Xiphias gladius (swordfish): 120791655
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Entry
120791655 CDS
T07311
Symbol
lamp1a
Name
(RefSeq) lysosome-associated membrane glycoprotein 1a
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03272
Virion - Hepatitis viruses
xgl03273
Virion - Lassa virus and SFTS virus
xgl04140
Autophagy - animal
xgl04142
Lysosome
xgl04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
120791655 (lamp1a)
03272 Virion - Hepatitis viruses
120791655 (lamp1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120791655 (lamp1a)
04142 Lysosome
120791655 (lamp1a)
04140 Autophagy - animal
120791655 (lamp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120791655 (lamp1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xgl04147
]
120791655 (lamp1a)
04090 CD molecules [BR:
xgl04090
]
120791655 (lamp1a)
Membrane trafficking [BR:
xgl04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
120791655 (lamp1a)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
120791655 (lamp1a)
Other autophagy associated proteins
RNautophagy/DNautophagy
120791655 (lamp1a)
Exosome [BR:
xgl04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
120791655 (lamp1a)
CD molecules [BR:
xgl04090
]
Proteins
120791655 (lamp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
VAS1_LD
DEC-1_N
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
120791655
NCBI-ProteinID:
XP_039986121
LinkDB
All DBs
Position
LG1:complement(23604482..23613432)
Genome browser
AA seq
416 aa
AA seq
DB search
MKLARAFAALVIACLAVLGCIQAVTLEVKEGNSTCIKAELSASFSITYNTSSSTRTVQVP
LPDSATVDSGSSSCGTDDSSPWLVAAFGPGHALRLSFATDGSQYSVATLALQYNLSDSSY
FPDANSSEVVTVVSTSVGIWATINTTYRCMSPTTFRVDGATVTFSAMRLEAYMPGNDLSP
TESVCMADKASTTAPTTTAATTTTAAPSPAPPGTPERGTYSVNNGNGTVCLLAQMGLQFN
ISYVSKSQNKTVQDLVNLTPNLTSSSGSCEASRATLVLTQEQTTTLSFTFTLNSTTSRYH
LSGIALLANWSDMTAPFSVSNIGLDYLRSTLGRSYMCNAEQTLVVEPTLSLNTFRLQVQP
FGVTTNQFATAEECQMDQDQMLIPIIVGAALAGLVLIVLIAYLIGRKRSHAGYQTI
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgctcgggctttcgccgcgctcgtaatcgcctgcctggcggttttaggctgt
attcaggctgttactcttgaggtgaaggaggggaactccacctgcattaaggctgagctg
tcggcatcattctccatcacatacaacacctccagcagcacaagaacggtgcaggtccct
ctgcctgactccgccacagtcgactcaggcagcagctcgtgcggcacagacgacagctca
ccgtggctggtggcggcgtttggacccggccacgcactgaggctgagctttgcaaccgat
ggaagtcagtacagtgtcgctaccctagcgctgcagtacaacctcagcgactcgtcgtac
ttccctgacgccaacagctccgaagtggtcactgtggtgtcgacttcagttgggatctgg
gcgacgatcaacaccacctaccgctgtatgagccccaccacttttagagttgacggagca
actgtcactttctctgctatgaggctagaagcgtacatgcccggaaatgacctgagtcca
acagaaagcgtatgtatggcggataaggccagtactacagctccaaccaccaccgctgct
actactacaacagcggctccgtcaccagcccctccaggaacacctgaacggggaacctac
tctgtgaacaacggcaacggcacggtttgtctcctggcccagatgggactgcagttcaac
atctcctatgtctctaaatctcagaacaagactgtccaggacttagtaaacctgactccc
aatctgacaagttcatcaggatcatgtgaagccagcagagctaccttggttttgacacaa
gagcaaactaccacgctcagcttcaccttcactctgaactccacgaccagcaggtatcac
ctgagtgggatagctctgctcgctaattggtccgatatgactgctcccttctcagtcagt
aacattggtctggactacctgcggagtacgctgggccgctcttacatgtgcaacgcagag
caaactttggtcgtggaaccaaccctctctctcaacacattcagactgcaggtccagccc
tttggagtcaccactaaccagtttgctacagcggaggagtgtcagatggaccaagaccag
atgctcatccccatcattgtcggagcagctctcgccggcctggtgctgatcgtgctcatt
gcgtacctaataggcaggaagaggagccatgctggataccagaccatctga
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