Xiphias gladius (swordfish): 120792728
Help
Entry
120792728 CDS
T07311
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120792728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xgl03021
]
120792728
03036 Chromosome and associated proteins [BR:
xgl03036
]
120792728
Transcription machinery [BR:
xgl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120792728
Coactivators
SAGA/TFTC/STAGA complex
120792728
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
120792728
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
120792728
NCBI-ProteinID:
XP_039987955
LinkDB
All DBs
Position
LG8
Genome browser
AA seq
996 aa
AA seq
DB search
MAGAADPLEDMLFNEVDEKAVSDLVGSLESQLGDRKTPAASYSDGKREAAPAAAGQFSGK
VRDQVGSVEPQQGHPKAGLTQEPGANEPLSGQTLSSSTSSVAAGAVITAGAALQTVGPAP
PTASPGPGPVTLTTQPAAASFHRAAVLGPSATPSSSIVPSAEATRTGSPGLQSLNGNGGA
VKLVNSPAVPPPAGASTVISTVSAGGSAIIASMASQPNFPVPQSSVASTAVALQRHPSPV
ASVAQNGVDPKGGQLVTQGAPSPSASTSQVMNHSNPLMHTKMLVPSQPVSGNSVILTSTP
PPAAAQSPISQAQTGTSTAAVTLAAAGVKPAINGVGQPTVAVVRPPGAPVVATSIQQQRP
GLVASSTRAAAPQLPLAVRPQQQTTIQLPPGFTMPPGMVLVRTETGQLVMVAQQVLAQAQ
AKTQQAQTVANITQRPGTPTAGATIRVSTATTAPGTPQTVRLASPAPPRMVQSPSTTTVQ
KAITVAPGGAAVSVKMTTPQKAPTVITAGGTPAAKPVGVSSTPLTSTTPAPTATPPTIVT
VVSQEMQENVKKCKNFLATLIKLASHNSPSPETSKNVKALVQELLDAKIEAEVFTTRLQA
ELKSSPQPYLIPFLKKSLPALRQSLLNSQQSLMTAAPSTSAPPPTAPGSVTTTAIRPRLP
ISPASSTVRVNTPLANTTALAVGRPGVQTVQTRTPVVISQTLRPQGTLVRGPTTIVGKSL
VNLAAQANQKKLSDPGGGTFRDDDDINDVASMAGVNLNEENARILATSSELVGTKIRSCK
DESFLPTGLLHRRILDTAKKLGVTEVPLDVVNFISHATQSRLRSLLEKVSAVAQHRTDGG
KDEEHYEQTSDVRSQLRFFEQLERMEKQRKDEQEREILLKAAKSRARQEDPEQARLKQKA
KEMQQQELAQMRQRDANLTALAAIGPRKKRKLDSPGGAAAGTEVASGSGAGSSPAASSRQ
QLRQRITRVNLRDFIFCLEQDRTTARSLMLYKALLK
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagccgccgacccactggaggacatgctcttcaatgaggtggatgagaaagcc
gttagcgacttggtcggctctctagaatctcaactgggcgaccgaaagactcccgctgct
tcgtattccgacgggaaacgggaggcagctccggccgccgcgggtcagttctcagggaaa
gtgcgcgatcaagtggggtctgtggagccgcaacaagggcatccgaaagcggggttaacc
caggaacccggcgctaatgagccgctctccggtcaaaccctctcctcctctacctcctcc
gtcgctgccggggccgtaatcaccgccggagctgccctgcaaacagttggaccagctcct
ccgactgcttcccctggaccgggacccgtaactttgacgactcagcccgccgctgctagc
ttccaccgggcggctgtcctgggtccgagcgcgactcccagctcctctatcgtcccctcg
gcggaggctaccaggaccgggtctcccggactgcaaagtttaaacggaaacggcggagct
gtaaagttggtgaactcgcccgcggtccccccaccagccggggccagcaccgttataagt
actgtcagtgctgggggatccgctatcatcgcctccatggcttcacagcctaatttcccg
