Xiphias gladius (swordfish): 120792277
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Entry
120792277 CDS
T07311
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120792277 (npas1)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
120792277 (npas1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
SAGA-Tad1
Motif
Other DBs
NCBI-GeneID:
120792277
NCBI-ProteinID:
XP_039987287
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Position
LG7:complement(16357739..16384292)
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AA seq
813 aa
AA seq
DB search
MATMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASVIRLTISYLHMRTFASQGDPPWSPLLEGDSNCSKVRRSSHSLA
TDMFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIRPHLRAEAGCHTAPESASSSASTSSLAGTPEPAPSSPHSPADDPPDRGFF
IRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPALVPGSTRSVRRPMGLVALAHTLPPSTL
NEVRMESHMFVFRVNMDLQVTYCENRISEYMDLTPAEVVGHTCYHFIHVEDLENLRQSHE
DLLRKGQVVTGYYRWLQRRGGYLWIQSTATVSINHKAPHERNVIWVNYVLSRTELPDTPL
DLLQLPESIRAERLRVSSSPNDGSPQARGSSGSQPVKGSVGKSDPDTKGREKFTAAAIQS
EDRRKRLLRSDPEGAPPETRRRLEELRHAEESVSASSDLASESEGEEEEETEWDQGGDSE
RLKQEDGEGGGKQSRGGDTPTRGERGRRAHNGRAVIQQLKSVVTPSPLSSSPSIKTEHDS
LSTGGRWGSHTQTSTSHTTQHQPSHAHTPSSSLNGDSPNTPIPDSSSSSEAPPKGLFTPP
SPALSPAMSVSSPLPREERAVSGVVSRGSGGGVGSGPDFELLQRLAAGGAAGRVLFHPLA
LGPQGPQSLYAPSTIRYAPPELPPSHHHSTGHSDGLQLRSDHHKGPPPAFFPHLQRLAGL
PPFSGFSPSDSPFSSGLPFCMNGLRGAAGSEED
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccatgccgtttgtcagcgaggggaagtgtgtgagtgtggagtgggatttccta
caaggactactggccaagcctcccaccctgccctgtctccagaacctgcgtaaagagaag
tctcgcaatgcggctcgttcacggcgggggaaggagaatttcgagttctttgagctggct
aagatgctgcctctgcccggggccatcaccagccagctggacaaagcctccgtcatccgg
ctgaccatcagctacctgcacatgcgcacctttgccagccagggggacccgccctggagc
cctctgctggagggcgacagcaactgcagcaaagtaagacgatcatctcattctctggct
actgacatgtttgagcagcacctaggggcgcacctcctgcagtctctggatggctttgtg
tttgtggtcagtcaggagggacggttcctctacatctcagagacagtttctatctatctg
ggactctcgcaggtggagctgaccggcagcagtgtgttcgactatatccacccggcggac
catgtcgagatggccgagcggctgggaatcaggccacatctgagggccgaagccggctgc
cacacggcccctgagagcgcttctagctctgcatccacctcctccctggctggtacccct
gagcctgctccgtctagtcctcattctcctgctgacgaccctcctgaccgtggcttcttc
atccgcatgaaatccacgctcaccaaaagaggcctgcatgtcaagtcttctggatacaag
gtaatccatgtgacagggcgaatccgctgccgcccagcacttgtgccgggctccacgcgt
tcagtgcgtcgaccgatgggtttggtggcactggcgcacacgctcccgccttccacgctt
aatgaagtccgcatggagagccacatgtttgtctttcgagtaaacatggacctacaggtc
acatattgtgagaacaggatctcagagtatatggatctgaccccagcagaggtggtggga
catacctgttaccacttcatccatgtagaagacctggaaaaccttcggcaaagccacgag
gacttgctgaggaaaggccaggtagtgacaggttactatcgttggctccagaggagagga
ggatacctgtggatccagtccactgccactgtctccatcaaccacaaagccccccacgaa
cgcaacgtcatctgggtcaactatgtcctgagtcgaacagagttgcccgacactcccctg
gatttactgcagctaccagagagcataagagcagagagacttcgagttagctcctcaccc
aacgacggctccccacaggcccgaggctcctcaggctcgcaaccagtgaagggctcagtg
gggaagagtgaccctgacactaaaggcagagagaaattcactgccgctgctatccaatcg
gaggacaggaggaagcgcctgctgaggtccgaccccgagggtgctcctcccgaaacccgt
cgcagactagaggaactccgtcacgctgaggagagtgtgtcggcctcctcggacctggca
agcgaaagtgagggggaggaggaggaagaaacagagtgggaccaggggggagacagtgaa
agactgaaacaggaagacggggagggaggaggcaaacagagtaggggaggagacaccccg
actagaggggagagaggaaggagggcgcacaacggccgggctgtgatccagcagctgaag
agtgtagtgaccccgtctcccctgtcgagcagccccagcatcaagactgaacatgactcc
ctgtccaccggggggcgctgggggtcacacacacaaacctccacctcacacaccacccag
caccaaccctcacatgcacacacaccctccagcagtctcaacggtgacagccctaacacc
ccgatccccgactcttcttccagcagtgaagcccctccgaaaggtttgttcactccccca
tcccctgctttgtcccccgccatgtccgtgtcctctccactgccccgtgaggagagggct
gtgtcaggggtggtcagtcggggcagtggtggcggtgtaggtagtggtcctgactttgag
ctgctccagagactggctgcaggtggcgctgcagggcgggtcctcttccacccccttgct
ctcggtcctcagggccctcagagcctctacgcccccagcactatccgctacgctccacct
gagctgcctccgtcccatcaccacagcacgggacacagcgacggcctgcagctacgctcg
gaccaccacaagggacccccgccggccttcttcccccacctacagcggctggccggcctg
ccacccttcagcggtttctccccgtctgacagccctttctcctccggcctgcccttctgt
atgaatggactgaggggggctgcaggctcagaggaagactga
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