Xiphias gladius (swordfish): 120792511
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Entry
120792511 CDS
T07311
Symbol
frem2b
Name
(RefSeq) FRAS1-related extracellular matrix protein 2b isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04512
ECM-receptor interaction
xgl04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120792511 (frem2b)
04518 Integrin signaling
120792511 (frem2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
xgl04091
]
120792511 (frem2b)
Lectins [BR:
xgl04091
]
C-Type lectins
Lecticans
120792511 (frem2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
DUF6522
C1orf162
Motif
Other DBs
NCBI-GeneID:
120792511
NCBI-ProteinID:
XP_039987664
LinkDB
All DBs
Position
LG7
Genome browser
AA seq
3130 aa
AA seq
DB search
MRKVQRVSSYGSTLQMARIIPPHLHGTGAALILLAVILTGDAVAQVVDSYGLSYALRSEL
TEDTILVANNGIRVPFGRSVFIDPINDLVIQVQPGDRCSITVLDNDPLSQRPGHLSPKKF
PCEFGPNDVKYSHFGSRSPPRDRVRLQLRYDTQTDTIIIPFMMEVEVVFTQLEVLTKNMP
LTVEKLLDTSNPIDRRILEFTYDRSAQQCKIASLSSSSVLPRYGKLVDEDSLGAMVDCDE
FIKMNIRYQHTSALQSPNRDYIPMLVELHDKEGNLLKQEFFQILVRIKEGEENTAPKPSF
VAMMMMEVDQFVMTALTMDMLAAEDVESIPDELIFNITSPLSFEEGYIVSTDDRNLPITS
FYQGDLKDLKIAYKPPAVDSDTERIFQIEFEVVDTEGAVSDPFAFMIVVKPMNTLAPVVT
RNTGQLLYEGQSRPLSSSQNLEISDEDNLDKVRITVIDGLRHGELTVLGSRGKFFTPTDL
DAGVVIYQHDGSDTYSDNIIFRMTDGTNEVEFLFPITVVPTDDEPPIINANTGLILFKNQ
MMPVSSLMLSAADIDSEDSTIKFLTEPPFSTIGQVLLRQSEAPEDPSTWKFNTGDEMYEK
VVTEWLQRDITDGKVFYKHIGPHSTTTVMDQFVFRVQDDNDPPNQSDKSSFIIKILPVDD
LPPELYPGTTLQVTVHEYQLTYFRKKFLRYTDLDSEDRDLKYTITQPPTDTDENSPVVLG
ALVLTEKPNTEVTTFTQAQINHHKIAYKPPDLELGITTHVLQFRYTVEDVSGNSVEGVFT
IFLKPVDNKPPQITNSGFTVLERGTHIITSAELDTSDTDTDSKQITFTISQPPLHGQIQF
TFTDMTKGDTFSLEDIGSGRISYIHNGDESTVDLIQIDVSDGVHVVPIIIKINVKPVDDE
TPTISLPAGTIGSYIDVLENGATEITSNVIQGRDEDTDDLRLTFIVEDPPSLGEILVKGV
PSGTFTQADIINGLVVYAHTSGEIGFTTKEDFFNLTLTDMSDEWTVGGNKITGVRVHVTI
LPLDSQAPEVFVGPQFTVAEGEKNVIQILHMSADDVDTPNDDLLCTIIVQPTSGYVENIS
PAPGSEKSRAGTAISAFTIKDIRQNHIYYVQSIHKGVEPVEDRFTFRCSDGINFSERHFF
PISIIPSNDEKPEIYMREFVVMEGMNIVIDTPILNGADADLPPDQLTFIIAKPPKHGFIL
NQLTTGTVPVFNFTLDQIREASSIVYEHDDSETTEDSFDIVLTDGKFSVEKTVIVMIIPV
DDETPRMAINDGLEIEIGDVKVINSNVLKATDLDSEDSMLTYIVRYGPGQGYLQRTLPSG
TFQNITVGMNFTQNEVDQGLIVYIHNGQEGIRDLVKFDVTDGVNPLIDRYFYVTVGGIDM
VFPDVVSKGVSLKEGGKVTLTTDLLSTSDLNSPDEHLVFTITRAPMRGHLECTDTPGMPI
SSFTQLQLAGNKIYYIHTADDEVKMDSFEFEVTDGYNPVFRTFRISISDVDNKKPVLTIH
