Xiphias gladius (swordfish): 120792235
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Entry
120792235 CDS
T07311
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04517
IgSF CAM signaling
xgl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120792235
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120792235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xgl04812
]
120792235
Cytoskeleton proteins [BR:
xgl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120792235
Intermediate filaments
Intermediate filament-binding proteins
120792235
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
Helical_needle
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
120792235
NCBI-ProteinID:
XP_039987242
LinkDB
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Position
LG7
Genome browser
AA seq
2701 aa
AA seq
DB search
MANASPDLDNAEAQRQLNNNNRPISSGFWETECTSSKLFECSRIKALADERDAVQKKTFT
KWVNSHLARVSCRISDLYNDLRDGYMLTRLLEVLSGELLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIETEDNRETRSAKDALLL
WCQMKTAGYPEVNIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLTRSNATHNLQQAFNIA
EQHLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRVGKVLDNCIEAE
KIINRYEALASDLLEWIEKTIAVISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYVPHDGKLISDINKAWERLEKAEHERGVALRKELIRQEKLE
LLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADIASYEERIGVV
VELASEMEAEGYYDIRRILARKENILGQWGLLKELVAGRRTRLEKNLALQKTFQDMVYMI
DWMEDTQVQLLSKDFGKHLLEVDDLLQKHSLQEADIAVQAERVETLNTSALKFTTIEGYQ
PCDPQVICNRVNHVSSCLEELKQLAAKRHAELEESRQLWAFFQELEESEAWIREKSSILG
AQSYGKDLSSVLRLLQKHKTLAGELLAHRSLLQNTMKRGKQILSEKSFGTAGIQERIMEV
KSEWKQLEDHAAQRLGHLQEALNFFQFSTETDDLVAWLQDAYRLVSSEDFGHDEYSTQSL
LKKHRGVSEAIDKHRLHVVSLHKHMVALPLQYREQEEVQVRMGEVEQLYTEVAEVAVLRQ
QWLHDALAVYRMFSEVNACELWIDEKEQWLDKMEIPERLEDVEVVAHRFESLDQEMNSLM
GRILDVNQIVQQLLDGGHPSSTEVRGCQDHLNSRWNSIVELVEQKKDQLDSMLRLQNYLL
ECAEIKSQIQDKRKAIDATQYVGSDLGGVLALQRRLSTMEGALSVLEPKLLHLQEEAEHL
ATVHPDRAMEVLVPFDGISVEWEELKRTLQGCEDSLMVASRLQSFIQDLDSFLTWLVQTQ
TAAASDQLPNDLEEAERLINKHAALKEEIGRYEEDYERLQAMNELLESEEAPLPQAALQQ
WLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAESFLNNQESALAHVELPTTVE
TVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQSNIYSERIRERVNTLANRGNQNRE
LAQQWLEKLNDQWELQRFLQDCHELGDWVCEKMLMARDSSRDETQKLHKKWLKHQAFMAE
LAQNKEWLDKIEKEGQQLIQEKPELSPVVRKKLEEIRECWQDLESTTQAKARQLFEANKA
DLLVQSYESLDQRLGQLEGQLAYVDQGQDLTTVNKQLKKLQTLETQMEDWYKEVGQLQVQ
