc
tactgcagtaaagctgtggagcctcagctctctgggaaaatgctggttcttgattacatt
ctggcaatgacaaggacaacaactagtgacaaagtggtgctcgtctccaactacactcaa
acattggacctctttgaaaagctatgcagatctagaagatacctctatgtccgactggat
ggcacaatgtccatcaagaaaagggccaagattgtggaaagattcaacagtccatctaac
ccagagttcatcttcatgctgagcagcaaggctggtggatgtggcctgaatctgattggt
gctaatcgcttggtgatgtttgatcctgactggaacccagccaatgatgaacaggcaatg
gcacgggtctggagagatggccagaagaagacatgctatgtctacagactgctctccaca
gggacaatcgaggagaagatcctgcagaggcaggcccataagaaagccctgagcagctgt
gtggtggatgaggagcaggacgtggagcgtcacttctctctgggtgaactccgagaactc
ttcattctcaatgaggagaccaccagcgacacacatgacaagtttcgttgtcaccgctgt
gttaatggcagagaggttcggcctcctgcagatgactctgactgtaccagtgacctttcc
cagtggaaccacagctttgacaagaagggcctgatggaccaagtgttgaaagcctcctgg
gatgctgctgtctcctttgtcttccaccagcgctctcatgaggaccagaagggtgcagta
tag
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