GLVVTEGENKLITPFELTVEDRDTVDRLLRFTVTQIPVHGRLLFNNTRPVNSFTKQDLNE
NMISYKHDGTESAEDSFSFTVTDGTHTDFFVFPDTVFDTRKPQVMKITVLSVDNGVPQIV
VNKGAPTLRVLETGHLGFVITSKTLKAEDRDSIQNSVTFRITVAPEHGYLINLGKGNATI
TTFTQAEVDDMNICYVLRDGDNATNDIFSFSIEDNGGNKLKNQQFRLNWAWISLEKERYV
VDEEVKFLEVVLKRRGYLGETSFVSIGTKDGTAEKDKDFRGKSQKQVQFNPGQTTATWRV
RILSDSEYEVSETFQIVLSEPVMAALEFPEVATVEILDPDDESTVFIPSAAYNIEEDIGE
LLIPVRRSGDVSQELMVICYTQQVSATGTIPTTVLSYSDYISRPEDHRSILRFDKGEVEK
SCRVVIIDDSLYEEEEIFTVTLSMPMGGRLGSEFPTARITIIPDTDDAPVFYFGNTDYNV
DESDGFVEVQVWRTGTDLSKGGTVTVRSRKTEPVSAEAGVDYVGISRNLDFAPGVTMQTF
RVTILDDLGQPVLEGPEKFELVLRMPMNGILGEPSKATILINDSVSDLPKVQFRDAVYVG
NEDSGQISATVYRSGDISYRSTVRCYSRQGTAQVMMDFSERPNTDASIITFLPGEIEKPC
VLVLVDDTDHEEEEELRLVLGSPKSESPFGASIGGQNETLIKIKDDADKAIIRFGETKFS
VNEPKESGQVSVVKISVLRVGDTSKVSVVRVHTKDGSATSGEDYHPISEEIVFKEGDKEH
YVEVEILYDGVREMREAFTVHLKPDENMVAETKMSKAIIYIEETNSMADVTFPSVPRVVS
LLHYDDIDRTRDSLPVAGYPVICVTACNPKYPDYDKTGSICVSENINNTLTRYRWLVSAP
TGTDGVTSPMREVDFDTFFTSSKLITLDSVYFQAGSRVQCAARAVNSNGDEGLELPSPIV
SISLGEGMCQPRVVGTVGAEPFSAKLRYTGAEDTDHPNLIKLTVTMPHIDGMLPIVSTRP
LSNFELTLSPDGTRVGHHRCSNLLDYAEVKTRYSFLTEATKNPEVIGETAPYQYSPSLRG
SSTLRFYRNLNLEACLWEFTSYYDMSELLSDCGGTIGTDGQVLNLVQSYVTLRVPLHVSY
VFHSPVGAGGWQHFDLQSELRLTFVYDTAILWRDGIGSPPEAELQGALYPTSMRINGHGR
LVVNFRTEARFRGLFVFAHPGSPLTSMVMCPDHPGLTFNLSLVRNEPTYNQPIQQWTFIS
DFAVRDYSGTYTVKLVPCTSPASLEYTIPPVCNPREPLTFDLDIRFQQVSDPVAAEFSLN
TQMILLSKRTLWLSDGSMGFGQESDTAFSQGDTVYGRVMVDPVQNLGDSFICNIEKVFLC
TGADGYVPKYNPSNFEFGCLADAPSLLYRFKIIDKAQPETQAQSFGNVAFNAFLAVDDPG
ALALVRQPGSDGFRMDSSALFQVSAGREWYIHTIYTVRSRDNANRGIGKRSLEYHAMSQH
TDLLPNGQPRTRRSANDVPDIIEEIGVSNNRGTNILHIALDHSSQRRTSPEREIFTKGII
PRELNQKDNSDDRLLLITGIFVGLLLMVLVLIVVALAVRSKREKKDVPQNSSSAEPMMTR
GLSNSDSSEV
NT seq
9393 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaagttcaacgcgtctcgtcatacggctccacactacaaatggctcggatcatc
cccccgcatctacacgggactggcgctgccttgattctgctcgcggtgattctgacaggt
gatgcggtcgcgcaggtcgttgacagctatggattatcctacgccttgaggtccgagttg
acagaggacacgatattggttgccaataatgggatccgcgtgcctttcgggagatccgtc
ttcattgatcccatcaacgatttggttatccaagttcagcccggtgacagatgcagcata
acagtcctggacaacgatcccctgtctcaaaggccgggacacctgtctccgaaaaagttt
ccgtgtgaattcggccccaacgacgtgaagtattctcacttcggctctaggagtcctccg
agggatagagtgagattacaactcaggtatgacacccaaacggataccattataatacct
tttatgatggaggtggaagtcgtgttcacacagctggaggtactaaccaaaaatatgcca
