Xiphias gladius (swordfish): 120791989
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Entry
120791989 CDS
T07311
Symbol
supt5h
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120791989 (supt5h)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xgl03021
]
120791989 (supt5h)
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120791989 (supt5h)
Transcription machinery [BR:
xgl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
120791989 (supt5h)
RNA polymerase I system
120791989 (supt5h)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
120791989 (supt5h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW4_SPT5
KOW
KOW2_Spt5
KOW5_SPT5
KOW7_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF150_C
DUF3912
Ribonuc_P_40
DUF6406
Motif
Other DBs
NCBI-GeneID:
120791989
NCBI-ProteinID:
XP_039986885
LinkDB
All DBs
Position
LG7:27940867..27967436
Genome browser
AA seq
1083 aa
AA seq
DB search
MSDSEDSDFSDNQSERSSDGEAEEVEENEEETGSPVGSDKVAEEEGEDLEDEEEYDEEEE
EDDDDRPRKKPRHGGFILDEADVDDEYEDEEDQWEEGAEDILEKVNEEAEVSNMDHVVLD
EDHSGSRRLQNLWRDSREEALGEYYMRKYAKSSAGEHYSGGSEELSDDITQQQLLPGVKD
PNLWTVKCKIGEERATAIALMRKFIAYQFTDTPLQIKSVVAPDHVKGYIYVESYKQTHVK
AAIEGIGNLRMGFWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGLYKDDIAQVDYV
EPSQNTISLKMIPRIDLDRIKAKMSLKDWFAKRKKFKRPAQRLFDAEKIRSLGGEVSHDG
DFMIFEGNRYSRKGFLFKSFAMSAVITDGVKPTLSELEKFEDQPEGIDLEVVTESGKERE
HNLQAGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDPLEFPAHELRKYFRMGDH
VKVIAGRYEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDAGGQHEWG
ELVQLDPQTVGVIVRLERETFQVLNMHGKVLTVRHQAVNRRKDNRFAVALDSEQNNIHVK
DIVKVIDGPHSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNF
TVGGFAPMSPRISSPMHHGGGGAQQRGGGGGGMGRGRGRRDNELIGQTVRISQGPYKGYI
GVVKDATESTARVELHSTCQTISVDRQRLTTMGAKRHSGMTSTHGRTPMYGSQTPMYVTG
SRTPMYGSQTPLHDGSRTPHYGSQTPLHDGSRTPGQSGAWDPNNPNTPSRNEEEYDFGYD
DEPSPSPQGYGGTPNPQTPGYPEVPSPQVNPQYNPQTPGTPAMYNTEQYSPYAALSPQGS
YQPSPSPQSYHQVVPSPVGSQNMHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPG
GYNPHTPGSNIEQGSSDWVTTDILVRVKDSFMDLMGQTGVIRSITGGMCSVFMQESEKVV
SISSDHLEPITPTKNNKVKVILGEDREATGILLSIDGDDGIVRMELDDQLKILNLRFLGR
LEH
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagcgaggacagcgacttctccgacaaccagagtgaacgcagcagcgacgga
gaggccgaggaggtggaggaaaatgaggaggagacaggcagccctgtgggcagcgataag
gtagccgaggaagagggggaggacctggaggatgaggaagaatatgatgaagaggaggag
gaggacgatgatgaccgtcccaggaagaagccgagacacggagggttcatcctggatgaa
gccgatgtggatgatgagtacgaggatgaggaggatcagtgggaggaaggagctgaagat
attttggagaaagttaacgaggaggctgaggtgtctaatatggaccacgtggttttggac
gaggatcactctgggtccagaaggctgcagaacctctggagagactccagagaggaggca
ctaggggaatactacatgaggaagtatgccaagtcttcagcaggcgagcattactctgga
gggtcagaggagctgtctgacgacatcacccagcagcagctacttcctggggtcaaggat
ccaaatctgtggacggtgaagtgcaagattggagaggagagggcgacagccatcgcattg
