Xiphias gladius (swordfish): 120791649
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Entry
120791649 CDS
T07311
Symbol
snrpa
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120791649 (snrpa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xgl03041
]
120791649 (snrpa)
Spliceosome [BR:
xgl03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
120791649 (snrpa)
Complex B
120791649 (snrpa)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
DUF4523
xRRM
Motif
Other DBs
NCBI-GeneID:
120791649
NCBI-ProteinID:
XP_039986105
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Position
LG7
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AA seq
282 aa
AA seq
DB search
MATADVRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVARNLKMKGQAFVIFK
EINSASNALRSMQGFPFYDKPMRIQYAKQDSDIIAKMKGTYVERDRKKEKKKTKGPDAAG
AKKGVPGAAAPMVAGVPAAMPGMPPMSQAPRMMHMPGQPPYMPPPGMMPPPGMAPGQMPP
GAMPPGQMMPGQMPGQMPQQVAENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV
PGRHDIAFVEFENEVQAGAARDALQGFKITQTNAMKISFAKK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggctacagcagatgtacggcttaaccatacaatctacatcaacaacttgaatgagaaa
atcaagaaagatgagctgaaaaagtctctgtacgccatcttctcacagttcggacagatt
ttggacatcttggtcgcacgaaacctgaagatgaagggtcaagcttttgtaatcttcaag
gagattaacagcgcctccaatgctctgagatccatgcagggattccctttctatgacaaa
ccaatgcgtatccagtatgcgaagcaagactcagacatcatagcgaaaatgaaggggact
tatgtggagcgtgatcgtaaaaaagagaagaagaagaccaaaggacccgatgcggcagga
gctaagaaaggtgtcccaggagctgctgcacccatggtcgctggggtacctgctgccatg
cctggaatgcctcccatgagccaggcaccccgcatgatgcacatgccaggccagccgccc
tacatgccccctccaggcatgatgcctcctccagggatggcacctggtcagatgccccct
ggtgccatgcctccgggtcagatgatgcccggacagatgcccggacaaatgccccagcag
gttgcagaaaatcctcccaatcacatcctcttcctcaccaacctgccagaagagacaaac
gaacttatgctctccatgctcttcaaccagttccctgggttcaaggaggtgcgtctggtc
cccggtcgccacgacatcgcctttgtggagtttgagaatgaagtgcaggccggcgctgca
cgagatgcactacaaggctttaagatcacacaaacaaatgccatgaagatctctttcgct
aagaaataa
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