AASIPQQTQIKETVAERQAAVEARMVRLIEPLKERRRILLASKEVHQVGRDLEDEILWVQ
ERLPMATSQEHGSTLQAVQQLMKKNQTLQRELQGHRSRIDDVLDRAGIIASIRSPEADCV
RAGHDQLAQLWAVLWAETERRQLVLDAMYQAQQYYFDMAEVEAWLSEQELHMMNEEKGKD
EPSTLQLLKKHLILEQTIEDYAETIGLLSQQCRQLLELGHPDCEQISKRQSQIDRLYVSL
KDLVEERKSRLEQQYWLYQLNREVDELEQWIAQREVVASSPELGQDFEHVTVLQEKFTEF
ASETGSVGQERVTAINQMVDELIDYGHSEAATIAEWKDGVNEAWADLLELMETRAQMLAA
SHQLHKFFSDCREVLAQIEDKHRRLPEVRARQGSTSNTSSLQRLLHSFEQDIQLLVTQVR
QLQESAAQLRTVYAGEKAETIACHEHEVMQNWKELLTSCEECRVQITTETDKLRFFGMVR
DQIMWMDSIICQIGTGEKPRDVSSVEVLMNYHQSLKSEVEARSRSTLECIEMGKTLLAVR
NPAAEEIKEKLDKVIAKEHELSEKWDKHWEFLQQLLEVHQFAQEAVVAEAWLTAQEPFIN
SCELGGSVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKLKAEQSKLPPTPLLGRK
VFLDPQDASPSPSTLPRLPISPVMKQTIYEQNEVSSPPSPSPATPTPSPSSVVRRLGSTV
ANYTPVMNGSSYRHTLEARHGSVVGMAAGLGQPAPSSIASIATAAMLVSANQVRESVSTA
RDQATKAMNHLQPVQAARELEVKSSPYLRQPKIKHMDDAVTPLIIASRLEKVRERGRERE
MMMGEIGTERAEVAVMAEVVLQEPSRERVHSEPTRGPRGSRTDPLGHAEPQVQTHTYHRD
QKIERQLSSEQLIQARRDELPQEVWREQAERRERRTLERQTSSEQEGHGGHEGRRRERDR
HRMERQESSEHDTGKEHSDRRSGGGEKRSTLAEIVEQLQEREAAQARGEVPRLPNGLPEK
SSRPDRPRARDRPKPRRRPRPKEPGDPTRRSRSAPAQSSPAVPQPPTHTAHHEGFLFRKL
DIESLKKSTNSRSWVNLYCVLNKGEMGFYKDAKNTTTPYNNEPLLNLSHCHCDVTNGYKK
KKNVFTLKTKDGSEFLFHAKDEEDLKTWVNNITASISEHEEIAKWGQPQPTTSSTDEGTR
RDGSKADNRSERGGERSDRAERIERAEKEREKERERGDRSERSDRGGKSDVKRSEKSGKK
K
NT seq
8106 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcctccccagacctggacaatgcggaagcccagcgccagctcaacaacaac
aaccgaccaatcagctctgggttctgggagacagagtgtaccagctccaagctgttcgag
tgctcccgcatcaaggccctggcagatgaacgagatgcggtgcagaagaagacttttacc
aagtgggttaactctcatctggccagagtgtcctgtcgcatatctgacctctacaacgac
ctgagagatggatacatgctcaccagactgctagaggtcctcagcggagagctgctgccg
aggcctactaggggtcgtatgcggatccactgtctggaaaacgttgacaaagccctgcag
ttccttaaagaacagagggttcacctggaaaatgttggttcccatgacattgtggatgga
aaccaccgcctcaccctgggccttatctggaccatcattctacgcttccagatccaggtg
atcaaaatagagacagaggacaacagagaaactcgttctgccaaggatgccctgctgctc
tggtgccagatgaagaccgcaggataccctgaggtgaacatccagaacttcaccacctgc
tggagagatggacttgccttcaatgccctcatacacagacacagacctgacctgatagag
ttccacaagctaacgcggtccaatgcaacccataacctccagcaagccttcaacattgct
gagcagcacctgggcctcaccaaacttctggaccctgaggatgtgaacacagagaaccca
gatgagaagtccatcatcacctatgtggtctcctattaccactacttctccaagatgaag
gctcttattgtggagggcaagagggttggcaaggtactagacaactgtattgaggcagag
aaaatcatcaaccgctacgaggctctggcgtcagacctgctggagtggatcgaaaagacc
atcgcggtcatcagcaaccagaagttcgccaactcactgactggagttcagcagcagcta
caggccttcacaacctactgcaccatagagaagccaatcaagtttcaggagaaggggaat
