Xiphias gladius (swordfish): 120791825
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Entry
120791825 CDS
T07311
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04142
Lysosome
xgl04144
Endocytosis
xgl05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120791825
04142 Lysosome
120791825
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120791825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120791825
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xgl04147
]
120791825
Membrane trafficking [BR:
xgl04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
120791825
Exosome [BR:
xgl04147
]
Exosomal proteins
Proteins found in most exosomes
120791825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
120791825
NCBI-ProteinID:
XP_039986502
LinkDB
All DBs
Position
LG7:9118026..9146013
Genome browser
AA seq
1684 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMADPNN
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEPTAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNTLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPMEGPLQTRLLEMNLVHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQALTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVRRKNPELWASVL
LETNNYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPPVWSQLAKAQLHKGLVKEAIDSYIKADDPSAYMEV
GQAAAQSGNWEDLVKFLQMACKKARESYVESELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDDKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPSDAWKEGQFKDIVTKVANVELYYKAIQFYLEYKPLLLNDLLIVLSPRLDHTRAVNFFS
KVKQLPLVKPYLRSVQNHNNKSVNEALNNLFIIEEDYAALRTSIDAYDNFDNISLAQGLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLAWFLQE
DKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLTKVDAIKEKVDKL
EASESLRKQEEQATESQPIVYGTPQLMLTAGPNVPVPPQQAYSYGYTAAPGYAQPPQPSF
GYGM
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatcctacctatccgcttccaggagcatctgcagctccagaacctcggaatc
aacccagccaacattggattcagtactctgaccatggagtccgacaagttcatctgtata
agggagaaagtgggtgagcaggctcaggttgtcatcatagatatggccgaccccaacaat
cccatccgcaggcccatctctgcagacagcgccatcatgaaccctgccagcaaagttatc
gcccttaaagcggcaaagaccctgcagatcttcaacattgagatgaagagcaagatgaag
gctcacacgatgaccgatgacgtgaccttctggaaatggatctccctcaacactgttgcc
ctggtcacagacaatgcggtctaccattggagcatggagggtgactctcagccagtcaaa
gtttttgaccgtcattccagcctggcaggctgccagatcatcaactaccgcaccgatgcc
aaacagaagtggctactgctcattggcatttcagcacagcaaaatcgtgttgtcggagcc
atgcagctgtactcagtggacaggaaggtgtctcagcccatcgaggggcatgccgctggc
tttgcacagttcaagatggagggcaacaccgaagagtctactctgttctgctttgctgtg
cgagggcaggcaggaggaaaactgcatatcattgaagtggggactccaccgactgggaac
cagccttttccaaagaaagctgtggatgttttctttcctccagaagcccagaatgacttc
cctgttgccatgcagatcagttcaaagcaagatgtagtctttctcatcaccaaatatggc
tacatccacctgtacgacctggagactggtacctgtatctacatgaacaggatcagtggg
gagactatttttgtcactgccccccatgagcctactgctggtatcattggcgtcaacagg
aaaggacaggtgttgtcagtgtgcgtggaggaggaaaacatcattccctacattactaat
gtgctccagaacccagaccttgctcttcgcatggctgtccgcaacaacctggctggtgct
gaggagctgttcgcccgcaagttcaacaccctctttgcagcagggaattactcagaagct
gccaaggtggcggccaatgcacccaagggtatcctgcgtaccccagacaccatccgtcgc
ttccagagcgttccagctcaaccaggccagacgtctcccttgctccagtactttggcatc
ttactggaccaaggccagcttaataagtttgagtctctggagctctgcaggcctgttctc
cagcagggccgcaagcagctacttgagaaatggctgaaagaggacaagctggagtgctct
gaggagcttggagacttagtgaagtctgtcgatcctactcttgccctcagtgtctacctc
agagccaacgtccccaataaggtcattcagtgctttgcagagactggccagttccagaag
attgtcctctatgccaagaaggtgggctacactccagactggatcttcctgctaaggaac
gtaatgcggatcagcccagagcagggacttcagttctcccagatgctggttcaggatgaa
gagccacttgctgacattacacagattgttgatgtgttcatggaatacaacctgatccag