ctcaccgttgagaaactgctcgacacaagtaaccccatcgatagaagaattttagaattc
acctatgatagaagtgcccaacaatgcaaaatagcctctctctccagcagcagcgtgctg
cccaggtatggaaaacttgtagatgaggacagccttggagccatggtggactgtgatgaa
tttattaaaatgaacatccgttatcagcacacttctgctctgcagtcaccaaacagagat
tacattccaatgcttgtggagttacacgataaggaaggcaatttgctcaagcaggaattt
ttccaaattttggtcaggattaaagagggagaggagaacacagcccctaagcccagcttt
gttgcaatgatgatgatggaagtagaccagtttgtaatgacggcgttaaccatggatatg
ctagcggccgaggatgttgagtctattccagacgaattaattttcaatatcacatcaccc
ctgtcttttgaggagggctacatagtgagcacagatgataggaatttaccaataacctcg
ttttaccaaggagacctcaaagacttgaaaatcgcctacaaaccccctgctgtggattca
gacactgagcggattttccagattgagtttgaggttgtggacacagagggggctgtgtca
gaccctttcgctttcatgattgttgttaagcctatgaacacgttggcccctgtggtgact
aggaatactggccagttactgtatgagggtcagtccaggcctctgtccagttcacagaat
ctggaaatcagcgatgaggacaatttagacaaagtcagaatcactgttattgatgggctg
aggcatggagaattaactgttctgggctcgagggggaaattttttaccccgactgaccta
gatgctggagtagtcatttatcaacatgatggcagtgacacatacagtgataatatcatt
ttcagaatgacagatggcacaaatgaggtggagtttctgtttcccatcactgttgtgcca
actgatgacgagcctcccataatcaatgccaacactggtttgattttattcaaaaaccaa
atgatgccagtctcctcacttatgctcagtgcagcagatatcgactcagaggattctaca
ataaaattcctcacagagcctcccttttccaccattgggcaagtgctgctgcgtcaatct
gaggccccagaagacccatcaacctggaagtttaatacaggggatgaaatgtatgagaaa
gtagtgactgaatggctgcagcgggatattactgatggtaaagtgttttacaagcacatt
ggcccccacagcaccaccacagtcatggatcagtttgtgtttagagttcaagatgacaat
gacccaccaaaccaatcagacaagagctcattcattatcaaaattctccctgttgacgac
ctcccacctgaactttaccctggcacgactctgcaagtgacggtgcatgagtatcagctc
acttacttccgaaagaaattcctccgttacactgacctcgactcagaggatagggatctc
aaatacacaattacccagccaccgacggacacggatgagaatagccctgttgtattggga
gctctggtattaactgaaaagccaaacactgaggtcacaactttcactcaggcacaaatt
aaccaccataaaatagcttacaaaccacctgatcttgaacttggaattaccactcatgtt
ttgcagtttaggtacactgtggaggatgtttctggaaatagtgtagaaggagtattcaca
atatttttaaagcccgtggacaacaagccgcctcaaataaccaactctgggttcactgtg
cttgaacgtggcacacatatcattacaagtgctgagctggacacctcagatacagacaca
gacagcaaacaaataaccttcactatttctcagccaccactgcatggccagatccagttt
acgttcaccgacatgacaaaaggagacactttcagcctagaggatattggaagtggcaga
atttcgtacatccataatggggatgaatcaacagttgatttgatacaaatagatgtcagc
gatggggtccatgttgtcccaattattataaagattaatgtgaagccagttgatgatgag
actccaaccatcagtctaccagctggcacaattggctcttacatagatgtactggaaaac
