Xiphias gladius (swordfish): 120792339
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Entry
120792339 CDS
T07311
Symbol
cntn5
Name
(RefSeq) contactin-5 isoform X1
KO
K06761
contactin 3/4/5/6
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xgl04515
]
120792339 (cntn5)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
xgl00537
]
120792339 (cntn5)
Cell adhesion molecules [BR:
xgl04515
]
Immunoglobulin superfamily
Contactins
120792339 (cntn5)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
xgl00537
]
Others
120792339 (cntn5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
Ig_C17orf99
Ig_5
Ig_DSCAM-DSCAML_C
Ig_4
Pur_ac_phosph_N
C2-set
Interfer-bind
fn3_4
Motif
Other DBs
NCBI-GeneID:
120792339
NCBI-ProteinID:
XP_039987393
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Position
LG7:complement(23688645..23795707)
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AA seq
1102 aa
AA seq
DB search
MGSPWKPFLLLSVISGLSDFARAVAARPISYAAVLRMKPDSSPSVLNSRSRPRQHHSGGL
VTPDWPAFSSHPLSALSLLGSQEDYRSEESEEFGPVFVQEPDDVIFPLDSDEKKVVMHCE
ARGNPLPTYSWYINGTEVDAEAGYHYSLIDGNLIINNASEITDYGKYQCKAENSFGTVLS
RDALLQFAYLGAFSGKTRGGVSVREGQGVVLMCTPPPHSAEIIYSWVFNEFPSFVAEDSR
RFISQDTGNLYISKVQSSDLGSYICLVKNTVTNARVLSPPTPLTLKTDGVMGEYEPKIEV
HFPTSVLAAKGVTVRLECFALGNPVPTITWRKINGNIPKKARLRKSQAVLEIPNIQLEDS
GTYECKAENPRGGTAFKGHLQVYTFPQWVRMINDTQMDSGEKLQWECKATGRPRPTYRWL
RNGLPLTTQGRVEILNGDLTIHKVQQTDSGMYQCVAENKYGAIYSNAELKILASAPVFVP
NPIRVIATLGKDVSLECKPRASPKPRITWKRGDRRIQPSKRIMLLRNNTLRIVNSSRADE
GNYVCRAENQLGSAEMTAILWVKEAMRVELSPVRVEVTVGESVVLSCKATHDTSLDVAFQ
WFFNQKPINFEQDGGHFEYIQTVRARVRAKRSSTVDLMIRSILLKHAGKYGCRAQTSADT
VFAEAELLVRGPPGPPGVVIVEEITDTTATLSWTRGLDNHSPISTYNLQARSPFSLGWQT
VKTDPDPVTGDMESAIAVELNPWVEYEFRVVASNAIGTGDPSAPSRGVRTKEAVPSVAPA
NVSGGNGRRHELVISWEPVSEEFQNGEGFGYIVAFRANGSRGWKEKMVTSADSTTYKYRD
ETFPPLTPFEVKVGVYNNKGDGPFSKVVIIHSAEGEPREAPSDVKAQSISSSEIRVTWKP
PNPGPGRPRGYEVSYWKDMEQEELGKKRRTVKNETSMVLAGLEGNSLYLITVKGFNSIGQ
GPASAAVTAKTRKTPPAHPPANLMWIQEGNNVSLSWDPVKAKDNESDVIGYMVLLKQEGR
GHNQVTRTINPSTMLSLPEGGTYIIEVRALSEGGEGAVSSQVRVVTSSGVRAKSNQCSVH
CVPQSTTWTALLLVLLVPSASW
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggggtcaccatggaaaccatttctcctcctgtctgtcatcagtggcctttcagatttt
gcaagagctgtcgcagcacggcctatatcatatgcagcagtattgcgaatgaaaccagac
agctcaccgtcagtgctcaactcacgcagcagacctcgacaacaccacagtggtggactg
gtgactcctgactggcctgctttctctagtcaccccctgtcagccctgagtctgctcggc
tctcaggaggactaccggagtgaagaaagtgaagagtttgggcctgtttttgtccaggag
ccagatgatgttatttttcctttggattctgatgaaaagaaagtggtaatgcactgtgaa
gcacgggggaatccattacccacatacagttggtacatcaatgggacagaagtggatgca
gaggcaggttaccactacagcttaattgatggaaacttaattattaacaatgcaagtgag
atcactgactacgggaagtaccagtgtaaagcagagaacagctttgggaccgtcctaagt
cgagacgctctattacagtttgcatatctcggggctttcagtgggaagaccagaggtggg
gtttctgtgcgcgaaggccaaggtgtggtactcatgtgtacccctcctcctcattcagca
