Xiphias gladius (swordfish): 120791734
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Entry
120791734 CDS
T07311
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120791734 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120791734 (trip12)
Enzymes [BR:
xgl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120791734 (trip12)
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
HECT type E3
120791734 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
120791734
NCBI-ProteinID:
XP_039986290
LinkDB
All DBs
Position
LG7:complement(11436083..11466708)
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AA seq
2058 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPQDHTVAGRLQSEQVKHKANSPPESRRPNSKASKAT
ASTATGQSRGHSSRRSGLTLSVASFVLQDDPEAAGTSEQERPGHQSKSEGTRGLKRSEAP
DQISTFGPTPAKKPKSLPPPRDNTSETKKGPAKSKKRSLASEPPASSGRGQSKKSGPSGA
SPIQKRKKADSLPGLSSTAGSLPNRTEGRTAKPTKLASKSAASAKAGCSNVTDSSSSAST
SSSSSTTGTNSATTQGARVKQGKDQTKARRSRSASSPSPRRSTRDKEQAKSASSSKFEWA
TRFSPKVNLPKPKLSLPGSSKTETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSYRRS
TRQKTTGSCASTSRRGSGLGKRGAADARRQEKMADSDNNQDGANSSAARTDEASQGASAS
SSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASS
KAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFD
IMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKA
ILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDK
KSVESTCLCFARLVDNFQHEENLLQEVASRDLLTNIQQLLVVTPPVLSSGMFIMVVRMFS
LMCSNCPCLAVQLMKQNIAETLRFLLCGASNGSCQEQIELVPRSPQELYELTSLICELMP
CLPREGIFAVDVMLKKGSAQTTEGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISL
STLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPNTGSHQEVRREDARAQLMKEDPE
LAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLRNHAVSSHIAS
MLSSQDLKIVVGSLQMAEILMQKLPDVFSVYFRREGVMHQVKNLAESESFLVTSPPKACP
SGTASLCTTTISTASTTSANNATPDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRG
PRRPKYSPPRDDDKVDNQAKSPTSTQSPKSSFLASLNPKTWGKLGAQTNNANSEPSRTAG
VSGLARAPPKDSISNNRDKIKAWIKEQASKFVECYFNSENVDGSNPALNVLQRLCTATEQ
LNLQVDGGMECLLEISSIVSESDVSSFEIQHSGLVKQLLVYLTSNSDRDLLSRDVRLKRF
LHVFAGCPVPGMEPVGRLDPTENGPYLALVHKMNSCLSQMEQFPVKVHDFPSGNGNGSRG
SQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRGYGRIREED
EDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQAVRQYSLQAEEER
ESTDDEANPLGRAGIWTKTHTIWYKPVREDEDGSKDAVGGKRGRAQTAPTKTSPRNAKKQ
DELWHDGVCPSVINPLETYLTSEPPETITFDDPSLEVNLLLRVLHSISRYWFYLYDNAVC
KEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLIELGKTCPFFFPFDTRQMLFYVT
AFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINRDELLKQAESVMQDLGSSRA
MLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGSQEGTKYMFSSR
GLFAIPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGLPFYKWMLRHEMSVS
SHDLVNIDPSVAKSIQHLEDIIRQKKRLEQDRSQTRETLQQALESLNMNGCSVEDLGLDF
TLPGFPNIELKKGGKDVPVTIYNLEEYLRLVVYWTLNEGVSRQFESFREGFESVFPLHHL
QYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAVRFLFEVLSSFDAEQQRLF
LQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIEIM
REKLLIAAREGQQSFHLS
NT seq
6177 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacact
gctgcggcccagccacaagaccacacagtcgcgggaaggttgcagtcagagcaggtaaaa
cataaagcaaattccccacctgaaagtagaagacctaattctaaggcttccaaagccaca
