KEGG   Xiphias gladius (swordfish): 120791884
Entry
120791884         CDS       T07311                                 
Name
(RefSeq) protein Atg16l2 isoform X1
  KO
K20868  autophagy-related protein 16-2
Organism
xgl  Xiphias gladius (swordfish)
Pathway
xgl04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    120791884
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xgl04131]
    120791884
   03029 Mitochondrial biogenesis [BR:xgl03029]
    120791884
Membrane trafficking [BR:xgl04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    120791884
 Others
  Specific organelles associated proteins
   Auto phagosome
    120791884
Mitochondrial biogenesis [BR:xgl03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    120791884
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_WDR3_2nd EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st WDR90_beta-prop_4th ATG16 Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_SCAP ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_WDR41 Beta-prop_ACSF4 Beta-prop_VPS8 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_HPS5 PALB2_WD40 Ge1_WD40 Beta-prop_NOL10_N Beta-prop_NUP159_NUP214 Beta-prop_Vps41 Chibby Cytochrom_D1 Tricorn_2nd
Other DBs
NCBI-GeneID: 120791884
NCBI-ProteinID: XP_039986629
LinkDB
Position
LG7
AA seq 609 aa
MAASRRIMTDSAGVSERSGRVPAPGGNGRSAETWKRHIVRQLKHRDLSQHAMFQDLIRFY
TQLLEKTSLAKGILSYSGRRPGSDGSSSVSSLLHQNNQLKKTTGELAYQVVELQQQIKIK
ECVLEEQHARLLEEEHRLAGAFDGRRQLQERVEQVQEENGALKLNYDALLERQRGAETRL
REEKVRGVHLLEDMIHLKQQAAARMNSRNERRSRAREANLQKDLQTAARSKVTLDSSSSA
PASRSASPKNENQDESTERRHTRLFRSASATSPRILASIKELFDRKRRIHSVCNLEEDLM
CPAGICLSARVPARALQVLEAHEQGINAVRFSSSSDLLATGGTDRVIKLWEVRAGSLTHR
ATLDGSTEGITCIEFDPTGLRILAASYDKSALLWRLDDSVPKLTLTGHSRKVTAARFSSS
LHQVVTGSADRTIRLWDLQRAACVQVVEVASYCSDLVCSENCIISGHYDCKIRVWDTRSA
SCVQELPAQGKVTSLDLSADHRQLLSCCRDDCLQLVDLRKQSNDRMCFRAEGFKCGSDST
KAVISPDGCFLAAGSADGTVYIWNVSTNNLETRLPDKHSSSISAVSWSLSGEYFVSVDKS
RRAVLWSDI
NT seq 1830 nt   +upstreamnt  +downstreamnt
atggcggcctcccgcagaatcatgacagattcagccggcgtgtcggagcggagcggccgc
gtcccggccccgggaggaaacggcaggtccgccgagacctggaagagacacatcgtccgc
cagctcaagcaccgagacctgagccagcacgccatgttccaggacctgatccgcttctac
actcagctgctggagaaaaccagtctggccaaaggaatcctgagctactctggcagacgt
cccggctctgacggcagcagctccgtctcttctctgctccaccagaacaaccagctgaag
aaaactacaggagagttggcctaccaggtggtggagctgcagcagcagataaaaatcaag
gaatgtgttctggaggagcagcatgccaggctgctggaggaggagcatcggctggcgggt
gcgtttgatggccgtcggcagctgcaggagcgggtggagcaggttcaggaggagaacggg
gctttgaagctgaactacgacgccctgctggagcgacagagaggggcggagacgagactc
agggaggagaaggtcagaggggttcacctgctggaggacatgatccacctgaaacagcag
gctgccgcccgcatgaacagccgcaacgaacgccggtccagagctcgggaagcgaacctg
cagaaggatctgcagaccgctgccaggtcaaaggtcaccttagacagctcctccagcgct
ccagcctccagatcagcgtccccaaagaacgaaaaccaggatgagtccacggagcgaaga
cacaccagactcttcagatcagcatcggctacgtccccgaggatcctcgcctccatcaaa
gaactgtttgacaggaagaggcgtatccactcagtctgcaacctggaggaggatctgatg
tgtcctgcaggaatctgtctgtcggccagagtccctgccagagctctgcaagtcctggag
gcccatgagcaaggcatcaacgctgtgaggttcagctccagctcagacctgttggccacc
ggaggaacggaccgagtcatcaaactgtgggaggtcagagcaggctcgctgacccacaga
gcgacgctggacggcagcaccgaggggatcacctgcatcgagttcgacccgacgggtttg
aggatcctcgcggcgtcctacgataagtcggccttgttgtggcggctggatgactccgtt
cccaagttgactctgacaggtcacagcaggaaggtaacggcagcgaggttcagcagttcc
cttcatcaggtggtgacaggaagtgcagacagaaccatcagactgtgggacctgcagaga
gctgcctgtgtgcaggtagttgaagtggcgtcgtactgcagcgacctggtctgctccgag
aactgcatcatcagtggacactacgactgtaagatcagggtctgggacaccaggtcggcg
agctgcgttcaggagcttcctgctcagggtaaagtcacatcactggacctcagcgccgac
catcgtcagctgctcagctgttgccgtgacgactgcctccagctggtggacctgaggaag
cagagcaacgaccgcatgtgcttcagggccgagggctttaaatgcggcagcgacagcacc
aaggctgtgatcagtccagacggttgttttctggcggcgggatcagcagacggcaccgtt
tacatctggaacgtctccaccaacaacctggagacccgcctaccggacaaacacagttcg
tccatcagcgccgtgtcctggtctttgtccggtgagtactttgtcagcgtggacaagagt
aggcgggccgtcctctggagcgacatctga

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