Xiphias gladius (swordfish): 120791532
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Entry
120791532 CDS
T07311
Symbol
atg16l1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04136
Autophagy - other
xgl04140
Autophagy - animal
xgl04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120791532 (atg16l1)
04136 Autophagy - other
120791532 (atg16l1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120791532 (atg16l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120791532 (atg16l1)
03029 Mitochondrial biogenesis [BR:
xgl03029
]
120791532 (atg16l1)
Membrane trafficking [BR:
xgl04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
120791532 (atg16l1)
Others
Specific organelles associated proteins
Auto phagosome
120791532 (atg16l1)
Mitochondrial biogenesis [BR:
xgl03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120791532 (atg16l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ATG16
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_IFT122_1st
NBCH_WD40
WD40_RFWD3
eIF2A
Beta-prop_IFT140_1st
Beta-prop_SPT8
PUMA_CC
Beta-prop_HPS5
Beta-prop_DCAF12
AP5B1_middle
HEF_HK
NET2A
DUF1664
HALZ
Motif
Other DBs
NCBI-GeneID:
120791532
NCBI-ProteinID:
XP_039985898
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All DBs
Position
LG7:complement(26461995..26483413)
Genome browser
AA seq
620 aa
AA seq
DB search
MAERRVECTWKRHISEQLKLRDQVQRQAFEEIIHQYNRLLEKSDLQAVLSERYQTEKYDV
QRGHEASLGADSSRSDALQQEMAQMRIKHQEELTELHKKRGELAQSVIELNNQIQQKDKE
IQSNEAKMLEYQQQIANLEGDCRELKNYLQDLERANQTLKDEYDALQITFSALEEKLRKT
TEDNQELVSRWMAEKAQEANRLNAENEKDSRRRQAKLQKELADAAKEPLPIDPDDDIEVL
AEDGGKGGGETSPNRPLSRTPSKKISQPPPGGLLDSISNIFGVSECVQPGLLPPHSRRRT
ANSFSTSPENHEAPSGVCAEVRVPTTALHVFEAHDGEVNAVRFSPGSRLLATGGMDRRVK
LWEVVAGRCEPKGALTGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGH
SGKVLSARFLLDNARIVSGSYDRTLKLWDLRSKVCMKTVFAGSSCNDIVCTEQCVMSGHF
DKKVRFWDIRAESIVRELELLGRVTSLDLNHDRTELLTCSRDDLIKIIDLRTNAVRQTFS
AQGFKCGADWTRVTFSPDGSYVTGGSADGALYVWNVLTGKVDRTLDRNHNSAINSVSWSP
SGAYVASVEKGSKAILWSDM
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggcgggtggagtgcacatggaaaagacacatctcagagcagctgaagctc
agagaccaagtgcagagacaggccttcgaggagatcatccaccagtataaccgtctgctg
gagaagtccgacctgcaggctgttctgtcagaaagataccagaccgagaaatatgatgtc
cagagaggacatgaggccagtttgggtgcagactcaagtcgcagcgacgctctgcagcag
gaaatggctcagatgagaattaaacaccaggaggagctgacggagctacacaagaagcga
ggggagctggctcagagtgtgattgagctgaacaaccagattcaacaaaaagacaaagag
atccagagcaatgaggccaagatgttggagtatcagcagcaaattgccaacctggaggga
gactgtcgggagcttaagaattacctgcaggacttggagagggcaaaccagaccctgaag
gacgagtacgacgccctgcagatcacgttctctgctctggaggagaaactgaggaaaacc
acagaggacaaccaggagcttgtgtctcgatggatggcagagaaagctcaggaggccaac
aggctgaacgctgagaacgagaaggacagcagacgcagacaggccaaactgcagaaggag
ctggcagatgctgccaaagaacctctgcccatcgacccggatgacgacattgaggttctg
gctgaagatggagggaaggggggaggagagacctcaccgaacagaccgctcagcagaact
cccagtaagaaaatctctcagcctcctcctggtggtctgctggactctatctccaacata
tttggagtgtctgagtgtgttcagcctggactcctcccaccacactccaggcgtcgaact
gctaactctttcagcacttcacctgaaaaccatgaggctccatcaggagtgtgtgcagaa
gttcgagtcccaaccacagccctgcatgtgtttgaagcccatgacggtgaggttaacgcg
gtcaggttcagccccggctcccgtctgctggctacaggagggatggaccgcagggtgaag
ctgtgggaggttgttgcaggtcgttgtgagcctaaaggagctctgaccggcagtaacgca
ggaatcaccagcattgagtttgacagcgctggttcgtacctgctggctgcctctaatgac
tttgccagtcggatctggactgtagatgactacagactgaggcacaccttgacaggtcac
agtgggaaggtgctgtcggctcgtttcctattggacaacgctcggatcgtctccgggagc
tatgaccgaacgctcaaactgtgggatctccgcagcaaagtctgtatgaagacggtgttt
gctggttccagctgtaacgacatcgtctgtacggagcagtgtgtcatgagtggacacttt
gataagaaagttcgattctgggatatcagagcggagagtatagtacgagagctggagctg
ctgggcagagtgacgtctctggacctgaaccatgaccgaaccgagctgctcacctgctcc
agagacgacctgataaagatcatcgatctgcgcaccaatgctgtcagacagacattcagt
gctcagggcttcaagtgtggagctgactggaccagagtcaccttcagtccggacggtagc
tacgtgactggaggatcagctgatggagctctgtacgtctggaatgtcctgacagggaaa
gttgacagaactctggaccgaaaccacaactctgccatcaattcggtgtcctggtcccct
tcaggagcgtacgtggccagtgtggagaaaggcagcaaggccatcctgtggtctgacatg
tga
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