Xiphias gladius (swordfish): 120791542
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Entry
120791542 CDS
T07311
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04137
Mitophagy - animal
xgl04140
Autophagy - animal
xgl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120791542 (hif1al)
04137 Mitophagy - animal
120791542 (hif1al)
04148 Efferocytosis
120791542 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120791542 (hif1al)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
120791542 (hif1al)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1
PAS
PAS_9
PAS_4
CENP-B_dimeris
TPR_TTI1_C
CobT
NOA36
DNA_pol_phi
Paf1
Cytomega_UL84
Motif
Other DBs
NCBI-GeneID:
120791542
NCBI-ProteinID:
XP_039985915
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Position
LG7
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AA seq
704 aa
AA seq
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MEKKEETVAVKRSSSEQRKLRSRDAARCRRSQETEVFYELARTLPLPRRVSANLDKAAIM
RVTLSFLRVRRLLRSGEHQKEESEEEEEEEEKEEEKEKEEEKEEVEEEEEEDPMDTFYPQ
ALGGFIMVTTEEGDMIYLTENVSRHIGITQLELLGQSVYDFVHPCDQEELRDLLTPRPGL
SKNSTAEQQSGRNFFLRMKSTLTSRGRTVNIKSATWKVLHCTGHMRPFGGSSASPPAARV
MTLLCEPIPHPSSVEFPLDTCTFLTRHSMDLRFTHCEGRVKELVGYKPDDLIGRSAYEFH
HALDSDHVNKSLHTLLSKGQVSTSHYRFLANSGGFVWAETQATVLYSSKTLQPEAVVCLN
FILSAVEQPDVVFSVEQIRCSRLPKAEPHSPALAPEDCESSAICDSEGEHLANSSQTEDA
GSSPSSPADLFFKLKEKPEELLQLAPEAGDAIVPLTGGFVELSFVSPASPNSVPDHPQDL
CTPQLRQLLTPIFNPITPIPPSSAASSPDREPSPCEEEDLVEEVMDTSKVEKFFAIWPED
GQQKGETQENMEGMDLDMLAPYISMDDDFQLTFLSSLPEEADKSPSTSSDPSAVTPAVTG
SRKRTHKPDEDMPSQLLIQDKRQRQYPSSAEEELVLSHRLLDCLEETDQSDLMLDSGPGG
RSQLLTDRDPILGGIQGLCDTAALMRDIFVARPPDLLPPLSPMT
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaagaggaaaccgtcgccgtcaaacggagcagttcggagcagaggaagctg
cgttctcgtgatgcagccagatgtaggcggagtcaggagacggaggtgttttatgagctc
gcccgcactctgccactcccccgccgcgtgtccgccaacctggacaaagctgccatcatg
agagtcaccctcagcttcctgcgcgtgcgccgcctcctgcgatccggtgagcatcagaaa
gaggagtctgaagaggaagaggaggaggaggagaaggaggaggagaaggagaaggaagaa
gagaaggaggaggtggaagaggaggaggaggaagatccaatggacactttctatcctcag
gcgctgggtggattcatcatggtgacgactgaggaaggggacatgatctacctgacggaa
aacgtcagcagacacatcggcatcactcagctggagctgctgggtcagagtgtgtatgac
tttgttcatccctgtgatcaggaggagctcagagacctgttgactccacgcccaggtttg
agtaagaactcaactgcagaacagcagagcgggaggaacttcttccttcgaatgaaaagc
acactgaccagcagggggcgcaccgtcaacatcaagtctgctacctggaaggttctgcac
tgcacaggtcacatgcgaccctttggcggcagctccgcgtcgccccctgcagccagagtg
atgactctgctgtgtgagcccatccctcacccgtccagcgtggagttccctctggacacc
tgcaccttcctcacccgccacagcatggacctgcgcttcacgcactgcgagggcagggtt
aaagagttggtgggatacaaacccgatgatctgattggtcgctcagcctatgagttccat
cacgcgctcgactctgatcacgtcaacaaaagcctgcacacactgctgtccaaaggtcag
gtgagcaccagccactaccgtttcctggcaaacagcgggggcttcgtctgggcagagacc
caggcgactgtcctctacagcagcaagacgttgcagcccgaggccgtcgtctgcctcaac
ttcatactcagtgccgtggagcagccagatgttgttttctctgttgagcagatccgttgt
agccggctgcccaaagctgaaccccactcaccagcgctggcgccggaggactgtgagtct
tccgccatctgcgactctgagggcgagcatcttgccaactccagccagactgaggacgct
ggttcgagtcccagcagccccgcagatctcttcttcaaactaaaggagaagccggaggag
cttctccagttggctcccgaggccggagacgccatcgtaccactgacaggaggtttcgtc
gagctgtcgttcgtcagtccagccagtccaaactccgtgccggaccaccctcaggatctg
tgcactccacagctgcgacagctcctcacacccatcttcaaccccatcacgccaattccg
ccgtcatcagcggcgtcctcacctgatcgcgagccaagcccctgtgaggaggaggacttg
gtggaggaggtgatggacacaagcaaggtggagaagttctttgccatttggccagaagat
ggtcagcagaaaggagaaacacaggagaacatggaggggatggatctggacatgttggct
ccctacatctctatggacgatgacttccagctgaccttcctcagcagtttgccagaggaa
gccgacaaatctccgtccacttcgtccgacccttcagctgtgacacctgcagtcacgggg
agcaggaaacggactcataagccagatgaggacatgccgtctcagctgctgattcaggac
aagagacagagacagtatccttcctcagcagaagaggaacttgttctcagccacagatta
ctggactgtctggaggaaaccgaccagtccgatctgatgttagactcaggcccggggggt
cggagtcagctactcacagacagagaccctattttaggaggcatacaaggactctgtgat
actgccgctctgatgagggacatattcgtagctcgcccacctgacctgttgccgcctctc
tcgccaatgacctga
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