Xiphias gladius (swordfish): 120791680
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Entry
120791680 CDS
T07311
Symbol
nectin1b
Name
(RefSeq) nectin cell adhesion molecule 1b isoform X1
KO
K06081
poliovirus receptor-related protein 1
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03266
Virion - Herpesvirus
xgl04514
Cell adhesion molecule (CAM) interaction
xgl04517
IgSF CAM signaling
xgl04520
Adherens junction
xgl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
120791680 (nectin1b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120791680 (nectin1b)
04517 IgSF CAM signaling
120791680 (nectin1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
120791680 (nectin1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120791680 (nectin1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xgl04515
]
120791680 (nectin1b)
04090 CD molecules [BR:
xgl04090
]
120791680 (nectin1b)
Cell adhesion molecules [BR:
xgl04515
]
Immunoglobulin superfamily
Nectin family
120791680 (nectin1b)
CD molecules [BR:
xgl04090
]
Proteins
120791680 (nectin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
Ig_3
V-set
Ig_2
ig
I-set
Ig_PVRIG
TM_ErbB1
Phage_Coat_B
Motif
Other DBs
NCBI-GeneID:
120791680
NCBI-ProteinID:
XP_039986170
LinkDB
All DBs
Position
LG7
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AA seq
499 aa
AA seq
DB search
MAMCVGMWILLLALHIQAGNGQMVQMDPSKSGFVGSQVELRCIFINSNPPVKISQVTWQK
LLNGTKQNVAIANPALGVSVLPPFKERVSFKQAAVRHRTPSLEDTTIVFSNLQLSDEAAY
ICEYTTFPAGNRENMVNLTVFARPMTRMTLTTPTIVARAQKRKMTVATCVSANGKPPSVI
KWDTRLKGEATFQETRNQNGTVTVRSNYVVIPSRETHKQKLTCIVTYRNEKITDSVVLNV
QYEPEVKIEGFDGNWYLNRQNVQLTCRADANPPVTIYQWKLLNGSLPSNVEIKNNTLFFK
GPVTYDLAGTYVCDATNGIGTRTGVVDVNITEFPNNPSPGGHEIPQEQHNAGAAIGGAVG
GVALLGVAAILLFVFLRRRQRTFKGDYSTKKHVFGNGYSKAGGLPAHPPIPKNLQYPDDS
DDEKKPAQIGGPGGFEASERDFDAEAEDLKRPYFTVDEGESRDYDDRTLAFQYDPEPEIA
DDMISQTDGSVISKKEWYV
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgtgtgtggggatgtggatactcctgttggcgctgcacatccaagctggcaat
ggacagatggtacagatggaccccagcaagtctggctttgtgggttcacaagtggaactg
cgctgcattttcatcaacagtaacccaccagtcaagatctctcaagtcacctggcagaag
ctgctcaacggcaccaaacagaacgtggccatagccaacccggcgctcggtgtgtctgtc
ctgccgcccttcaaggagcgggtcagcttcaagcaggcagcggttcgtcatcgtacgccc
tcgctggaggacaccaccatcgtgttctctaacctgcagctgtctgatgaagctgcatac
atctgcgagtacaccactttccctgctggcaaccgggagaacatggtcaacctcactgta
tttgctcgtcctatgacacgtatgaccttgacaacgcccacgattgtggccagagctcag
aaacgcaagatgactgttgccacctgtgtatcagccaacggcaagcccccgagtgtgatc
aaatgggacaccaggttgaagggcgaagccactttccaggagactcgcaaccaaaacggg
acggtgacagtacggagcaactacgtggtgataccgagccgcgagacccacaagcagaag
ctcacttgcatcgtgacataccgaaatgaaaagatcacagacagcgtggtgctcaacgtg
cagtatgaacctgaggtgaagatcgagggctttgatggaaactggtacctgaaccgtcag
aatgtgcagctgacctgcagggccgatgccaacccccctgtcacgatctaccagtggaaa
ctcttgaatggctccctgcccagtaatgtggagatcaagaacaacaccctcttcttcaag
ggccccgtgacctacgacctggccggcacgtacgtctgtgacgcaaccaacggcatcggg
actcgcaccggcgtcgtggacgtcaacatcacagaattccctaacaacccgtcacctggg
ggccatgagatcccgcaggagcagcacaatgcaggtgccgccatcgggggcgctgtgggg
ggagtcgccctcttgggcgtggcagccatactgctcttcgtattcctgcgccgccgtcag
cgcaccttcaagggagactacagcaccaagaagcatgtgttcggaaacgggtacagcaag
gccggtggcctgcccgcccacccccccatccccaagaacctgcagtacccggacgactcg
gatgacgagaagaaacccgcccagatcggtggccctggagggtttgaggcgagtgagcgc
gattttgacgccgaggcagaggacctgaagaggccctatttcactgtggacgaaggagag
agccgagattatgacgaccggactctggctttccagtatgaccctgaacctgagatagcc
gatgatatgatctctcaaaccgacggctccgtcatttctaagaaagagtggtatgtgtag
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