Xiphias gladius (swordfish): 120791367
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Entry
120791367 CDS
T07311
Symbol
trmt13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xgl03016
]
120791367 (trmt13)
Enzymes [BR:
xgl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
120791367 (trmt13)
Transfer RNA biogenesis [BR:
xgl03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120791367 (trmt13)
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Motif
Other DBs
NCBI-GeneID:
120791367
NCBI-ProteinID:
XP_039985729
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Position
LG6:322682..329952
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AA seq
460 aa
AA seq
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MAAPLPGRCGFFVEKKKRFCKMVVGRGKMFCGEHATMEEGSGSSSSSRRRIICPLDPKHT
VSEDKLDKHLKKCNSRERDKPVYYAENINAGPADGDETLQQASLCERSRTELESLVDKLK
TAVGGLQTDVEDSVLSHPVLLEELSNPKNGESAHKHLKQQSSILGHLEELGLLGGGRCFV
EFGAGRGKLSHWIHEALKTCKDLQLLLVERCSTRFKVDGKHQEAGVQFERLQVDIQHLDL
SKVPLLRQKKLPLVGVGKHLCGAATDLALRCLLETPGLREETEPPTKRLKISEPAADREP
DPDSGSVPGDPGPASDPGPSSGPVLGLAVALCCHHRCEWRHYVGQQFFLQQGLGAAEFSA
FCRMSSWATCGLRATNQDCPPLDPTNQRRDEEEHEATEGTDAVNGFLSAGEREQIGRLCK
LLIDSGRLHFLGSKGFRSKLTRYVGTQVTLENMLLTAVPS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccccctgccaggcagatgtggattcttcgtggagaaaaagaagcgtttctgt
aaaatggtcgtcgggagagggaagatgttctgtggggaacatgccaccatggaggaggga
agcggcagcagcagcagcagcaggaggaggatcatctgtcctctggacccaaaacacacc
gtgagtgaagacaaacttgacaaacacctgaagaaatgtaactccagagagagagacaaa
cctgtttactatgctgagaacataaacgctggaccggctgatggagacgagactctgcag
caggccagtctgtgtgagcgcagcaggacggagttagagtctctggtggacaaactgaag
acagcggtcggaggactgcagactgacgtggaggacagtgttctgtcacaccccgtcctt
ctggaggaactcagcaacccaaagaacggagagtccgctcacaagcacctgaaacagcag
tcctctatcttaggtcatctggaggagctgggactgctgggaggggggcggtgctttgtg
gagttcggagcaggtcgagggaaactctctcactggatccacgaggccctgaagacctgc
aaagacctgcagctgctgctggtggagcgctgcagcacccgtttcaaggtggatgggaaa
catcaggaagctggagttcagtttgagaggctgcaggtcgacattcaacatctggattta
agtaaagtccctctgctgagacagaagaagctcccgttggtcggagtagggaagcacctg
tgtggagcagccacagatctggctctgcgctgtttgttggagacaccgggactcagagag
gagactgaaccaccaacaaaacgcctcaaaatctcagaaccggctgctgaccgtgaacct
gatccagactctggctctgtccctggtgatccaggaccagcctctgatcccggtcctagc
tctggccctgtcctcggcctggcggtggcgctgtgctgtcaccatcgctgtgagtggcgt
cactacgtgggtcagcagttcttcctgcaacaaggactcggagctgcggagttctccgct
ttctgtcgaatgtccagctgggcaacatgtggactcagggcgaccaatcaggactgtcca
cctctggatccgaccaatcagagaagagacgaggaagagcatgaagcaacagagggaaca
gatgccgtgaacgggtttctgtcggcaggtgaacgagagcagatcggtcgtctctgtaaa
cttctcatcgacagcggcagacttcacttcctgggttcgaagggattcaggagcaaactg
actcgatatgtcggcactcaggtcactctggagaacatgttactgaccgctgtgccctcc
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