Xiphias gladius (swordfish): 120791865
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Entry
120791865 CDS
T07311
Symbol
brip1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03440
Homologous recombination
xgl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120791865 (brip1)
03460 Fanconi anemia pathway
120791865 (brip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xgl03400
]
120791865 (brip1)
Enzymes [BR:
xgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
120791865 (brip1)
DNA repair and recombination proteins [BR:
xgl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
120791865 (brip1)
FA (Fanconi anemia) pathway
Downstream FA components
120791865 (brip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
Motif
Other DBs
NCBI-GeneID:
120791865
NCBI-ProteinID:
XP_039986586
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All DBs
Position
LG7:811083..873308
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AA seq
1262 aa
AA seq
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MATSPVEYTIGGVKIHFPCKAYPSQLAMMNSIIRGLNYGQNCLLESPTGSGKSLALLCSA
LAWQQAKFVKLQGGGSQMENKSQSDKNSEDCKKSDVITLCQCVCHSKSSRASATTAVKSA
VVDLTVSPCKEVAQQMPPAPEHIFFCIALVLLQEELQPKKQSIASRLSEKFQSSLSSDCK
KDDDFQPDRKRVRTAQHKRQKKQRLEQGVIFIDDEQELDNEPSDQSLTTEPNNPAVGLSS
LCSAPEPCSQCPCNSTKESVKEKDKDGKKKIPKIFFGTRTHKQIAQIAHELKRTVYSNVP
MTILSSRDHTCVNPDVAPHSNRNERCKDLLEAKDGRSCRYYHGVQRMRDQCTLQRVHGLH
EAWDIEDLVALGKRLRSCSYYAARELMQQASIIFCPYNYLLDPMIRESMEIDLAGQILVL
DEAHNIEDCARESASLTLDRNSLLMSRDELDGMVKNNIRCSGHESLRDFCCSLINWIQDS
QSLMCERGYETSNKVWNGKDILGIFHSLGITVDTFSILKQNLAAVLEKEECVGLANGKED
LVQIPTISSATSTVLKNLFMVMDFLYRDNCRFAEDYRIALQKSYAWMNQVPPDVTDAQGF
FVRPRRRQRQSIRVKTEVLTLSFWSLNPAVAFSDLSGSVHSIVLTSGTLSPMGSFSSELG
VKFSIQLEANHVINKSQVWVGTVGAGPQGRKLCATFQHAETYAFQDEVGALLLHVCQVVA
KGVLCFLPSYKMLDKLRDRWSNTGLWEKLEQKKTVITEPRGGGKGEFDELLQTYYGAIKY
CEEKGQTDGALLIAVCRGKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDQHC
KSRGLLPGHRWYEIQAYRALNQALGRCIRHRNDWGALILVDDRYSNNPNKYITGLSKWVR
QLVQHHDTFSNAMRSLVAFSQVQQKVEVAPADSQTPCSTSLSPDSHLPVTVEGQGLPKAS
QPQTRCSCVKLPEPQQDTSLSTFHFFSSTQLKTGQNEKAEWLKMMHGFPAEPLSHKTKTA
QPLYHGSTSSPISNCFKKAVFKEQAPSQYLEARNNFEHKENHQISSPQKKTEVSSLKQGA
TDMSSEIIVEPYDLALVPSTVTISASCESEAPSAYNPEEDEMDEDQTVFFTPELFEDEGN
EGSPQKETKIESPPRMVLGAEISALPSEELFSSEQAQRQGQASAFDGKCAISINKESTEL
SLGCKEKIRRQKQSDEEEQVDNQSRKTGSRLRRLSRSRQRRPSTPTVRLIQVTKNVIPAS
GN
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggccacatccccagtggaatacaccattggaggggttaagatccacttcccctgcaag
gcttacccatcccagctggccatgatgaattcaatcatacgagggctgaactatgggcag
aactgtttgctggagagtcccacaggaagtggaaagagcttggcgttgctctgctctgct
ctggcctggcagcaggctaagtttgttaaacttcaaggaggaggaagccaaatggagaac
aagagccagtcagataaaaactctgaagactgtaagaagtcagatgtcatcactctctgt
cagtgtgtgtgccacagcaaaagcagtagggcctcagctacaacagcagtcaaatctgct
gtcgtggacctcactgtatcaccgtgtaaagaggtggcacaacaaatgcctccagcacct
gaacatatttttttttgtattgctttagtgctgttacaagaggagttgcagcccaagaaa
cagtctatagcctctcgtctgtctgagaaattccagtcttccctcagctctgactgcaag
aaagacgacgacttccagccagacaggaaacgcgttcgcactgctcagcacaagagacag
aaaaagcagcgtctggagcagggagtgatattcatagatgatgagcaagagctggacaat
gagccttcagatcagagtttgaccacagaaccaaacaaccccgcagttggtttgtcctca
ttatgcagtgccccagaaccctgctcccagtgcccatgtaattcaaccaaagagagcgtg