ggagcaacagaaatcacaagtaatgtcattcagggaagagatgaggacacggatgacctt
cgtttgaccttcattgttgaggacccgccatcattaggtgaaatcctggtgaaaggtgtc
ccgtctggtacattcacccaagctgatatcattaacggccttgtggtctatgctcataca
agtggggagataggctttaccacaaaagaggactttttcaatctcactctgacagacatg
tctgatgagtggactgttggaggaaataagatcacaggtgtcagagtgcatgtaactatt
cttcccctggacagtcaggctccagaggtctttgtgggacctcagttcactgttgctgag
ggagagaagaatgtcattcaaattctccatatgagtgctgatgatgtcgacacccccaat
gatgacctcctttgtacaatcattgtacagccgacttcagggtatgtggaaaatatctcc
ccagcccctggctcagagaaatccagggctgggacagccattagtgctttcaccatcaag
gacatcagacagaatcacatttactatgttcaaagcattcacaaaggagtcgagccagtg
gaggataggtttacgttcagatgctctgatggcatcaatttctctgaaaggcactttttc
cctatctccataatcccctctaatgatgaaaagcctgagatttacatgagagagtttgta
gttatggaaggcatgaacatagtcattgacactcccattctgaatggtgctgatgcagat
ctcccccctgatcagctcacattcattatcgccaaaccccccaagcacggatttattctc
aatcagctcactactggcaccgtccctgtttttaacttcaccttggatcagatcagggag
gcctccagcattgtgtatgagcatgatgactcagagaccacagaggacagctttgatatt
gttctcacagatggaaagttcagcgtagagaaaacagtaatagttatgattatccctgta
gacgacgaaaccccgcggatggcaatcaatgatggccttgaaattgagataggtgacgtg
aaagtcataaacagcaatgttttaaaagctacagatctggactctgaggatagcatgcta
acttacattgttcgctatgggcctggtcaggggtatttgcagagaacactgccctctggg
acatttcaaaatatcacagttggaatgaactttacacagaacgaagtggaccagggtttg
attgtgtacatccataatgggcaagaagggattcgagacctcgtcaaatttgatgtgaca
gatggcgtcaaccctttgattgacagatacttttatgtaacagtgggtggcattgacatg
gttttcccagacgtggtcagtaaaggtgtatccctcaaggagggtggcaaggttactctg
acaacagacctactcagtactagtgaccttaacagcccagatgaacacttggttttcaca
atcacccgagctccaatgagaggccacctggagtgcacggacacacctgggatgcccatc
tcatcgttcacacaactccagctggctggcaacaaaatctactacattcacactgctgac
gatgaagtgaaaatggatagctttgaatttgaggtaactgacggctacaaccctgtgttc
cgcactttccgcatttccatctctgacgttgacaataaaaagcctgtgctgaccatacac
ggactggtagtgaccgaaggagagaacaaactcatcacgccttttgagctaacagttgag
gacagagacaccgttgaccgcctcttgaggttcacagtcactcaaatcccagtgcatggt
cgcctgctctttaacaacaccaggcctgtcaactccttcacaaagcaggacctgaatgag
aacatgatcagttacaagcacgatggcacagagagcgcagaggacagcttctccttcact
gtcactgatggcacgcacacagacttcttcgtcttccccgacacagtattcgatactcga
aagccccaagtaatgaagattactgtcctctcggtggataatggggtaccgcagattgtg
gtgaacaagggtgcaccaacattgcgggttctggagacaggtcacctggggtttgtgatc
accagtaaaactctcaaagcagaggacagagacagcattcagaattctgtgacctttagg
