Xiphias gladius (swordfish): 120792697
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Entry
120792697 CDS
T07311
Symbol
lingo1a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120792697 (lingo1a)
Membrane trafficking [BR:
xgl04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
120792697 (lingo1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
LRR_1
Ig_3
ig
Ig_2
LRR_9
LRR_Zer-1
LRRNT
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
120792697
NCBI-ProteinID:
XP_039987880
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Position
LG8:complement(24196900..24222208)
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AA seq
615 aa
AA seq
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MVAGEATGHSYLVACWQPILILMLGTVLSGSTTGCPSRCECNVQERSVMCHRKKLMTVPE
GIPAETRLLDLSKNRIRTINPDEFATFSNLEHLELSENTISTIEPGAFNNLYGLRTLGLR
SNKLKLIQLGVFTGLSNLTQLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAF
HGLSSLEHLSLEKCNLSSVPTEAFTHLHSLITLRLRHLNINVIRDYSFKRLYRLKVLEIA
NWPYLDTMTPNCLYGLNLTSLTIANANLTTIPYVALRHLVYLRFLNLSYNPIHTIEGNKL
HDLLRLQEFHLVGGRLAMIEPYSFRGLNYLKILNVSGNSLSTLEESAFHSVGNLETLALY
DNPLACDCRLLWVFRRRWRLNFNRQQPTCASPEFVQGKEFKDFPDVLQPNYFTCRKSRIR
DRKPQQKFVDEGAIVHFACQADGDPAPVIMWLSPQKKFITTKTIGRLSVLPDGTLEVRYA
QIQDNGTYVCIASNAGGNDTSLAHLHIHSYSPDWPHQPNKTFAFISNQPTETGANGTRAN
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGMS
SSTVDAPRKFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggtggccggggaagcgactgggcacagctacctggtggcttgctggcagcccattctg
atcctgatgctgggcaccgtgctgtctggctccaccacaggctgtccatcccgctgtgag
tgcaatgttcaagagcgctctgtgatgtgccaccgcaagaagctcatgacagttcctgag
ggtattcctgcagaaacaagactgctggacctcagcaagaaccgtattagaaccatcaac
ccagacgagtttgctaccttttccaaccttgaacacctggagctcagtgaaaacacgatc
tccactattgaacctggagcattcaacaacctttacggcttgcggacattggggctgcgt
agcaacaagcttaagctgatccagctcggtgtcttcacaggccttagcaatctcacacag
ctggacataagtgaaaacaagattgtcatcctgttggactacatgttccaggatttgtac
aacctccggtctttggaggtgggtgataacgacctggttttcatctcccaccgggctttt
catggcctaagtagccttgagcacctgagtcttgagaagtgcaacttgtcatctgtgcca
acagaggcttttacccacctccacagcttgatcactctcaggctgcgccacctcaatatc
aatgtaatacgggattactcctttaaacggctctatcggctgaaagtgttggaaatagcc
aactggccatatttggatacgatgaccccaaattgcttgtatggattaaatctcacctcc
ctaaccattgcaaatgccaacctgaccacaattccttatgtagccctgcggcacttggtt
tatttgcgcttccttaatctttcatataaccctatccataccattgaggggaataagctc
catgatcttctgcgtctgcaggaatttcacctggtgggaggtagactggcaatgattgag
ccctactctttccgtggtctaaactacctgaagattctaaatgtgtctgggaactctctt
agcactttagaggagtctgctttccattcagttggcaacctggaaacccttgccttgtat
gataatcccctggcctgtgactgccgactgttatgggttttcagacgacgctggcgactg
aacttcaacagacagcaacccacctgtgcttctcccgaatttgtccaaggcaaagaattc
aaagacttcccagatgttctgcagcctaactacttcacgtgtcgcaagtctaggattaga
gatcgcaaaccccagcagaaatttgttgatgagggagccattgttcatttcgcatgccaa
gcagatggagatcctgctccagtgataatgtggctatccccgcagaaaaagttcatcacc
accaagacaattggaaggctctctgtgttgccagacggtacccttgaggtgcgctatgcc
cagattcaagacaatggaacatacgtatgtatagctagcaacgcaggcggaaatgacacc
tctcttgctcacctgcacattcatagctactcgcctgactggccacaccagcccaacaag
acttttgccttcatctccaaccagcccacagaaactggtgctaatggcacaagagccaac
gtccctttcccatttgatataaagacgttgatcattgcaaccaccatgggcttcatctct
tttctcggtgtcgtcttgttttgtctggtactgctcttcctttggagcagaggtaaaggc
aacactaagcacaacattgagatcgagtatgtgccacggaaatcggacgctggaatgagc
agcagcacagtggatgctcctcgcaagtttaacatgaaaatgatttaa
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