cagtgcacatccttcctactagatgccctgaagaacaacagacccatggaaggaccgctg
cagacgcgcttgctggaaatgaatttggtccacgcaccacaggttgcagatgccatcctg
ggcaatcagatgttcacccactatgatcgtgctcatgtggcacagttgtgtgagaaagcc
ggtctcctgcagagggcgctggagcattatacagacctgtatgacattaagcgcgctgtg
gtgcacacacaccttctcaacccagagtggttggtgaatttcttcggctctttgtcagtt
gaggactctctggagtgtctgagggccatgctctcagcaaacatccgccagaacctgcag
atctgtgtgcaggtggcctccaagtaccatgagcagctcactactcaggccctcaccgaa
ctttttgagtcgttcaagagctttgagggtttgttctacttcttgggttctattgtgaac
ttcagccaggatccagaggtccacttcaaatatatccaggccgcctgcaagacaggccag
atcaaagaggtggagagaatctgcagagagagtaactgctatgatcctgaacgtgtaaag
aacttcctcaaggaagccaagctgactgaccagctgcctttgataatcgtgtgtgaccgc
tttgattttgtccatgacctggtcttgtacctgtaccgcaacagcctgcagaaatacatt
gagatctacgtgcagaaggtgaacccaagccgtctgccggtggtcattggagggttactg
gatgtagactgtgctgaggatgtgattaagaacctgatcatggtggtgagaggacagttc
tccacagatgaactggttgctgaagtggagaaaagaaatcgactgaagctgctgcttcct
tggttggaggctcgtattcatgaaggctgcgaggagcctgctacccacaatgctctggca
aagatttacatcgacagcaacaacaaccccgagcgcttcctgagggagaacccctactac
gacagccgtgtggtggggaagtactgtgagaagagagacccccacctggcctgtgtggcc
tatgaaagaggacagtgtgaccaggaattgattcacgtgtgcaatgagaactcgctgttc
aagagtctgtcccgctaccttgtacgtcgcaagaaccctgagctgtgggcgagcgtgctg
ctggagaccaacaactacagaagaccactcatcgaccaggttgtccagacagccttgtca
gagacccaggatccagaggaggtgtctgtcacagtcaaggccttcatgacggctgacctt
cccaatgagctcatcgagcttctggagaagattgtcctggataactctgtcttcagcgag
cacagaaacctccagaatctgctcatcctgacggccattaaagctgatcggacacgcgtc
atggagtacatcaaccgtctggacaactacgatgccccagacatcgctaacatcgccatc
agcaatgagctgtttgaagaggcctttgctatttttagaaaatttgatgtcaacacctct
gctgtgcaggttctgattgagcacatcggtaacctggacagggcctatgaatttgctgag
cgctgcaatgagccaccagtgtggagtcagctggcaaaggcccagcttcataagggcctt
gtaaaagaagccattgactcttacatcaaggctgatgacccatctgcttacatggaagtg
gggcaagctgcagcccaaagcggaaactgggaggacctggtgaagtttctgcagatggcc
tgcaagaaggcccgcgagtcgtatgttgaatcagagttgatctttgccctggccaagacc
aaccgcctggctgagctggaagagttcatcaatggacccaataatgctcacattcagcag
gtgggtgaccgttgctatgacgacaagatgtacgaggcagccaaactgctttacaacaac
gtgtccaacttcggccgtctggcctccactctggtccacctgggagagtaccaggcagct
gtggatggagcccgcaaggccaacagcacacgcacctggaaggaggtgtgttttgcgtgt
gtcgatggaaaggagttccgtcttgcccaaatgtgtggcctgcacattgtcgtccatgct
gatgaacttgaggaactcatcaactactaccaggaccgtggttactttgaggagctgatt
accatgctggaggccgctctcgggcttgagcgtgcgcacatgggtatgttcaccgagctg
gccatcctctactccaaattcaagccccagaagatgagggagcacctggagctcttctgg
tcccgtgtcaacattccaaaggttctcagggcagcagagcaggcccatctctgggcagag
ttggtgtttctctatgacaagtacgaggagtatgacaacgccatcatcaccatgatgaac
catccctctgatgcctggaaggagggccagttcaaagacattgtcaccaaggtggccaat
gtggagttgtactacaaagcgatccagttttatctggagtacaaaccattgttactgaac
gacctgctcatcgtcctctctccaagactggaccacactcgcgctgtcaactttttcagc
aaggtgaaacagctgccactggtgaaaccttacctaaggtctgtccagaatcacaacaac
aagtcagtgaatgaggcactcaacaacctcttcatcattgaggaagactatgcggcactg
cgtacttccatcgatgcctatgacaactttgacaacatctcactggcccagggcctggag
aagcatgagctaattgagtttaggaggatcgcagcctatcttttcaagggcaacaaccgt
tggaaacagagtgtcgagctctgcaagaaggacaagctctacaaggatgccatgcagtac
gcatcagagtccaaagacacagagttggcagaggagctcctggcttggttcctccaagaa
gacaagaaggagtgttttgccgcctgcctattcacctgctacgacctgctgcggcccgac
gtggtgctagagaccgcctggcgacacaacatcatggacttctccatgccatacttcatc
caggtcatgagggagtatctgactaaggttgatgcgataaaggaaaaggtggacaaactc
gaagcctccgagtctctgaggaaacaggaggagcaggctacagagtctcaaccaattgtt
tacggcacaccccagctcatgctcacagcagggcccaacgtgcctgtgcctccccagcag
gcctacagctacggctacacagcagcaccaggctacgcccagccgccacagcccagcttc
ggttatggcatgtga
DBGET
integrated database retrieval system