attactgttgccccagaacacggctacctgatcaaccttggcaaaggaaatgccaccata
accactttcacgcaagctgaagttgatgacatgaacatctgctatgttctgagagatggt
gacaatgctacaaatgacatcttctctttttccattgaggacaatggaggcaacaaactg
aagaaccagcagttccgtcttaattgggcttggatctctttagagaaggaacgctacgtg
gtggatgaagaggtcaagttcctagaggtggtgctgaaacgtcgtggctatctgggggaa
acttcgttcgttagtattggcacaaaggatggcactgcagaaaaggacaaagatttccgg
gggaaatctcaaaaacaggtgcagttcaaccctggccagaccacggccacctggagggtc
cggatcctgtcagacagcgaatatgaagtgtcagagaccttccagatcgttctgtcagag
ccggtgatggcagccctcgaattcccagaggtcgccactgtggagatcctggaccctgat
gatgaatcaacagtgttcataccctcagctgcgtacaacatagaggaggacattggtgag
ctgcttatcccggtacgccggagtggggacgtcagtcaggagctcatggtcatctgctac
acccagcaagtttcggccacaggcaccatccccaccacagtgctgtcctactctgattac
atctccaggcctgaggaccatcgcagcatcctgcgttttgacaaaggagaggtggagaaa
tcctgccgggttgtgatcatcgatgactccctgtatgaagaggaggaaatattcaccgtc
accctcagtatgcccatggggggacgtctgggctcggagtttcccacagccagaatcaca
atcattcccgatacagatgacgctcctgtcttctactttggcaacacagactacaatgtg
gatgagagcgacggcttcgtggaggtgcaagtgtggaggacggggactgatctttccaag
ggaggaaccgtcacagtgcgctcaagaaagacagagcctgtctcagcagaggctggtgta
gattacgtggggatcagccggaatctggactttgcaccaggggtcaccatgcagactttt
cgcgtgaccatcctggatgacctgggccagccagtgctggaggggccagagaagtttgaa
ctggtactacggatgcccatgaatgggatcctcggggagccaagcaaggctaccatcctc
atcaatgactcagtttctgacttgccaaaggtgcagttccgtgacgctgtgtatgtgggc
aatgaggactcggggcagatttcagctactgtgtaccgtagtggtgacatcagctacagg
tccacagtacgctgttacagcaggcaggggacagcccaggtcatgatggacttcagtgag
cggcccaacacagatgcttccatcatcaccttcttaccaggagagattgaaaagccttgc
gtactggtactagttgatgacacggatcatgaggaagaagaagagctccggcttgtgttg
ggaagccccaagagtgaatctccatttggagcatctattggggggcagaatgagacactc
atcaagataaaagacgatgcagacaaggcgattataaggtttggagagaccaaattcagt
gtgaatgagccaaaggaaagtggacaagtgtctgtagtgaagatctcagtgctgcgtgtt
ggagacacctccaaggtctctgttgtccgagttcacaccaaggacggatctgctacctct
ggggaggactaccatcccatatctgaggaaattgtgttcaaagagggtgacaaggagcac
tatgtggaggtggagattttatatgatggtgtcagagaaatgagggaggcattcactgtc
cacctgaagcctgatgagaacatggtggcagaaacaaagatgagcaaagccataatttat
atcgaggagaccaacagcatggcggatgtcaccttcccttcggtgcccagagtggtttct
ctgctgcattacgatgacatcgacaggaccagggactctctccctgtggctggttaccct
gttatttgtgtcactgcctgtaacccaaagtacccagactatgacaaaacaggctccatc
tgtgtaagcgagaatatcaacaacaccctgacacggtatcgttggcttgttagtgccccc