aaggaaaaagacaaagatggcaaaaagaagattcctaagatcttctttggcactcgcaca
cataaacagatagctcagattgcacatgagctaaaacgcactgtttactccaatgtgcca
atgaccattttatccagcagagatcacacctgtgtcaacccagacgtggcgcctcactcc
aaccgcaatgaacgctgtaaggacctgctggaggccaaggatggcaggtcatgccgctac
taccatggggtccagaggatgcgggaccaatgcacactacaacgggtccatggactacat
gaagcctgggacattgaggacctggttgcactgggaaaaaggctccgctcatgctcttac
tacgctgcccgcgaacttatgcagcaggcctccatcatcttctgcccatataactacctg
ctggacccaatgatcagagagagtatggagatcgacctggcgggccagatcttggtgctg
gatgaagcccacaacattgaggactgtgcaagggaaagtgccagcctcacgttagaccga
aacagtctgttgatgtcaagagatgagttggatggcatggtcaaaaacaacatcagatgc
tcaggacatgaatcactcagagacttctgctgcagcctgatcaactggatccaggacagc
caaagcctgatgtgtgaaagaggatatgagacttcaaataaagtctggaatgggaaggat
atactaggcatctttcacagcctgggcatcactgtggatacttttagcattctgaagcaa
aacttggcagcagtgctggagaaggaggagtgtgttggcttggctaatggtaaagaggat
ctggtgcagatcccgaccatcagctcagctacctccactgttctcaaaaacctcttcatg
gttatggatttcctctacagggacaactgcaggtttgctgaagactaccggatagccctg
cagaagagctacgcttggatgaaccaggtcccacctgatgtcactgatgcccagggcttt
tttgtccggccacgccgcagacaacgccagagcatccgagtcaagacagaagtcttaaca
ctcagcttctggtccctcaaccccgctgtggcattctctgacttgagtgggtcggtgcac
agcattgtgctgacatcaggaaccctatcacccatgggctccttctcttctgaacttggg
gtgaagttctccatccagctagaggcaaatcatgttattaacaagtcccaggtttgggtg
ggcactgttggtgcaggaccccaaggcagaaaactctgtgctacctttcaacatgctgaa
acatatgccttccaggatgaggtgggtgccctgctgctccatgtatgccaggttgtggcc
aagggtgtgctctgctttttgccttcttacaagatgctggacaagctgcgggatcgatgg
tccaacactggtctctgggagaagctagaacaaaagaaaactgtgatcacagagccccgc
ggtggtggcaagggggagtttgacgaactgcttcagacttactacggtgccatcaaatac
tgtgaggaaaaaggtcagactgatggtgcattgctgattgctgtatgtaggggtaaagtg
agtgaaggactagacttcacagatgacaatgccagggcagtggtcaccattggaattccc
ttcccaaacatcaaagacctccaggttgaactgaagatgaagtacaatgaccagcactgc
aagtccagaggtcttctcccaggccatcgatggtacgagattcaggcctacagagctcta
aaccaggccctggggaggtgtatccgccacaggaatgactggggtgctctaatacttgtg
gatgaccgttacagtaataatcctaataagtacatcacaggtctgtcaaaatgggttcgc
cagcttgtccagcatcatgacactttcagcaatgcaatgcggtctctggtagcattctct
caagtgcagcagaaagtggaggtggcccctgcagacagccagacaccctgctctacgtcc
ttatctccagacagtcacttgccagtaactgtagagggacagggtctgcccaaggcctcg
caacctcagacacgttgctcatgtgtcaaactgcctgaaccccagcaggacacaagcctc
tcgaccttccattttttttctagtacacagttgaaaactggacaaaatgaaaaagcagaa
tggttgaagatgatgcacggtttcccagcagaaccactctctcataaaacaaaaacagct
cagcctctgtaccacggttccacctccagccccatcagcaactgcttcaagaaggcagtc
tttaaagaacaagcacccagccagtacttggaagcacgtaataattttgagcacaaggag
aaccaccagatttcctctccacagaagaagactgaggtttcttctcttaaacaaggggct
acagacatgtccagtgaaatcatagttgaaccatacgatcttgctctggtgccatctaca
gtaacgatctctgccagctgtgaaagtgaagcaccctcagcctacaatcccgaagaagat
gaaatggacgaggaccagaccgtcttctttactccagaacttttcgaggacgaaggaaac
gaaggcagcccacagaaggagacaaagatagagtcgcctccaaggatggttttaggagca
gagatctctgctctgccgtcagaagaactttttagctcagagcaggcccaaaggcagggg
caagcctctgcttttgatggaaagtgtgctatttcaatcaataaggagagcacagagctg
tcactgggatgcaaagaaaaaattagaagacagaagcaaagtgatgaggaggagcaggtg
gataaccagagcaggaagacaggcagtaggctccgaaggctgtccaggtctaggcagaga
cgtccttccactccaacagttcgtcttatacaagtgaccaagaatgttatacctgcctca
ggtaactag
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