KEGG   Xiphias gladius (swordfish): 120792775
Entry
120792775         CDS       T07311                                 
Symbol
wdr61
Name
(RefSeq) WD repeat-containing protein 61 isoform X1
  KO
K12602  WD repeat-containing protein 61
Organism
xgl  Xiphias gladius (swordfish)
Pathway
xgl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    120792775 (wdr61)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xgl03019]
    120792775 (wdr61)
Messenger RNA biogenesis [BR:xgl03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     120792775 (wdr61)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta EIF3I ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_EML CFAP251_N Beta-prop_VPS8 DSE1_N Beta-prop_SCAP Beta-prop_ACSF4 Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_NOL10_N eIF2A Beta-prop_WDR41 Beta-prop_NWD2_C Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_IFT140_1st WD40_RFWD3 Tricorn_2nd Beta-prop_SPT8 Beta-prop_Nup120_160 Ge1_WD40 NBCH_WD40 PD40 Cytochrom_D1 TRM82_WD PAC11 ASA1 Beta-prop_NUP159_NUP214 PROPPIN WD40_like WDR54 UCP007778 Beta-prop_pof12 BCAS3_WD40 DUF2415 Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 120792775
NCBI-ProteinID: XP_039988037
LinkDB
Position
LG8
AA seq 312 aa
MSTQYSILFKQEHAHEDAIWTAAWGKSEADGSETIVTGSLDDMVKVWKWSDEKLELQWTL
EGHQLGVVSVDISHNGAIAASSSLDAHIRLWDLESGKQIKSMDAGPVDAWTVAFSPDSKY
IATGSHLGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG
KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAF
SPDDTHFVSSSSDKSVKVWDASSRACINTFFDHQDQVTKTTLLLFTECVTIKFKISGSRR
LRGVGSVLQQNL
NT seq 939 nt   +upstreamnt  +downstreamnt
atgagcactcaatatagcatccttttcaagcaagagcatgcacatgaagatgccatctgg
acggcagcgtggggtaaaagtgaggcggacgggtcagaaaccatcgtcactggctcgcta
gatgatatggtgaaagtctggaaatggtcagacgagaagctggagctgcagtggactctg
gagggacaccagctgggtgtggtgtcggtggacatcagtcacaacggagccatcgctgcc
tccagctcccttgacgcccacatccgtctctgggacctggagtctggaaaacagatcaag
tctatggacgccggaccagttgatgcatggacagttgccttctccccagactctaaatac
atcgccacaggaagtcatcttggcaaggtcaacatctttggtgtggaaagtggcaagaag
gaatattctctggacacccgagggaaattcatcctgagtatagcttacagccctgacgga
aagtatctggccagcggagctatcgatggaatcatcaacatctttgacatcgccactgga
aagctactccacacactggaaggtcacgccatgcccatcagatccctcaccttctcccct
gactcccagctcctcgtcacagcctcagacgacggctacattaagatatatgatgtgcaa
catgccaacctggccggtacactgagtggacatgggtcctgggttcttaatgtcgcattc
tccccagatgacacgcactttgtctcgagctcatctgacaagagcgtgaaggtttgggac
gccagctccagagcatgtatcaacactttcttcgaccatcaagatcaggtgacaaagacg
accctgcttctcttcactgagtgtgttacaatcaaattcaaaatctctggtagcagacgc
ctgcggggagttggatctgttctgcaacaaaacctctga

DBGET integrated database retrieval system