accggcaccgacggtgtcaccagccctatgagggaagttgactttgacaccttcttcacc
tcctccaagctcatcactttggactcagtctacttccaggctggttccagggtccagtgc
gccgcaagggcggtgaactctaacggggatgaaggtctggaactccccagccccatagtg
tccatcagcttgggcgagggaatgtgccagcctcgtgttgtaggcacagtcggggccgag
cccttctctgcaaagctacggtacactggagcagaagacacagaccaccccaacctcatt
aaactaactgtcaccatgcctcacattgatggtatgttgcctatagtgtccacccggccc
ctgtctaactttgagctcacactgagccctgacggtacccgtgttggccaccatcgctgc
tctaatttattggactacgctgaggtcaagactcgctacagcttccttactgaagccacc
aaaaatccagaggtgatcggtgagaccgcgccctaccaatacagcccctccctcagggga
tccagtacactgcgattctacagaaacctcaacctggaggcttgtttgtgggaattcacc
agctactatgacatgtctgagctgctaagtgactgtggaggaaccatcgggactgatgga
caggtgttgaatctggtccagtcctatgtgaccctacgagtcccactccatgtgtcctat
gtcttccactctcctgtgggagcaggaggatggcagcacttcgacttacagtcggagctg
aggctcacattcgtgtacgacactgccatcttatggagggatggtatcggtagcccacca
gaggctgaactgcaaggtgccctttacccaaccagcatgcgtataaatggccatggacga
ctggtagtcaacttccgcactgaggctcgattcagaggcctgtttgtgtttgcgcatcca
ggttcaccactcacctccatggtcatgtgtccggaccaccctggtctgacctttaatctc
agtcttgtgaggaatgagccaacctacaaccagcccatccagcagtggacattcatctct
gattttgctgtgcgtgattactcgggaacctacacagtgaagctggtcccctgtacatcc
cccgccagcctggagtacaccatcccacctgtctgcaatcccagagagcctcttaccttc
gacctggatatccgctttcagcaggttagcgaccccgtggcagccgagttcagtctgaac
acgcagatgatcttactctctaagcggactctctggctctcggatggctccatgggcttt
ggacaggagagtgacactgccttctcacagggggatacagtttatggccgagtgatggtg
gatccagtgcagaacctgggcgactcttttatttgtaacatagaaaaagtgttcctgtgt
actggagctgatggatatgtccccaaatacaaccccagcaactttgagttcggctgtctg
gctgatgctccatcactactctacagattcaagatcattgacaaggcccaaccagagact
caggcccagtcatttggcaatgtagctttcaacgccttcctggcggtggatgaccccggc
gctttagctctagtgagacaacctgggtcagatggtttcaggatggattcctcggctctc
ttccaggtgtctgcagggagagagtggtacattcacaccatctacaccgtccgttcccgg
gacaacgctaaccggggcatagggaagagaagtctggagtaccatgcgatgagccagcac
acagacctgcttccaaatggtcaacctcgcaccaggagatcggccaacgatgtgccggac
ataatagaggagatcggtgtgagtaacaaccgcggcaccaacatcctgcacatcgcgctg
gaccacagcagccagaggaggacgagcccagagagggagatcttcaccaaagggatcata
ccccgtgagctcaaccagaaagacaacagtgacgacagactgttgttgatcactggtatc
tttgtcgggctgctcctcatggttctcgtcctcatcgtggtggcgttagcggtccggtcc
aagcgagagaagaaggacgtaccccagaactccagcagcgcagagcccatgatgacacga
ggcctcagcaacagtgacagttcagaggtttag
DBGET
integrated database retrieval system