ctcgaggtccttctcttcaccatccaaagcaaactcagagccaacaaccagaaaccctat
gtgcctcatgatgggaagctcatctcagacatcaacaaggcctgggagaggctggagaag
gcggagcatgagagaggcgtggcgctgcgcaaggagctgattcgtcaggagaagctggaa
ttgctggctcagcgctttgaccacaaaacaaccatgagacaagcctggctcaatgaaaac
cagagacttgtatcacaggacaattttggctatgacctaccagcagtcgaggcagcaatg
aagaaacatgaggccatcgaggcggacatagcctcgtatgaggagcgaattggagtggtg
gtggaacttgcatccgagatggaggcggaaggatactatgacatccggcgtatcttagca
cgtaaggagaacatcctggggcaatggggtctgctgaaggagctggtggcagggaggagg
actcgcctggagaagaacctggccctgcagaagacttttcaggacatggtctacatgatc
gactggatggaggacacacaggtccagctgctgtcgaaggactttgggaagcatcttctg
gaggtggacgacctgctgcagaaacacagcctgcaggaagctgacattgctgtgcaggct
gagagggtcgagacactcaacacatctgcactcaaattcaccacgatagagggttaccaa
ccatgtgacccacaggtgatctgtaaccgtgtcaaccacgtctcttcctgtctggaggag
ctgaaacaactggcagctaaaaggcatgctgagcttgaggagtcgagacaactgtgggcc
ttttttcaggagctcgaggagtcggaggcctggatcagggagaagagctccatcctggga
gctcagagttatgggaaggaccttagcagtgtgctgaggttactccaaaaacacaagact
ctggctggagaactgctggctcaccggtcgctgctacagaacaccatgaagcgaggcaag
cagatcctgagcgagaagagctttggcactgcggggatccaggaacgaatcatggaggtg
aagagcgaatggaagcaactggaggaccatgcagcacagcgtctcggccacctgcaggag
gcactcaacttttttcagttctccacggagacagacgacttggtggcctggctgcaggat
gcttaccgcctggtctccagcgaagactttggacatgacgagtactctactcaatcactg
ctcaagaaacacagaggggtcagcgaggccattgacaaacatcgtctacatgtggtgtcg
ctgcacaaacacatggtggcgctgcctctgcagtaccgtgaacaggaggaggtgcaggtt
cgtatgggagaggtggagcagctgtataccgaggttgcagaggtggcggtgctcagacag
cagtggcttcatgacgccctcgctgtctaccgcatgttcagtgaggtcaatgcctgcgag
ctgtggatcgacgagaaggagcagtggctggacaagatggagatccccgagagactggag
gacgtggaggtggtggcacacaggtttgagagtctggaccaggaaatgaacagccttatg
ggaaggatcctggatgttaatcaaatagttcagcagctcctggatggaggtcatccgtct
tctacagaggtcagaggttgtcaggaccatcttaactccaggtggaacagtattgtggag
ctggttgagcagaagaaagatcagttggactcgatgttacgcctgcagaactacctgctg
gagtgtgccgaaatcaagtcccagatacaggacaagagaaaagccattgacgccacccag
tacgtgggcagtgatctgggaggcgtcctggctctgcagagacgcctttccaccatggag
ggagccctgtctgtcctggagcccaaactactgcatctgcaggaggaggcagagcatctg
gccacagttcacccggatcgggccatggaggttcttgtgccgtttgatggcatcagtgtg
gaatgggaggagctgaaacgcaccctgcagggctgtgaggactcgctgatggtggccagc
aggctgcagagcttcatacaggacctggactcgttcctcacctggttggtccagacccag
acggctgctgcctcagaccagctgccgaacgacttggaggaggccgagagacttatcaac
aaacatgctgccctcaaggaggagataggacggtatgaagaggactacgagcgcctgcag
gccatgaacgagctgctggagtccgaggaggctcctctaccccaggccgccctgcagcag
