Xiphias gladius (swordfish): 120792313
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Entry
120792313 CDS
T07311
Symbol
cul3b
Name
(RefSeq) cullin-3b
KO
K03869
cullin 3
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04120
Ubiquitin mediated proteolysis
xgl04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120792313 (cul3b)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120792313 (cul3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120792313 (cul3b)
03400 DNA repair and recombination proteins [BR:
xgl03400
]
120792313 (cul3b)
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Cullin
120792313 (cul3b)
DNA repair and recombination proteins [BR:
xgl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
120792313 (cul3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_AB
Cullin_Nedd8
DUF6655
Stu2_CTS
Motif
Other DBs
NCBI-GeneID:
120792313
NCBI-ProteinID:
XP_039987349
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All DBs
Position
LG7:complement(11799833..11815309)
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AA seq
767 aa
AA seq
DB search
MSNLSKGGTKKDTKMRIRAFPMTMDEKYVNNIWDLLKNAIQEIQRKNNSGLSFEELYRNA
YTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRD
ILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRG
AIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARI
NEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTDDLACMYK
LFSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFN
NDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRF
MQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISN
TTMDEFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPSPRHAFEVFRRFYLG
KHSGRQLTLQHHMGSADLNATFYGPIKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTI
LMLFNNRDKSTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHVFTV
NDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNV
LVAEVTQQLRARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatctcagcaaaggcggcaccaagaaggacaccaaaatgaggatacgggccttt
cctatgacgatggatgagaagtacgtcaacaatatctgggaccttctgaagaatgccatc
caggagatacagaggaagaataacagtggcctgagttttgaggaactatacaggaatgcc
tacacgatggtgctccacaaacatggagagaagctgtacacaggcctgcgggaggtcgtc
actgaacaccttatcaacaaagtacgagaagatgtcttgaactccctaaacaataacttc
ctccaaaccctaaatcaggcctggaatgaccatcagacagcgatggtgatgatcagagac
atcctgatgtatatggacagggtgtacgtacagcagaacaatgtagagaatgtctacaac
ctgggtcttatcatctttagggatcaggtggttcgctatggctgcatcagagaccacctc
cgacagaccctgctggacatgatcgcacgcgagaggaagggggaggtggtggacaggggg
gccattagaaatgcctgccaaatgttaatgatcctcggccttgaagggagatctgtttat
gaagaagactttgaggcaccgttcttagaaatgtctgcagaatttttccagatggagagc
caaaagttccttgcagaaaacagtgccagtgtgtacataaagaaggtggaagccaggatt
aatgaggagattgagcgggtgatgcactgcctggataagtccacagaggagcctattgtc
aaggtggtggaaagggaactcatctctaaacacatgaaaaccattgtagagatggagaac
tcaggcttagtccacatgctcaagaacggcaaaacagacgacttggcgtgcatgtacaag
ctgtttagcagggttcccaatgggctgaaaaccatgtgtgagtgtatgagctcgtatctg
cgggagcaaggcaaggctctcgtgtcagaggagggagagggaaagaaccccgttgactac
atccagggtctgcttgacttgaagtcgcgtttcgaccgtttcctccaggagtccttcaac
aatgaccggctcttcaaacaaactattgctggcgactttgagtacttccttaacctcaac
tctcgctcacctgagtacctctcactcttcattgatgacaaattgaagaaaggtgtaaaa
gggttgacagagcaggaggtggagtctatactggacaaggccatggtgcttttccgcttc
atgcaggagaaggacgtgtttgagaggtactacaagcagcacctggcccgcaggctgctc
accaacaagagcgtctctgatgactcagagaaaaacatgatctcgaaactcaagaccgag
tgcggctgtcagttcacctctaaactggagggcatgttccgggatatgagcatctccaac
accaccatggatgagtttagacaacatctacagacaactggggtgtcacttggaggggtt
gatctcaccgtgagagtcctgaccacaggatactggccaacacaatcggcaacacccaaa
tgcaatatccccccttcaccgcgacatgcatttgaagtctttaggaggttttatcttggt
aagcacagcggcagacaactcacactgcagcaccatatgggctctgcagatctaaatgcc
accttctacggtcccatcaaaaaggaggatgggtcagaggttggagtgggaggagctcag
gtgacaggctccaacaccaggaagcacatcctgcaggtctccaccttccagatgaccatc
ctcatgcttttcaacaacagagacaagtccacctttgaggagatccagcaggagacggac
atcccagagagggagctggtgcgagcgctgcagtcgctggcctgtgggaaacccactcag
agagtcctcaccaaggagcccaagtccaaggagattgagaatggccatgtgtttacagtc
aatgaccagtttacctccaaactgcaccgtgtcaagatccagacagtggcagctaaacag
ggggagtcagacccagagaggaaggagacacgacagaaagtggatgatgacaggaagcat
gagatcgaagctgccattgttcgcatcatgaagtctagaaagaagatgcagcacaatgtc
ctggtagcagaggtcacacagcagttgcgagcgcgattcctccctagtcccgtagtcatc
aagaagcgtattgaaggactcattgagagggaatatttggcaagaacaccggaggaccgc
aaagtgtacacttatgtagcataa
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