gtacctcagtcctcagtggcgtctaccgctgtggctttgcagagacacccgagcccggtg
gccagcgtcgcccagaacggggtagaccccaagggtggccagctggtgacccagggtgcc
ccctccccatcagcctccacctctcaggtcatgaaccacagcaaccctctgatgcacacc
aagatgctggtgcccagccagcctgtttctggaaactctgtcatcctcacaagtacccct
cctcctgctgcagcccagtcccccatcagccaggctcagactgggaccagtacggctgcc
gtcaccctggctgctgcaggggtgaagcctgcgatcaatggagtgggtcagcccacggtg
gctgtggtgaggccgccgggcgctccggtggtggccacctccatccagcagcagagaccc
gggctggtggcgagctcgacccgggcagctgctcctcagcttccgctggctgtccggccc
cagcagcagaccaccatccagctgccccccgggttcaccatgcctcctggtatggttctg
gtccggacggagaccggtcagctggtgatggtcgcccagcaggtcctggcccaggctcag
gccaagacacagcaggcccaaacagtggccaacatcacccagagacctgggacaccgacg
gctggggccaccatccgggtcagcaccgccaccacggctcctggtacacctcagaccgtc
cgcctggcctccccggcgccacccagaatggttcagtctccctccaccaccactgtacag
aaggccatcacagtggcacctggcggcgcagcggtgtcagtgaagatgacgacccctcag
aaggcccccacagtgataactgctggggggacgcctgcggccaagcctgtcggtgtctcc
tccacccccctgaccagcacgacccccgctcccaccgccacgccccccaccatagtcact
gtggtgtcccaggagatgcaagaaaacgtgaagaaatgcaagaacttcctcgccacgctc
atcaagctggcgtcccacaattccccctccccagaaacatcaaagaatgtgaaggccctg
gtgcaagaactactcgatgctaagattgaggctgaggtgttcaccactcggctgcaggct
gagctgaagtcctccccacagccctacctcatccctttcctcaagaaaagcctccccgcc
ctgcgtcagtctctgctcaacagccagcagtctctgatgacggcagcccccagcacctcc
gcaccccccccgaccgcccccggctccgtcaccaccaccgctatcagaccgcggctgccc
atcagtccggccagcagcaccgtcagagtgaacaccccgctcgcaaacacaacagctctg
gctgtgggcagaccaggagtccagactgtacagactcgtacacctgttgtcatcagtcag
actctcagacctcaaggtacacttgtaaggggacccacaaccatagttggcaaaagtctg
gttaacctggcagctcaagccaatcagaagaaactgagcgatccagggggcgggacattc
agagatgatgacgacattaacgacgtggcgtccatggccggcgtcaacctaaacgaggaa
aacgctcgtatcctggcaaccagctcggagctggtgggcacaaagatccgctcctgtaaa
gacgagtccttcctgcccaccggcctgctgcaccgccgcatcctggacacagctaagaag
ctgggtgtgaccgaggtgccgctggacgtggtgaacttcatttcccatgcgacccagtcc
agactgcgctccctgctggagaaggtttcagccgtcgctcagcatcgtacagacggggga
aaggatgaggaacattatgagcagacgtcagacgttcgctctcagctccgtttcttcgag
cagttggagcgaatggagaaacagaggaaagacgaacaggagagagagatactgctgaag
gctgccaagagtcgcgccagacaagaagatcctgaacaggctcgcctgaagcagaaggca
aaagagatgcagcagcaggagttggctcagatgcgacaacgagacgccaacctcacggct
ctcgctgccatcggaccgcgcaagaaacgcaagctcgactcaccgggaggagccgcggcc
ggcacagaggtggcttcaggctcaggtgcaggctcctccccggccgcctcctcccgccag
cagctccgtcagcggatcacgcgagttaacctcagggacttcatcttctgtctggagcag
gaccgcaccacggctcgctctctaatgctctacaaagctctgctgaaataa
DBGET
integrated database retrieval system