atgagaaagttcattgcctaccagttcaccgacacaccgctgcagatcaagtctgtggtc
gccccggatcacgttaaaggctacatctacgtggagtcgtacaagcagacgcacgtcaag
gcggccatcgagggcatcggcaacctgaggatgggcttctggaaccagcagatggtcccc
atcaaagagatgacggacgtcctcaaggtcgtcaaagaggtcacaaacctgaagcccaag
tcctgggtcagactgaagagaggcttgtacaaggacgacattgctcaggtggactatgtg
gagccgagtcaaaacaccatctccctgaagatgatccctcgaatagacctggaccgtatc
aaagccaagatgagtctgaaagactggttcgccaagaggaagaagttcaagagacctgct
cagaggctgtttgatgctgaaaagatcaggtccctgggcggggaggtcagccatgatgga
gacttcatgatctttgaggggaaccgttacagccgcaaaggattcctgtttaagagcttt
gccatgtctgctgtgatcacagacggagtgaagcccactctgtcagagctggagaagttt
gaagaccagcctgaaggaatcgacctggaggtggtcacagagtcaggtaaggagcgtgaa
cacaacctgcaggccggtgacaacgtggaggtgtgtgagggagagttgatcaacctgcag
ggaaaaatccttagtgtggatggcaacaagatcaccatcatgcccaaacacgaagacctg
aaggaccccctggagttcccagctcatgagttaagaaaatatttccggatgggtgaccac
gtgaaggtgatcgctgggcgatatgagggagacaccggcctcatcgtcagagtggaggag
aactttgtcatcctcttctccgacctcaccatgcacgagttgaaggtattgcccagagat
ctgcagctttgctcagagacagcgtctggcgtagatgcaggagggcagcatgagtggggg
gagcttgttcagctggacccacagaccgtcggagtcatcgtccgactggagagagagaca
ttccaggtgttgaacatgcacgggaaggtgctgacggtgcgtcaccaggcggtgaaccgc
aggaaggacaatcgctttgctgtggcgctggactcggagcagaacaacatccatgtcaag
gatatcgtgaaggtcatcgatgggccgcactccggccgcgaaggtgagattcgacacctg
ttcagaggctttgccttcctccactgcaagaagctggtggagaatggaggcatgttcgtc
tgcaagaccagacacctggtgttagctggtggatccaagcccagagacgtgaccaacttc
actgtgggagggtttgctccaatgagccctcgcatcagtagccccatgcaccacggcgga
ggaggtgctcagcagagaggaggaggtggaggaggaatggggcggggccgaggacgaaga
gacaacgagcttattggtcagacagtccgcatctcccagggtccttacaaagggtatatc
ggtgtggtgaaggatgcgacagaatctacagccagagttgagctgcactccacctgtcag
accatctctgtagacagacagcgcttaactaccatgggagctaagagacacagtggaatg
acctccacccatggacggactccaatgtatggctcacagacacccatgtatgttaccggc
tccagaacgcctatgtacggctctcagacgccgctgcatgatggaagccgtacgcctcat
tacggctctcagaccccgctgcatgatgggagcaggacgccgggtcagagcggagcctgg
gaccccaacaaccccaacacaccttccagaaatgaggaagagtacgatttcggctacgat
gacgagccctcgccgtcccctcagggatatgggggaacccccaacccccagaccccgggt
tacccagaggtcccctctccacaggtcaaccctcagtacaaccctcagacacctggcacg
cctgctatgtacaacacagagcagtattctccttatgcggccctgtcccctcagggctcc
tatcagcccagtcccagtcctcagagctaccaccaggtggtgccctcaccggtcggctct
cagaacatgcactctccagccagctaccatccgacgccttcccccatggcttatcaggcc
agtcctagccccagtcctgtgggctacagtcccatgacgcccggagcaccctctcctgga
ggctacaaccctcacaccccgggctccaatatagagcagggcagcagcgactgggtgacc
accgacatcctggtccgagtgaaggactcctttatggacctgatgggacagaccggggtc
atcaggagcatcacgggagggatgtgttcagtgttcatgcaggagtcagagaaggtggtc
agcatcagcagcgatcacctggagcccatcactcccaccaagaacaacaaggtgaaggtg
attctgggagaggaccgcgaggcgacggggatcctgttgagcatcgacggagacgatggc
atcgtccgcatggagctggacgaccagctgaagatcctcaacctgaggttcctgggacgc
ctggagcactga
DBGET
integrated database retrieval system