tggctccagaagctcgatgtcggctggaataaattgctggagatgtgggagagcaggaga
gaagttctggtgcaggctcacattttccatctgttcctgcgagatgttaaacaggcggag
tccttcctcaataatcaggaatcagcccttgctcacgtagagctgcccaccacggtggaa
acagtcgaagccgccataaagaaacacaaggatttcaccaccaccatggagctgaacctg
cacaggatcaaagctgtgattgaggctggagagagtctgatcagccagagcaacatctac
tctgaacgcatcagggaacgcgtcaacaccctcgccaacaggggaaaccagaacagggag
ctggcccagcagtggctggaaaaactgaatgaccagtgggaacttcagaggtttctccag
gactgtcatgagcttggggactgggtgtgtgagaagatgctgatggcgagggacagcagc
cgagacgagacccagaagcttcataagaaatggctgaagcaccaggccttcatggccgag
ttggcccagaataaggaatggctggacaaaattgaaaaggagggccagcagctgatccag
gagaagccggaactcagccctgtggtccggaagaagctggaggagatcagggagtgctgg
caggatctggagagcaccactcaggccaaagcccgccagctctttgaggccaacaaggcc
gacctgctggtgcagagctacgaaagcctggaccagagactgggccagctggagggtcaa
ctggcctacgtggaccaaggacaagacctcaccactgtcaacaagcagctcaaaaaacta
cagactttggagacacagatggaggattggtataaggaggtggggcagctccaggtgcag
gcagcctccatccctcagcagacacaaatcaaggagacggttgcagagcgtcaggccgct
gtggaggccaggatggtgcgtctaatcgagccgctgaaagagagacgacgcatcctgctg
gcgtctaaggaagtccaccaagtcggacgagacctggaggatgaaattttgtgggtccag
gagcgcctcccgatggccacatctcaggagcatggctccactttgcaggcagtccagcag
ctcatgaagaagaatcagacacttcagagagagctgcagggccacaggagcaggatcgat
gacgtcctggacagggcagggatcatcgcctccatacgcagccccgaggccgactgtgtc
agggctggccacgaccagctggcccagctgtgggctgtgctctgggctgaaaccgagagg
aggcaactggtcctggatgccatgtaccaggcccagcagtactactttgacatggccgaa
gtggaggcctggctgagtgagcaggagctgcacatgatgaacgaggagaaggggaaggat
gagccgagtacactgcagctgctgaagaagcacttgatcctggaacagaccatcgaggac
tatgctgagaccatcggcctgctatcacagcagtgtcgacagctgctggagttggggcat
ccagactgcgagcagatcagcaagcgccagtcacagatcgaccgtctgtacgtctctctg
aaggacctggtggaggagaggaagagccgtctggagcagcagtactggctctaccagctc
aacagagaggtggacgagctggagcagtggattgctcagagggaggtggttgccagctcg
cccgaactgggtcaagactttgagcatgtgacagtcctgcaggagaagttcacagagttt
gcatcagagacgggcagtgtggggcaggaacgagtgacagccatcaaccagatggtggac
gagctcatcgactacggccactcagaggccgctactatcgcagaatggaaggacggggtg
aatgaggcctgggccgacctactggagctcatggagacccgggcgcagatgcttgccgcc
tcacaccaactgcacaagttcttctccgactgcagagaggttttggctcagattgaggac
aaacatcgaagactgccagaagttcgggctcgacagggcagcacttccaacaccagctcc
ctgcagagactcctgcacagcttcgaacaggacatacagctgctggtcacgcaggtgcgc
cagctacaggagagcgcggcccagctgaggacggtgtatgccggcgagaaggccgaaacc
attgcatgccacgagcatgaagtgatgcagaactggaaagagctgctgacgtcctgtgag
gagtgtcgagtgcaaatcaccaccgagacagacaagctcaggttctttggcatggtccga