gccagcacagccactggccagtccagagggcacagctcaagaagaagcggtcttactctg
tccgtggcttcatttgtgttgcaagacgacccagaggctgcagggacatctgaacaagag
cgaccaggccaccagtcaaagagtgaaggtacccgagggctaaagcgaagtgaagctcca
gaccaaattagtaccttcggaccgacccctgccaagaagcccaaatcactccccccaccg
cgagacaatacctcagagaccaagaaaggcccagctaagtccaagaagagatcacttgct
tcagaaccacctgcatcgtcaggtcgaggtcagagcaagaagagcgggccctctggggcc
tcaccaatccagaaacggaagaaagctgactctctccccggtctaagtagcaccgctggg
tccctccccaatcgtaccgagggcagaactgcaaaacccaccaagctggcgtctaaatcg
gccgcctcagccaaagctgggtgtagcaacgtgacagactcctcctcctctgcctccacc
tcttcctcttcctccacaacaggcaccaacagcgccaccacgcagggtgcccgagtcaaa
cagggaaaagatcagaccaaggcacgtcgctctcgctcagcctcaagcccctccccacgc
cgtagtacccgtgacaaggaacaggccaaatctgccagctcttcaaaatttgagtgggca
acacgcttcagccccaaggtcaacctgccaaaacccaaactgtctttgcccggatcctcc
aaaactgagacctccaaacctgggccatcaggattacaagctaaactagcaagtttgagg
aaatccactaagaagcgcagcgagtctcctccagcagagctccccagctatcggcggagc
acacgccagaagaccacgggctcctgtgccagcaccagtcggcggggctcaggcctaggc
aagcgcggggcagccgacgctcgccgacaggagaaaatggctgactccgacaacaaccag
gatggggccaactcatcagccgctcgcaccgatgaggcatcacaaggggcttcagcttca
agctcagttgctggagcagttggcatgaccacctctggagagagtgagtctgatgactct
gaaatgggaaggcttcaagccctactggaggccaggggtctccccccacatcttttcggg
ccgctgggaccccgcatgtcgcagctgtttcacaggaccataggcagtggagccagctcc
aaggctcagcagctactgcagggtctacaggccacaggcgacgagtctcagcagctccaa
gctgctattgagatgtgccagctgctggtgatgggcaatgaggagacacttggtggattc
cctgtcaagagtgtggtgcctgctttgattacactgttacaaatggagcataactttgat
attatgaatcatgcctctcgtgcactcacatatatgatggaggcactgcctcgatcttct
gccgtggtggtcgatgctattcctgtcttcctggagaagcttcaggtgatccagttcatt
gacgtagcagagcaggccctgacggccttggagatgttgtcaaggcgacacagcaaagcc
attttacaggctggtgggcttgctgactgcctcctctacttagagttctttagcatcaat
gctcagaggaatgccttggccattgcagccaactgctgccagagcattactccagatgag
ttccactttgttgctgattctctgccactgttgactcagagactaacacaccaggataaa
aaatccgtcgaaagcacttgtctctgttttgccagactggtggacaactttcaacatgaa
gagaacctgctgcaggaggtcgcatcgcgggacctgttgacgaacattcagcagctgctc
gtggtgacccctcctgtactcagctcggggatgttcatcatggttgtgcgtatgttttcc
cttatgtgctcaaactgcccctgcctggcagtccagcttatgaaacagaacatagcagaa
actctacgtttcctcttgtgtggtgcatcaaatggcagctgccaggaacagattgaactg
gtaccccggagcccccaggagctctatgaactgacctctctcatatgtgagcttatgccc
tgcctgcctagagagggcatctttgccgttgatgtaatgctgaagaagggtagtgcccag
acaactgagggcgcgatctggcagtggagggatgaccggggactatggcatccttacaac
cgcattgacagccgcatcattgagacggcccaccagaatggagaggatgagatcagcttg
tccactctgggccgtgtgtacacaattgacttcaactctatgcagcagataaatgaagac
acaggaacagcacgcggtatccagaggaaaccaaatcctcttgccaaccctaatacaggg
agtcaccaggaggttcgtcgtgaagatgcacgagcccagttgatgaaggaggaccctgaa
ctggcaaagtgctttatcaaaactctgtttggggtgttatatgaggtgtacagctcatcg
gctggccctgctgtcagacacaagtgccttagagccatcctcaggatcatctactttgct
gatgcagagctgctgaaggatgtgctcaggaaccatgctgtgtccagtcacattgcctcc
atgctgtccagccaggacctgaagattgtagtaggttctctgcagatggctgagatcctc
atgcagaagctgcctgatgtcttcagtgtctatttcagaagagaaggtgtaatgcaccag
gtgaagaacctggcagagtctgagagctttctagtcaccagtccccctaaggcttgccct
agtggtactgcaagtctgtgcactaccaccatcagcactgcatccaccacatctgctaat
aatgctactccagacctgggctcgcccagcttccagcacagcatggacgactcactggac
ctcagcccacaggggcgactaagcgatgtcctaaagaggaaacgactacctaaaagaggg