gagattatctacagctgggtgtttaatgagttcccctcatttgttgctgaggacagtcgg
cgcttcatctcccaggacacaggaaacctgtacatctcgaaggtgcaatcctctgactta
ggaagttacatctgtctggtcaagaacacagtgacaaatgcaagggttctgagccctcca
acacctctgacactgaaaactgatggtgtcatgggtgaatatgagcccaaaattgaagtg
catttcccaacatctgttctggctgccaaaggagtcactgtcaggctggagtgctttgct
ctggggaacccagtgcccacaatcacatggagaaagataaatggcaacatccccaagaag
gcaaggcttcggaagtcccaggctgtgctggagattcccaacattcaactggaggactcg
ggaacatacgaatgtaaagctgagaatccaagaggaggcactgctttcaaaggacatcta
caggtctacaccttcccccagtgggtcagaatgattaatgatactcagatggatagcgga
gagaagctccaatgggagtgcaaggccacggggaggccccgacccacctatcgctggctt
cgtaatggtttgcccttgacaacccagggtcgagttgaaatactgaatggcgatctgacc
attcacaaagtacagcagacggactcaggaatgtaccagtgcgttgcggaaaataaatat
ggggccatctactccaatgccgaactgaagattttagcgtcggcacctgtttttgtcccc
aatcccatacgggtcattgccacgcttggaaaagatgtatcactcgaatgcaaacccaga
gcgtcgcccaaaccacggataacctggaagagaggagacagaaggatacagccaagtaaa
aggattatgttgttacggaacaacactctgagaattgttaactccagccgagctgacgag
gggaactatgtgtgccgggcagagaatcagttgggctcagcagagatgactgccatactg
tgggtaaaagaggccatgcgtgtggagcttagtccggtcagagtggaggtgactgtgggg
gagagcgtggtgctgagctgcaaggcaacccatgacacatcgctggatgtggctttccag
tggttcttcaaccaaaaaccaatcaactttgagcaagatggcggccactttgaatacatc
caaacagtaagagcgagagtaagagcaaaacggtcttcaacagtggatctgatgattagg
agcattttgttgaagcatgctgggaagtatgggtgtcgggcccagaccagtgccgacact
gtatttgcagaggctgaacttctcgtgcgaggtcctcctggaccccctggagtggtgata
gtggaggagatcacagataccacagccaccctgtcctggactcgtggcctagacaaccac
agccctatcagcacctataatttacaggcccgcagcccattttcattaggctggcaaact
gtcaaaacagacccagacccagtgacaggggacatggagtcagccattgctgtggagctc
aacccctgggtggaatacgagttcagggtggtggccagcaatgcaatcgggacgggagat
cccagtgcaccttcaagaggagtaaggactaaagaagcagtcccatcagtggcaccagcg
aatgttagtggagggaacggccgcaggcacgaacttgtcatctcgtgggagcctgtatct
gaggagttccaaaatggcgagggctttgggtatattgttgcatttcgtgccaacggatcc
cggggctggaaggagaagatggtgacttcagcggattctacgacatacaaatacagagat
gagaccttccctcccctcaccccatttgaagttaaggtcggagtatataacaataaggga
gatgggccattcagcaaagttgtcatcatccactctgctgagggggaaccaagggaagca
ccctctgatgtgaaagctcaaagcatttcttcatcggaaattagggtcacttggaaaccg
cccaaccctggccccggaagaccaagaggatatgaggtcagctactggaaagacatggag
caggaagagttgggaaaaaagcgaagaactgtgaaaaacgaaacatccatggtcttagca
ggactagaaggcaacagtctgtatctcatcacggtaaagggcttcaacagcatcggccag
ggtccggctagtgctgctgtcacagccaagaccagaaaaacccctcccgctcaccctcca
gccaacctcatgtggatccaagagggcaacaacgtgtctttaagctgggacccagtgaag
gcaaaagacaatgaatctgatgtcatcgggtacatggtgttgctcaaacaggagggcaga
ggccacaaccaggtgacaagaacgattaacccttccaccatgctctcactgccagaggga
ggcacctatatcatagaggtgcgtgccctcagcgaagggggagagggagcggtcagctcc
caagttcgagttgtcacctcttccggtgttcgagcaaaaagcaaccagtgctcggtgcat
tgcgtgccacagagcacaacatggacagcactgctcctggttcttctggtgccttcagcc
tcctggtga
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