gatcagatcatgtggatggactcgatcatctgtcagataggaacaggagagaagcccagg
gacgtgtcctcagtagaggtactgatgaattatcaccagagtctgaagagcgaagtggag
gctcgcagccggagcacactggagtgtatcgagatgggaaagaccctgctggctgtgaga
aaccctgcggctgaagagatcaaggagaagctggacaaggtgattgctaaggaacatgag
ctgtctgagaagtgggacaaacactgggagttcttacagcaattgttggaggttcaccag
ttcgcccaggaggcggtggtggcagaggcgtggctgactgctcaggagccgttcatcaac
agctgcgagcttggcgggagtgtagacgaggtggagcagctgattcgtcgacatgaagcc
ttccgcaaagctgccgccacgtgggaggagcgattcagctcactgcgacgactcaccacg
gttgaaaagttgaaagcagagcaaagtaaactacccccaacccctctactgggtcgtaaa
gtcttcctggacccccaagatgcctcacccagtccatcaaccctcccccgcctcccaatc
tctcccgttatgaaacagacaatctatgaacagaacgaagtcagctctcctccctcgccc
tcgcctgccacccctacaccctctccttcttctgtggttcgtcggctggggtcgacagtc
gccaactacacccctgtgatgaatggctccagctaccgccacaccctggaggcacggcat
ggcagcgtggtgggcatggccgcaggactaggccagcccgcaccttcttcgatcgcatct
attgccacggcggccatgctagtctcagccaaccaggtacgagaaagcgtcagcacggca
agagaccaggcgacaaaggcgatgaatcacctccagccagtgcaggctgcaagggaactg
gaggtgaaatcatccccgtatctaaggcaacccaaaatcaaacacatggatgacgcagtg
acacctctgatcatagccagtcggctggagaaggtgagagagagggggagggagagagag
atgatgatgggagagatagggactgagagagcagaggtggcggtgatggccgaggtggtg
ctccaggagccgagtcgggagcgtgtacacagtgaacccaccagagggcctcggggttcc
aggactgacccattgggccatgctgagccccaggtccagacacacacttaccacagagac
caaaagatagaacggcagctgtccagtgagcagctgatccaagcacgtagggacgagctg
cctcaggaggtgtggagggaacaggccgagaggcgggagagacggacgctggagagacaa
acgtcaagcgagcaggaaggccatgggggccatgagggccggcggagagagagggaccga
catcggatggagagacaggaatccagtgagcatgataccggaaaggagcactcagacaga
cgctcaggaggaggggaaaagagatccaccctggcagaaattgtagagcagctgcaggaa
agagaagcagcacaggcccgtggtgaggtgccccgcctccccaacgggttaccagagaag
tcttcccgtcctgaccggcctcgagctcgggacagacccaaaccacggcgacgaccgcga
cccaaagagccaggagatccgacgcgccggtccaggtctgctccggctcaaagtagcccg
gcagtcccccagccaccaacacacaccgcacaccatgagggcttccttttccgcaaactg
gacatcgagagtctgaagaagagcaccaacagcaggtcatgggtcaacttgtattgcgtg
ctgaacaaaggtgagatgggtttctacaaggacgccaagaacaccaccacgccctacaac
aacgagccgctgctcaacctctcccactgccactgtgacgtcaccaacggctacaagaag
aagaagaacgtcttcacgctcaaaacaaaggacggcagcgagtttttgtttcatgctaaa
gatgaggaggacctcaaaacgtgggtaaacaacatcaccgccagtatttcggagcacgag
gagattgccaaatggggtcagccccaaccaactacctcatccaccgacgagggtacgcgc
cgcgatggcagcaaggcggacaacaggtcagagcgaggtggagagcgctcggaccgggcc
gagcggatcgagcgggcagaaaaagaaagggagaaagagagggagagaggcgatcggtcg
gagaggtcagatcggggcgggaagtcggacgtgaagcgctcggaaaagtccggtaagaaa
aagtga
DBGET
integrated database retrieval system
