KEGG   Xiphias gladius (swordfish): 120791556
Entry
120791556         CDS       T07311                                 
Symbol
polr2i
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
xgl  Xiphias gladius (swordfish)
Pathway
xgl03020  RNA polymerase
xgl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    120791556 (polr2i)
  09124 Replication and repair
   03420 Nucleotide excision repair
    120791556 (polr2i)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xgl03021]
    120791556 (polr2i)
   03400 DNA repair and recombination proteins [BR:xgl03400]
    120791556 (polr2i)
Transcription machinery [BR:xgl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     120791556 (polr2i)
DNA repair and recombination proteins [BR:xgl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      120791556 (polr2i)
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS Ogr_Delta Zn_ribbon_recom Zn_Ribbon_TF Zn_ribbon_GRF_2 HVO_0758 Zn_ribbon_NrdR GpA_ATPase SR1P Lar_restr_allev Zn_ribbon_Top1 DUF3716 Zn_ribbon_IS1595 DZR
Other DBs
NCBI-GeneID: 120791556
NCBI-ProteinID: XP_039985936
LinkDB
Position
LG7:9065917..9069539
AA seq 126 aa
MDLDSGTYEPGFVGIRFCQECNNMLYPKEDKENRVLLYACRNCDYQQEADNSCIYVNKIT
HEVDELTQIIADVSQDPTLPRTEDHPCPKCGHKEAVFFQSHSMKAEDAMRLYYVCTAPHC
GHRWTE
NT seq 381 nt   +upstreamnt  +downstreamnt
atggatttagacagtggaacatacgagccaggatttgtcgggatacggttttgtcaagag
tgtaacaacatgttgtaccccaaagaagacaaggagaaccgtgtactgctttatgcgtgc
aggaattgtgactaccaacaagaggcagacaacagctgcatctacgtcaataagatcacc
catgaggttgatgagttgacacagatcatcgctgatgtatcccaggatccaacgctgcca
aggacagaggaccacccctgtcccaaatgtggtcacaaggaggcagtgttcttccagtct
cacagtatgaaggctgaggatgctatgagactatactacgtctgcactgctcctcactgt
ggacacagatggacagagtaa

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