cctagaaggcccaaatactctcccccaagagatgatgataaagtagacaatcaggccaaa
agccctaccagtactcagtcacccaaatcatccttcttggccagtctcaatcccaagacc
tggggcaagctaggtgcccagaccaacaatgccaactcagagccctcacgcacagcgggg
gtgagtggcctggcaagggcacctcccaaggactcaatttcaaataacagagacaaaata
aaggcctggatcaaagaacaagctagtaagtttgtggagtgttactttaactctgaaaat
gtggatggcagcaaccctgcactgaatgtactccaaagactttgcacagccactgagcag
ctcaacctgcaggtggatggtggtatggagtgcctgctggagatctccagtattgtatca
gaatctgatgtgtcgtcttttgagatccagcacagtgggctggtgaagcagctcttggtc
tacctgacatccaacagcgacagggacttgctgagtcgtgatgtacggctcaagaggttc
ctccatgtcttcgctggctgtccggttccaggaatggagcctgtaggtcgtctagaccca
acagagaatgggccttacctggcactggtgcacaagatgaacagctgtctgagccaaatg
gagcagttccctgtcaaagtgcacgacttccccagtggcaacggcaatggcagcaggggc
tctcaggcactaaagttcttcaacacacatcagctcaagtgtcagctgcagagacaccca
gattgcactaatgttaaacagtggaaaggtggccctgtgaagatagaccccctggccctg
gtgcaagccattgagcgataccttgtcgtcagagggtacggccgaatcagagaagaggac
gaagacagtgatgatgatggttcagatgatgaaatagatgaatcactggcagcgcagttc
ctgaattctggcagtgtgcgtcacagattacagttctacattggtgaccacctgctacca
tacaacatgacagtataccaagctgtacgacagtacagtcttcaagcagaagaagaaagg
gagtcgacggacgatgaggcaaacccacttgggcgagctggcatctggaccaaaacgcac
acaatatggtataagcctgtgagggaggacgaggatggcagcaaagatgctgtgggtgga
aagaggggcagagcccagactgctcccaccaaaacatcacctcgtaacgccaagaagcag
gatgagctgtggcatgatggtgtgtgtcccagcgtcatcaatcccttagagacatacctc
acttcggagccaccagagaccataacctttgatgacccatctttagaggtcaacctgctg
ctgagggtcctgcactccatcagtagatactggttctacttgtatgataatgctgtgtgt
aaggaaatcatccctaccagtgagttcattaacagtaaactgacagccaaagccaaccgt
cagctacaagaccccctggtcattatgacggggaacatccctacttggctcattgagctt
ggaaagacctgtcctttcttcttcccctttgacacccggcagatgttattctatgtaact
gcctttgatcgcgacagagccatgcagcgcctactggacacaaaccctgaaatcaaccaa
tcagattctcaggacagcagagttgcaccacgtcttgacaggaaaaagaggacgataaac
cgtgatgagctgctcaaacaggcagagtctgtaatgcaggaccttggcagctccagggca
atgttggagattcagtatgagaacgaggttggcacaggtcttggcccgactctggagttc
tatgctttggtgtctcaagagctccagcgggccgaccttggcttgtggaggggtgaagag
gtcactctggccaatcctaaaggaagccaagagggaactaagtacatgttcagctccaga
ggactgtttgccattccctttggcaggacaaccaaaccagcacacatagccaaaatcaaa
atgaagttccgtttcttaggaaagctaatggccaaagccattatggacttcagactgctg
gacctccccctggggctgccgttttataagtggatgctgcggcatgagatgtctgtaagc
tcccatgacctggtgaacattgaccccagtgtggccaagtccatccagcacctggaggat
attattcgccagaagaagaggctggagcaggaccgatcacagacaagggagaccctgcag
caggcactggagagcctgaacatgaacggctgctcagtggaggacctgggtttggacttc
accctcccaggattcccaaacattgagctgaaaaagggcggcaaagacgtcccagtaaca
atctacaacctggaggagtacctcaggttggtggtgtactggactctaaatgaaggagtg
tccagacaatttgagtcatttagggaagggtttgagtcagtcttccccttgcatcaccta
cagtatttctatccagaggagcttgaccagttgctgtgtggcagtaaatcagagacgtgg
gacgtcaagacgctgatggagtgctgtcgaccggaccatggctacacacatgacagccgt
gcagttcggttcctgtttgaggtgttgagcagctttgatgccgagcagcagagactcttc
ctgcagttcgtcacaggaagccccagactgcctgtcggaggtttccggagcctgaatccc
cccctgacgattgtgaggaagacgttcgagtcgacagagaacccggacgacttcctcccc
tcggtcatgacctgcgtcaactacctgaagctgcctgactattccagcatagagatcatg
cgagagaaactgttgattgcagctcgcgagggccagcagtctttccacctttcctga
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integrated database retrieval system
